HLA-C

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HLA-C	ENSG00000204525.16	190.04	232.14	211.09	ENCSR000AEF
HepG2	HLA-C	ENSG00000204525.16	117.56	58.26	87.91	ENCSR985KAT
K562	HLA-C	ENSG00000204525.16	0.77	0.79	0.78	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HLA-C is not avaliable on ENCORE database.

Proteins bound to RNA

HLA-C RNA is bound by 12 proteins.

eCLIP assay for HLA-C is not avaliable on ENCORE database.

12 proteins are bound to HLA-C RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	31237274	31237301	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.89224	6.50179	HepG2	BUD13
chr6	31236808	31236834	-	3'-UTR,intron-Distal	4.24613	43.93207	HepG2	PCBP2
chr6	31236721	31236762	-	3'-UTR,intron-Distal	3.36061	19.15715	HepG2	ILF3
chr6	31236901	31236951	-	3'-UTR,CDS,intron-Distal	3.77553	24.48907	HepG2	LARP4
chr6	31236914	31236951	-	3'-UTR,CDS,intron-Distal	4.65448	25.24778	HepG2	RPS3
chr6	31236753	31236794	-	3'-UTR,intron-Distal	3.94051	25.94371	HepG2	LIN28B
chr6	31237114	31237150	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.50616	23.33437	HepG2	RPS3
chr6	31238081	31238132	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.81808	28.30176	HepG2	SND1
chr6	31237742	31237748	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.50449	13.23159	HepG2	LARP4
chr6	31237803	31237825	-	3'-UTR,CDS,intron-Distal	3.99884	6.43771	HepG2	RPS3
chr6	31236794	31236827	-	3'-UTR,intron-Distal	4.51081	25.18573	HepG2	LIN28B
chr6	31237269	31237303	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.59907	17.12216	HepG2	RPS3
chr6	31237114	31237148	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.98620	18.35981	HepG2	LARP4
chr6	31237295	31237302	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.89540	22.81761	HepG2	SND1
chr6	31236759	31236769	-	3'-UTR,intron-Distal	6.83181	400.00000	HepG2	PCBP2
chr6	31236774	31236832	-	3'-UTR,intron-Distal	3.06475	18.07872	HepG2	ILF3
chr6	31237272	31237302	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.04190	20.35486	HepG2	LARP4
chr6	31238089	31238127	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.04036	12.11309	HepG2	RPS3
chr6	31237742	31237756	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.11003	8.51824	HepG2	RPS3
chr6	31236728	31236824	-	3'-UTR,intron-Distal	4.03224	23.07017	HepG2	PCBP1
chr6	31236777	31236784	-	3'-UTR,intron-Distal	6.25130	400.00000	HepG2	PCBP2
chr6	31236769	31236777	-	3'-UTR,intron-Distal	6.64963	400.00000	HepG2	PCBP2
chr6	31236657	31236684	-	3'-UTR,intron-Distal	3.38331	7.47998	HepG2	LARP4
chr6	31236784	31236808	-	3'-UTR,intron-Distal	5.42882	400.00000	HepG2	PCBP2
chr6	31236720	31236767	-	3'-UTR,intron-Distal	4.17528	28.59472	HepG2	LARP4
chr6	31236773	31236857	-	3'-UTR,intron-Distal	3.80912	69.35711	HepG2	LARP4
chr6	31237271	31237295	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.25877	16.84839	HepG2	SND1
chr6	31237748	31237765	-	3'-UTR,CDS,intron-Distal	3.39744	11.86697	HepG2	LARP4
chr6	31236708	31236767	-	3'-UTR,intron-Distal	3.98178	3.45012	HepG2	UPF1
chr6	31236860	31236901	-	3'-UTR,intron-Distal	3.11911	13.57222	HepG2	LARP4
chr6	31237742	31237758	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.87840	16.81720	HepG2	SND1
chr6	31237792	31237828	-	3'-UTR,CDS,intron-Distal	3.97488	13.96409	HepG2	SND1
chr6	31236718	31236759	-	3'-UTR,intron-Distal	6.99503	400.00000	HepG2	PCBP2
chr6	31239037	31239112	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.83778	61.43071	HepG2	SND1
chr6	31238881	31238953	-	5'-UTR,CDS,intron-Distal	5.06612	400.00000	HepG2	SND1
chr6	31239042	31239103	-	5'-UTR,CDS,intron-Distal	3.82815	22.12751	HepG2	RPS3
chr6	31238887	31238947	-	5'-UTR,CDS,intron-Distal	4.49808	30.90073	HepG2	RPS3
chr6	31239775	31239854	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.46841	31.58526	HepG2	DDX3X
chr6	31238889	31238928	-	5'-UTR,CDS,intron-Distal	4.19582	11.35341	HepG2	LARP4
chr6	31239435	31239539	-	CDS,intron-Distal	3.03630	6.79436	HepG2	NOL12
chr6	31239497	31239530	-	CDS,intron-Distal	3.30743	13.57744	HepG2	SND1
chr6	31239455	31239464	-	CDS,intron-Distal	3.07313	3.29945	HepG2	LIN28B
chr6	31239776	31239818	-	CDS,intron-Distal	4.22123	14.60373	HepG2	RPS3
chr6	31239434	31239541	-	CDS,intron-Distal	4.18403	27.06973	HepG2	RPS3
chr6	31239472	31239496	-	CDS,intron-Distal	3.10549	16.43294	HepG2	SND1
chr6	31239630	31239645	-	CDS,intron-Distal	4.22853	17.67892	HepG2	DDX3X
chr6	31239068	31239141	-	CDS,intron-Distal,intron-Proximal	4.58775	5.25202	HepG2	AQR
chr6	31239587	31239623	-	CDS,intron-Distal	4.16935	12.18649	HepG2	RPS3
chr6	31239450	31239472	-	CDS,intron-Distal	3.23005	20.74307	HepG2	SND1
chr6	31239407	31239450	-	CDS,intron-Distal	3.55172	24.45547	HepG2	SND1
chr6	31239576	31239627	-	CDS,intron-Distal	3.63150	13.27969	HepG2	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for HLA-C is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for HLA-C is not available on ENCORE database.
122 RBPs can affect the levels of HLA-C.

The Knockdown/knockout RNA-Seq assay for HLA-C is not available on ENCORE database.

122 RBPs can affect the gene expression of HLA-C :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HLA-C	ENSG00000204525.10	847.92190	1384.97440	-0.70790	5.55910	4.08640	HepG2	AATF
HLA-C	ENSG00000204525.10	1819.66490	1310.69650	0.47320	4.55980	3.31900	HepG2	ADAR
HLA-C	ENSG00000204525.10	5723.16860	3906.80400	0.55070	5.47370	4.03140	HepG2	AKAP8
HLA-C	ENSG00000204525.10	3405.57740	2495.08060	0.44870	4.20120	3.24230	HepG2	ASCC1
HLA-C	ENSG00000204525.10	5027.76530	3878.90410	0.37420	3.31220	1.78360	HepG2	ATP5C1
HLA-C	ENSG00000204525.10	3091.91510	2493.27790	0.31040	2.52590	1.86520	HepG2	AUH
HLA-C	ENSG00000204525.10	1646.50900	1029.66750	0.67710	6.21620	4.93310	HepG2	BCLAF1
HLA-C	ENSG00000204525.10	4566.67390	1986.87120	1.20050	25.51420	23.99920	HepG2	BOP1
HLA-C	ENSG00000204525.10	5272.92450	3220.99730	0.71100	13.19870	10.73910	HepG2	BUD13
HLA-C	ENSG00000204525.10	5517.76590	3585.70720	0.62170	3.25720	2.19410	HepG2	CCAR1
HLA-C	ENSG00000204525.10	3670.95270	2370.54540	0.63080	8.15940	6.88760	HepG2	CIRBP
HLA-C	ENSG00000204525.10	2375.08510	2745.10320	-0.20890	2.25310	1.64320	HepG2	CKAP4
HLA-C	ENSG00000204525.10	3595.61080	1823.98770	0.97900	19.78730	18.15850	HepG2	CPSF6
HLA-C	ENSG00000204525.10	4375.66810	3540.24720	0.30560	2.74010	1.63940	HepG2	CPSF7
HLA-C	ENSG00000204525.10	2650.10350	1828.54910	0.53520	5.91850	5.04560	HepG2	CELF1
HLA-C	ENSG00000204525.10	2669.26440	1965.98950	0.44110	11.29720	9.96130	HepG2	DAZAP1
HLA-C	ENSG00000204525.10	1980.38580	1345.96430	0.55700	7.39510	5.62510	HepG2	DDX1
HLA-C	ENSG00000204525.10	5458.09080	2888.48580	0.91800	15.60010	14.23710	HepG2	DDX3X
HLA-C	ENSG00000204525.10	5614.47720	4193.88280	0.42080	3.15780	1.78130	HepG2	DDX47
HLA-C	ENSG00000204525.10	2270.66830	1688.76080	0.42710	2.81980	1.45260	HepG2	DDX52
HLA-C	ENSG00000204525.10	1536.18540	1165.33680	0.39850	2.04410	1.36940	HepG2	DDX55
HLA-C	ENSG00000204525.10	5317.41330	2482.00430	1.09910	18.87450	17.45360	HepG2	DDX6
HLA-C	ENSG00000204525.10	1996.37680	1272.94270	0.64910	9.37860	7.68900	HepG2	DHX30
HLA-C	ENSG00000204525.10	3989.56810	2627.18580	0.60260	17.87570	16.49190	HepG2	DKC1
HLA-C	ENSG00000204525.10	2009.42760	1319.78220	0.60640	3.09120	2.35220	HepG2	DNAJC21
HLA-C	ENSG00000204525.10	1651.49310	1308.18680	0.33610	5.46170	4.59090	HepG2	DNAJC2
HLA-C	ENSG00000204525.10	2782.56160	2014.42650	0.46590	2.84380	1.91120	HepG2	EEF2
HLA-C	ENSG00000204525.10	4543.15060	2385.28120	0.92940	11.10670	9.96660	HepG2	EIF2S1
HLA-C	ENSG00000204525.10	2750.25990	3613.06290	-0.39370	3.21970	1.33700	HepG2	EIF3H
HLA-C	ENSG00000204525.10	1595.09370	2566.86170	-0.68640	4.02080	3.19880	HepG2	EIF4B
HLA-C	ENSG00000204525.10	2659.52300	1858.08370	0.51730	5.33770	4.22700	HepG2	EIF4G2
HLA-C	ENSG00000204525.10	2394.08180	1461.81580	0.71160	5.63430	3.92530	HepG2	FAM120A
HLA-C	ENSG00000204525.10	2689.63490	3208.09950	-0.25430	2.23370	1.51990	HepG2	FUBP3
HLA-C	ENSG00000204525.10	2082.90970	1455.67020	0.51680	3.01880	2.08010	HepG2	GEMIN5
HLA-C	ENSG00000204525.10	2716.72560	2067.44510	0.39390	2.94940	2.29050	HepG2	GPKOW
HLA-C	ENSG00000204525.10	1798.91070	1332.42670	0.43300	4.41580	3.62470	HepG2	HNRNPA1
HLA-C	ENSG00000204525.10	3117.30540	1827.32890	0.77050	23.88780	22.06820	HepG2	HNRNPF
HLA-C	ENSG00000204525.10	1554.46400	1790.82050	-0.20420	2.36270	1.73360	HepG2	HNRNPL
HLA-C	ENSG00000204525.10	3804.45780	1973.01790	0.94720	17.56230	16.17330	HepG2	HNRNPLL
HLA-C	ENSG00000204525.10	2317.36220	2995.18200	-0.37020	4.04370	2.91340	HepG2	HNRNPM
HLA-C	ENSG00000204525.10	1804.78440	1472.29770	0.29370	3.83090	3.12800	HepG2	HNRNPU
HLA-C	ENSG00000204525.10	3805.87250	1799.37800	1.08060	32.55970	30.44760	HepG2	IGF2BP1
HLA-C	ENSG00000204525.10	3235.88140	2507.75180	0.36770	3.06860	2.36200	HepG2	IGF2BP2
HLA-C	ENSG00000204525.10	2067.80140	1503.90000	0.45930	11.30050	9.92700	HepG2	ILF2
HLA-C	ENSG00000204525.10	3355.18680	2510.03750	0.41860	10.28340	8.43480	HepG2	KIF1C
HLA-C	ENSG00000204525.10	6268.72290	4250.46880	0.56040	4.09120	2.56140	HepG2	KRR1
HLA-C	ENSG00000204525.10	2075.58960	2675.99640	-0.36660	2.58850	1.97680	HepG2	MATR3
HLA-C	ENSG00000204525.10	3759.98630	2012.63080	0.90150	9.04470	7.26440	HepG2	MTPAP
HLA-C	ENSG00000204525.10	4177.43410	2738.88990	0.60890	6.85480	5.87870	HepG2	NCBP2
HLA-C	ENSG00000204525.10	2882.54940	1949.47910	0.56420	6.51510	5.34970	HepG2	NOL12
HLA-C	ENSG00000204525.10	1735.78470	1070.46530	0.69720	2.90480	1.78290	HepG2	NONO
HLA-C	ENSG00000204525.10	2601.02560	1749.59350	0.57200	7.25820	6.08290	HepG2	NSUN2
HLA-C	ENSG00000204525.10	3136.44210	2438.51120	0.36300	2.07170	1.43900	HepG2	PABPC4
HLA-C	ENSG00000204525.10	3479.43620	2611.30310	0.41400	3.93180	1.88040	HepG2	PES1
HLA-C	ENSG00000204525.10	2942.62470	1313.16850	1.16400	27.49600	25.36260	HepG2	PPIL4
HLA-C	ENSG00000204525.10	2543.91500	1978.81710	0.36230	6.06100	4.96400	HepG2	PRPF4
HLA-C	ENSG00000204525.10	1166.68640	898.55540	0.37660	2.06790	1.36560	HepG2	PRPF8
HLA-C	ENSG00000204525.10	1748.48570	2609.99550	-0.57790	14.88090	13.80860	HepG2	PTBP1
HLA-C	ENSG00000204525.10	2859.97510	1860.98990	0.61980	10.08540	9.04570	HepG2	PUF60
HLA-C	ENSG00000204525.10	3057.57340	1974.09830	0.63110	12.79190	11.41020	HepG2	PUM2
HLA-C	ENSG00000204525.10	857.72480	1403.87030	-0.71080	2.01260	1.40170	HepG2	RAVER1
HLA-C	ENSG00000204525.10	1052.90150	2392.65210	-1.18420	41.77120	40.22500	HepG2	RBM22
HLA-C	ENSG00000204525.10	1973.86190	1260.06690	0.64740	6.26220	4.66500	HepG2	RCC2
HLA-C	ENSG00000204525.10	2501.02390	2904.71080	-0.21590	2.69800	2.16220	HepG2	NELFE
HLA-C	ENSG00000204525.10	2387.34050	2705.27740	-0.18040	2.01490	1.47740	HepG2	RECQL
HLA-C	ENSG00000204525.10	3148.27950	1968.77000	0.67720	5.77180	4.83720	HepG2	RPLP0
HLA-C	ENSG00000204525.10	2415.17480	1380.29170	0.80710	5.83590	4.49410	HepG2	RPS10
HLA-C	ENSG00000204525.10	2511.76310	1687.58860	0.57360	2.02980	1.34480	HepG2	RPS3A
HLA-C	ENSG00000204525.10	2593.00120	1311.13470	0.98370	34.70620	32.80180	HepG2	SAFB2
HLA-C	ENSG00000204525.10	4582.76220	3386.95390	0.43610	2.41380	1.78520	HepG2	SF3A3
HLA-C	ENSG00000204525.10	2621.43080	1952.78990	0.42470	3.59220	2.79670	HepG2	SF3B1
HLA-C	ENSG00000204525.10	2105.28380	2717.42070	-0.36820	5.26050	4.49000	HepG2	SF3B4
HLA-C	ENSG00000204525.10	3167.66760	1784.49880	0.82780	38.26150	36.29570	HepG2	SLBP
HLA-C	ENSG00000204525.10	1779.17170	1528.98520	0.21850	2.87860	2.22330	HepG2	SMN1
HLA-C	ENSG00000204525.10	2279.19510	1369.65280	0.73460	3.36790	1.59830	HepG2	SND1
HLA-C	ENSG00000204525.10	4225.88080	2172.86000	0.95960	9.83960	8.37450	HepG2	SNRNP70
HLA-C	ENSG00000204525.10	1115.00220	2702.39230	-1.27720	66.93690	65.31860	HepG2	SRFBP1
HLA-C	ENSG00000204525.10	1158.98570	2836.36690	-1.29120	65.43160	63.82680	HepG2	SRSF1
HLA-C	ENSG00000204525.10	3246.11620	1837.51460	0.82090	18.03490	16.63270	HepG2	SRSF5
HLA-C	ENSG00000204525.10	3019.60140	1795.35710	0.75000	22.85830	21.22310	HepG2	SRSF7
HLA-C	ENSG00000204525.10	3179.47600	2346.28120	0.43830	9.93970	9.08360	HepG2	SSB
HLA-C	ENSG00000204525.10	2556.26540	1468.77590	0.79930	4.24400	2.84910	HepG2	STIP1
HLA-C	ENSG00000204525.10	1648.63270	2089.71050	-0.34200	5.51280	4.68980	HepG2	SUCLG1
HLA-C	ENSG00000204525.10	4348.67550	2931.03150	0.56910	7.25490	5.78490	HepG2	SUPT6H
HLA-C	ENSG00000204525.10	1987.49800	1159.95660	0.77680	7.84560	6.80090	HepG2	SUPV3L1
HLA-C	ENSG00000204525.10	1789.04110	2549.34820	-0.51090	6.05180	5.27610	HepG2	TAF15
HLA-C	ENSG00000204525.10	6063.91240	1923.57770	1.65640	55.88310	53.41710	HepG2	TARDBP
HLA-C	ENSG00000204525.10	2152.43990	1430.53910	0.58930	10.32420	9.46520	HepG2	TIAL1
HLA-C	ENSG00000204525.10	2744.77260	1443.40570	0.92710	35.71690	33.97890	HepG2	TRIM56
HLA-C	ENSG00000204525.10	2647.58730	1818.18750	0.54210	4.15620	3.05930	HepG2	TUFM
HLA-C	ENSG00000204525.10	2943.71860	3713.79980	-0.33530	2.99860	2.34540	HepG2	U2AF1
HLA-C	ENSG00000204525.10	3116.91490	1924.57490	0.69550	8.63530	7.12720	HepG2	UBE2L3
HLA-C	ENSG00000204525.10	4660.94830	3003.70880	0.63380	23.19330	21.55840	HepG2	UPF1
HLA-C	ENSG00000204525.10	3796.71450	3087.40390	0.29830	4.62800	3.31200	HepG2	UTP18
HLA-C	ENSG00000204525.10	2777.77950	1511.70060	0.87770	5.00710	3.51700	HepG2	XPO5
HLA-C	ENSG00000204525.10	1858.62260	1141.85360	0.70280	7.20820	6.05080	HepG2	XRN2
HLA-C	ENSG00000204525.10	6236.45530	3303.50680	0.91660	65.00390	63.27340	HepG2	ZNF622
HLA-C	ENSG00000204525.10	196.40740	75.23650	1.38420	10.02990	9.03690	K562	AGGF1
HLA-C	ENSG00000204525.10	157.59280	82.68330	0.93040	4.63990	3.28670	K562	AKAP8
HLA-C	ENSG00000204525.10	182.39090	78.28940	1.22000	7.49870	6.37780	K562	AKAP8L
HLA-C	ENSG00000204525.10	190.35630	82.14900	1.21230	8.55880	6.82720	K562	ATP5C1
HLA-C	ENSG00000204525.10	81.91820	42.27600	0.95420	2.32340	1.53040	K562	BOP1
HLA-C	ENSG00000204525.10	96.35870	29.85240	1.69050	7.26570	5.34610	K562	CCAR1
HLA-C	ENSG00000204525.10	144.39120	72.68260	0.99020	2.58230	1.56340	K562	CNOT7
HLA-C	ENSG00000204525.10	95.29770	54.61210	0.80310	2.30170	1.30220	K562	CPEB4
HLA-C	ENSG00000204525.10	99.05620	44.94600	1.14000	3.77580	2.86020	K562	CPSF6
HLA-C	ENSG00000204525.10	39.64200	14.56850	1.44410	2.50700	1.50830	K562	CSTF2
HLA-C	ENSG00000204525.10	87.26590	46.90630	0.89550	2.69770	1.66840	K562	DDX3X
HLA-C	ENSG00000204525.10	137.52840	84.23000	0.70720	2.94930	2.04100	K562	DKC1
HLA-C	ENSG00000204525.10	120.02080	33.83020	1.82680	9.63480	8.41650	K562	EIF2S2
HLA-C	ENSG00000204525.10	88.00870	30.36190	1.53530	4.28430	3.00640	K562	EIF3A
HLA-C	ENSG00000204525.10	103.81550	38.10680	1.44580	4.79760	3.65960	K562	FIP1L1
HLA-C	ENSG00000204525.10	143.89150	42.90790	1.74560	9.30640	7.84270	K562	GPKOW
HLA-C	ENSG00000204525.10	159.32810	45.08120	1.82130	9.61060	8.17670	K562	GRSF1
HLA-C	ENSG00000204525.10	197.23590	92.95140	1.08530	3.98050	2.43410	K562	HNRNPA2B1
HLA-C	ENSG00000204525.10	104.94440	45.15590	1.21650	4.17510	3.45700	K562	HNRNPC
HLA-C	ENSG00000204525.10	98.18730	59.92530	0.71230	2.13120	1.34860	K562	HNRNPU
HLA-C	ENSG00000204525.10	144.66590	51.67210	1.48520	3.82040	2.88950	K562	HSPD1
HLA-C	ENSG00000204525.10	63.61070	23.17520	1.45660	3.54890	2.33130	K562	IGF2BP2
HLA-C	ENSG00000204525.10	140.70220	83.07620	0.76000	3.31910	2.40610	K562	KIF1C
HLA-C	ENSG00000204525.10	130.93960	79.53120	0.71920	2.66580	1.61490	K562	MAK16
HLA-C	ENSG00000204525.10	163.29190	93.06750	0.81100	3.88890	2.78120	K562	MBNL1
HLA-C	ENSG00000204525.10	141.41780	65.23430	1.11620	4.26030	3.09600	K562	NAA15
HLA-C	ENSG00000204525.10	79.87120	43.25130	0.88480	2.30860	1.56040	K562	PPIG
HLA-C	ENSG00000204525.10	118.10970	40.48770	1.54450	6.45080	4.97730	K562	PSIP1
HLA-C	ENSG00000204525.10	104.50370	54.96270	0.92690	2.43030	1.66720	K562	PUF60
HLA-C	ENSG00000204525.10	198.66610	77.62450	1.35570	8.29230	7.40040	K562	PUS1
HLA-C	ENSG00000204525.10	170.79280	75.64760	1.17480	6.92760	6.01740	K562	RBM15
HLA-C	ENSG00000204525.10	274.63700	100.06630	1.45650	6.46670	3.83020	K562	RBM39
HLA-C	ENSG00000204525.10	60.30050	17.07160	1.82050	4.11180	3.11360	K562	RPS19
HLA-C	ENSG00000204525.10	170.53570	85.41660	0.99740	3.12640	1.79090	K562	SNRNP200
HLA-C	ENSG00000204525.10	54.78790	22.58790	1.27820	2.91270	2.07040	K562	TIA1
HLA-C	ENSG00000204525.10	106.15840	38.94200	1.44670	5.18560	3.86310	K562	TIAL1
HLA-C	ENSG00000204525.10	95.25840	41.37470	1.20300	3.97580	2.79880	K562	TRIM56
HLA-C	ENSG00000204525.10	106.57610	62.66480	0.76610	2.19930	1.55410	K562	UPF1
HLA-C	ENSG00000204525.10	227.58660	78.72050	1.53150	8.21300	5.69540	K562	UTP18
HLA-C	ENSG00000204525.10	114.25030	59.94740	0.93030	3.12070	1.83830	K562	UTP3
HLA-C	ENSG00000204525.10	114.72090	55.30910	1.05240	4.20320	3.10160	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for HLA-C is not available on ENCORE database.

3 RBPs can affect the splicing of HLA-C :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	HLA-C	ENSG00000204525.10	chr6	-	31237269	31237862	31237269	31237302	31237742	31237862	-0.21000	0.00009	0.00961	excluded	HepG2	DDX6
RI	HLA-C	ENSG00000204525.10	chr6	-	31237269	31237862	31237269	31237302	31237742	31237862	0.15500	0.00865	0.08380	included	HepG2	PCBP1
RI	HLA-C	ENSG00000204525.10	chr6	-	31237269	31237862	31237269	31237302	31237742	31237862	-0.16500	0.00618	0.05917	excluded	HepG2	NCBP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HLA-C

General Information

Functions

Localization

Domains (AlphaFold: HLA-C)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HLA-C is not avaliable on ENCORE database.

12 proteins are bound to HLA-C RNA:

eCLIP assay for HLA-C is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HLA-C is not available on ENCORE database.

122 RBPs can affect the gene expression of HLA-C :

The Knockdown/knockout RNA-Seq assay for HLA-C is not available on ENCORE database.

3 RBPs can affect the splicing of HLA-C :

The Knockdown/knockout RNA-Seq assay for HLA-C is not avaliable on ENCORE database.