IGSF8

General Information

Gene Name       : IGSF8
Gene ID             : ENSG00000162729.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: IGSF8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878IGSF8ENSG00000162729.130.682.731.71ENCSR000AEF
HepG2IGSF8ENSG00000162729.1342.798.4625.62ENCSR985KAT
K562IGSF8ENSG00000162729.134.262.063.16ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for IGSF8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • IGSF8 RNA is bound by 12 proteins.  







eCLIP assay for IGSF8 is not avaliable on ENCORE database.





12 proteins are bound to IGSF8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1160061308160061373-3'-UTR,intron-Distal4.8086725.46727HepG2PCBP2
chr1160061280160061308-3'-UTR,intron-Distal4.110229.50194HepG2PCBP2
chr1160061189160061212-3'-UTR,intron-Distal4.9069214.62554HepG2PCBP2
chr1160061212160061265-3'-UTR,intron-Distal5.8140977.87403HepG2PCBP2
chr1160061350160061393-3'-UTR,intron-Distal3.371975.80891HepG2LARP4
chr1160061180160061260-3'-UTR,intron-Distal4.0797311.29625HepG2DDX59
chr1160061231160061302-3'-UTR,intron-Distal5.084075.20569HepG2PCBP1
chr1160061215160061285-3'-UTR,intron-Distal4.397864.76405HepG2ILF3
chr1160061256160061312-3'-UTR,intron-Distal3.6128412.79542HepG2LARP4
chr1160061160160061189-3'-UTR,intron-Distal5.6819214.08485HepG2PCBP2
chr1160061265160061280-3'-UTR,intron-Distal4.6523819.41291HepG2PCBP2
chr1160068196160068285-5'-UTR,CDS,intron-Distal,intron-Proximal3.7049213.13583HepG2DDX3X
chr1160062103160062174-CDS,intron-Distal3.452184.79877HepG2SND1
chr1160062422160062481-CDS,intron-Distal4.520935.51172HepG2SND1
chr1160062135160062185-CDS,intron-Distal5.122807.15341HepG2RPS3
chr1160062218160062321-CDS,intron-Distal6.3793711.52157HepG2SND1
chr1160062754160062784-CDS,intron-Distal3.834953.85049HepG2SND1
chr1160064908160065037-CDS,intron-Distal,intron-Proximal4.2005511.38001HepG2DDX3X
chr1160064986160065024-CDS,intron-Distal3.622805.92869HepG2RPS3
chr1160062946160062995-CDS,intron-Distal3.952185.56131HepG2SND1
chr1160064611160064669-CDS,intron-Distal,intron-Proximal3.622406.86197HepG2PRPF8
chr1160062350160062403-CDS,intron-Distal4.175567.21038HepG2SND1
chr1160062475160062500-CDS,intron-Distal,intron-Proximal5.6994610.52887K562SF3B4
chr1160062246160062279-CDS,intron-Distal3.187273.54552HepG2LARP4
chr1160063408160063478-intron-Distal,intron-Proximal5.363885.24235HepG2EFTUD2
chr1160062486160062533-intron-Distal,intron-Proximal3.228105.25867HepG2SF3B4
chr1160067371160067476-intron-Distal4.386284.70434HepG2RBFOX2
chr1160061823160061877-intron-Distal,intron-Proximal4.212083.97974HepG2RBFOX2
chr1160062500160062534-intron-Distal,intron-Proximal4.8853310.52912K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for IGSF8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for IGSF8 is not available on ENCORE database.

  • 91 RBPs can affect the levels of IGSF8.  








The Knockdown/knockout RNA-Seq assay for IGSF8 is not available on ENCORE database.





91 RBPs can affect the gene expression of IGSF8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
IGSF8ENSG00000162729.9582.36470997.33200-0.776203.529502.46990HepG2ABCF1
IGSF8ENSG00000162729.91518.556601010.062700.588201.783101.34620HepG2AKAP1
IGSF8ENSG00000162729.91147.13620809.210000.503403.577602.39910HepG2AKAP8
IGSF8ENSG00000162729.9793.05480399.753400.988204.838703.67940HepG2BCLAF1
IGSF8ENSG00000162729.9313.81470717.77540-1.1936016.6081015.32040HepG2BOP1
IGSF8ENSG00000162729.91247.45350820.837900.603705.630304.09120HepG2CPSF7
IGSF8ENSG00000162729.9586.97200433.341200.437703.623602.45840HepG2YBX3
IGSF8ENSG00000162729.91493.54630586.686701.3480013.4831012.27380HepG2CELF1
IGSF8ENSG00000162729.9788.38770630.931900.321302.452901.74930HepG2DAZAP1
IGSF8ENSG00000162729.9675.22680809.06420-0.260902.339901.56890HepG2DDX19B
IGSF8ENSG00000162729.9827.85810551.627100.585604.273402.62380HepG2DDX52
IGSF8ENSG00000162729.91236.46440452.553101.4500014.9733013.36430HepG2DDX55
IGSF8ENSG00000162729.92962.72360831.558901.8329013.9910012.73660HepG2DDX6
IGSF8ENSG00000162729.9605.48950836.95420-0.467005.235304.35700HepG2DKC1
IGSF8ENSG00000162729.9871.64050425.475301.0346013.6915012.22310HepG2DNAJC21
IGSF8ENSG00000162729.9843.41830421.766500.999707.935806.90380HepG2DNAJC2
IGSF8ENSG00000162729.91568.13880798.770100.973104.282803.55400HepG2EIF2S1
IGSF8ENSG00000162729.9387.92790622.36720-0.682005.492104.37860HepG2EIF4G1
IGSF8ENSG00000162729.9779.37460596.203400.386402.387101.62880HepG2EIF4G2
IGSF8ENSG00000162729.9628.53020863.63070-0.458402.490301.45380HepG2ESF1
IGSF8ENSG00000162729.9527.53540854.82040-0.696408.336906.89800HepG2EWSR1
IGSF8ENSG00000162729.9778.86910477.494500.705806.058604.29010HepG2FAM120A
IGSF8ENSG00000162729.9399.45850660.08600-0.724602.555101.58170HepG2FTO
IGSF8ENSG00000162729.91170.59510848.004900.465003.131102.29870HepG2FUBP3
IGSF8ENSG00000162729.9778.56790443.554700.811602.466401.41030HepG2FUS
IGSF8ENSG00000162729.91379.44820835.178200.7238016.0284014.00420HepG2HDGF
IGSF8ENSG00000162729.91285.76330574.760901.1615038.8644036.68890HepG2HNRNPL
IGSF8ENSG00000162729.9663.85290474.653000.483905.230304.41750HepG2HNRNPU
IGSF8ENSG00000162729.9500.28590696.36640-0.477103.839602.99730HepG2IGF2BP1
IGSF8ENSG00000162729.9731.94750484.839600.594108.830207.59310HepG2ILF2
IGSF8ENSG00000162729.9971.94280799.670200.281402.946401.89890HepG2KIF1C
IGSF8ENSG00000162729.9711.19650392.297000.858208.831806.92140HepG2LARP7
IGSF8ENSG00000162729.9878.77900558.848600.652903.709402.49800HepG2METAP2
IGSF8ENSG00000162729.9907.30760684.067600.407402.653801.46420HepG2NAA15
IGSF8ENSG00000162729.9983.59270625.625500.652704.531203.55720HepG2NOL12
IGSF8ENSG00000162729.9454.55030632.08330-0.475702.979902.20400HepG2NSUN2
IGSF8ENSG00000162729.9777.71900398.617200.964104.318301.84710HepG2NUSAP1
IGSF8ENSG00000162729.92205.85000670.366001.7182015.5602013.39990HepG2PABPC1
IGSF8ENSG00000162729.9723.57730469.805200.623007.927106.61080HepG2PARN
IGSF8ENSG00000162729.91323.85820780.454900.7623016.9662015.66900HepG2PCBP1
IGSF8ENSG00000162729.9890.45800423.349801.072604.215803.32650HepG2PPIL4
IGSF8ENSG00000162729.91075.71330794.176700.437705.245104.54160HepG2PTBP1
IGSF8ENSG00000162729.9746.79390597.186600.322401.879401.37440HepG2PUF60
IGSF8ENSG00000162729.91470.76550633.907501.2141046.9775045.14550HepG2PUM1
IGSF8ENSG00000162729.91247.58480633.464600.977706.249305.25500HepG2PUM2
IGSF8ENSG00000162729.91740.010701073.649700.6965012.0093010.41810HepG2RBM15
IGSF8ENSG00000162729.9579.722901057.38280-0.8671015.4450014.42210HepG2RBM22
IGSF8ENSG00000162729.91481.90040780.568600.924803.719402.94490HepG2RBM25
IGSF8ENSG00000162729.9741.98930473.069900.649204.678203.36660HepG2RBM27
IGSF8ENSG00000162729.9607.22980883.81360-0.541506.352705.58910HepG2NELFE
IGSF8ENSG00000162729.9257.52420761.72530-1.5646026.6034024.95070HepG2RPLP0
IGSF8ENSG00000162729.9706.07050445.365600.664704.622603.21910HepG2RPS5
IGSF8ENSG00000162729.9924.94570422.690101.1297028.3872026.63300HepG2SAFB2
IGSF8ENSG00000162729.9558.47860705.58800-0.337301.893301.30150HepG2SF3B1
IGSF8ENSG00000162729.91060.23540572.542300.8888016.3288014.88320HepG2SLBP
IGSF8ENSG00000162729.9907.89510492.912100.8811019.2416017.78000HepG2SMN1
IGSF8ENSG00000162729.9809.50930414.448500.965803.794002.65990HepG2SMNDC1
IGSF8ENSG00000162729.9422.82270863.00290-1.0293019.6575018.63870HepG2SRSF1
IGSF8ENSG00000162729.9552.77590759.21370-0.457802.390401.46810HepG2SRSF3
IGSF8ENSG00000162729.91307.63490589.595901.1491032.8413031.02720HepG2SRSF5
IGSF8ENSG00000162729.9520.823201036.84070-0.9933023.7165022.54130HepG2SSB
IGSF8ENSG00000162729.91286.92860641.974101.003203.416102.18120HepG2STIP1
IGSF8ENSG00000162729.91205.49740670.566300.8461015.9954014.69870HepG2SUCLG1
IGSF8ENSG00000162729.91074.77320679.569700.661206.980905.53620HepG2SUPT6H
IGSF8ENSG00000162729.91062.35590694.812500.612506.249405.21960HepG2TARDBP
IGSF8ENSG00000162729.9593.20550301.821300.974703.391402.29660HepG2TFIP11
IGSF8ENSG00000162729.91062.46060712.753200.575803.106202.22610HepG2TIA1
IGSF8ENSG00000162729.91558.19990465.340901.7434079.0556076.65150HepG2TRIM56
IGSF8ENSG00000162729.91173.11090583.373101.007703.627002.61250HepG2TUFM
IGSF8ENSG00000162729.91244.60480551.916301.173103.702802.55380HepG2U2AF2
IGSF8ENSG00000162729.91258.59890617.456401.027303.349102.42930HepG2UBE2L3
IGSF8ENSG00000162729.9329.03680537.46740-0.707908.414107.34980HepG2ZC3H8
IGSF8ENSG00000162729.91249.80910763.807000.7103017.2702016.19560HepG2ZNF622
IGSF8ENSG00000162729.9527.57940290.509400.8607010.753609.72800K562AGGF1
IGSF8ENSG00000162729.9476.83490302.293200.657404.515603.67300K562AKAP8L
IGSF8ENSG00000162729.9144.55930257.45150-0.832604.450002.82040K562APOBEC3C
IGSF8ENSG00000162729.9144.20680228.58320-0.664602.426501.87110K562AQR
IGSF8ENSG00000162729.9156.35480260.73920-0.737802.969601.86280K562CNOT7
IGSF8ENSG00000162729.9296.33160203.757400.540303.131901.94860K562CPEB4
IGSF8ENSG00000162729.9196.79460358.83100-0.866607.105505.56520K562CELF1
IGSF8ENSG00000162729.9273.32920158.602600.785105.179003.69210K562DDX3X
IGSF8ENSG00000162729.9234.58550160.798900.544802.770301.46370K562DDX6
IGSF8ENSG00000162729.9288.98930130.951501.1419010.215908.96830K562EIF2S2
IGSF8ENSG00000162729.9208.27670291.78000-0.486402.524701.62350K562EIF4G2
IGSF8ENSG00000162729.9100.19620172.31550-0.782203.694903.01060K562FXR1
IGSF8ENSG00000162729.9198.9580070.514701.496404.825103.31010K562IGF2BP2
IGSF8ENSG00000162729.9553.02130359.369300.621805.395104.03970K562MBNL1
IGSF8ENSG00000162729.9223.88650310.99780-0.474102.371001.32930K562MSI2
IGSF8ENSG00000162729.9211.70030319.18320-0.592403.311401.66400K562NOL12
IGSF8ENSG00000162729.943.88440141.26800-1.686708.524107.06670K562PCBP3
IGSF8ENSG00000162729.938.30730108.35570-1.500106.443305.22760K562POLR2G
IGSF8ENSG00000162729.9196.71900119.482100.719202.974002.03120K562PSIP1
IGSF8ENSG00000162729.9176.98270318.34540-0.847004.805903.73320K562PUF60
IGSF8ENSG00000162729.9245.73370338.67140-0.462802.689701.63860K562PUM1
IGSF8ENSG00000162729.9445.63180292.096800.609303.054202.43650K562RBM15
IGSF8ENSG00000162729.9160.4596066.626401.267904.326002.96690K562SRSF5
IGSF8ENSG00000162729.963.38730108.68590-0.777902.524801.74240K562SYNCRIP
IGSF8ENSG00000162729.9130.0483071.355300.865902.917802.19170K562TARDBP
IGSF8ENSG00000162729.9196.7542068.835301.5151010.944309.19660K562TIA1
IGSF8ENSG00000162729.9162.8216067.593501.268206.751004.85990K562TRA2A
IGSF8ENSG00000162729.9140.08980217.96070-0.637703.653502.69010K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for IGSF8 is not available on ENCORE database.





1 RBPs can affect the splicing of IGSF8 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSIGSF8ENSG00000162729.9chr1-1600611291600614211600611291600613981600615971600617280.063000.000520.01560longerHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for IGSF8 is not avaliable on ENCORE database.