HECTD3

General Information

Gene Name : HECTD3
Gene ID : ENSG00000126107.14
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: HECTD3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HECTD3	ENSG00000126107.14	13.06	14.97	14.02	ENCSR000AEF
HepG2	HECTD3	ENSG00000126107.14	20.23	14.11	17.17	ENCSR985KAT
K562	HECTD3	ENSG00000126107.14	30.46	29.51	29.98	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HECTD3 is not avaliable on ENCORE database.

Proteins bound to RNA

HECTD3 RNA is bound by 16 proteins.

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eCLIP assay for HECTD3 is not avaliable on ENCORE database.

16 proteins are bound to HECTD3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	45468679	45468811	-	3'-UTR,intron-Distal	3.86707	18.54601	K562	UPF1
chr1	45468334	45468427	-	3'-UTR,intron-Distal	3.93167	10.92054	K562	UPF1
chr1	45468415	45468493	-	3'-UTR,intron-Distal	4.07781	10.01488	HepG2	PCBP2
chr1	45468666	45468804	-	3'-UTR,intron-Distal	4.99724	7.98718	HepG2	UPF1
chr1	45468681	45468816	-	3'-UTR,intron-Distal	3.16142	6.98442	K562	IGF2BP1
chr1	45468265	45468312	-	3'-UTR,intron-Distal	3.53890	6.37005	K562	UPF1
chr1	45468276	45468384	-	3'-UTR,intron-Distal	3.82129	5.89669	K562	HNRNPK
chr1	45468766	45468804	-	3'-UTR,intron-Distal	5.05405	5.39854	K562	PTBP1
chr1	45470271	45470354	-	CDS,intron-Distal,intron-Proximal	4.58726	5.29868	K562	UCHL5
chr1	45468756	45468797	-	3'-UTR,intron-Distal	3.69586	5.21358	K562	TIA1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 23 entries

eCLIP assay for HECTD3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for HECTD3 is not available on ENCORE database.
93 RBPs can affect the levels of HECTD3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for HECTD3 is not available on ENCORE database.

93 RBPs can affect the gene expression of HECTD3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HECTD3	ENSG00000126107.10	2267.41910	910.11860	1.31680	74.48900	72.66680	HepG2	ZNF622
HECTD3	ENSG00000126107.10	1389.22560	700.39800	0.98790	29.42460	27.80310	HepG2	PUS1
HECTD3	ENSG00000126107.10	2284.67660	1126.82680	1.01960	25.36860	23.44000	K562	PTBP1
HECTD3	ENSG00000126107.10	1678.07670	681.89480	1.29910	24.44240	22.68610	HepG2	IGF2BP2
HECTD3	ENSG00000126107.10	1321.74040	644.53570	1.03600	15.38340	13.73200	HepG2	CIRBP
HECTD3	ENSG00000126107.10	1592.42390	785.39640	1.01960	14.85330	13.51820	HepG2	DDX3X
HECTD3	ENSG00000126107.10	1522.68300	744.65000	1.03190	14.48780	13.11240	HepG2	NCBP2
HECTD3	ENSG00000126107.10	1089.05310	543.44980	1.00280	13.33090	12.37290	HepG2	TIAL1
HECTD3	ENSG00000126107.10	1842.40540	978.76400	0.91250	12.49090	11.27940	HepG2	HNRNPLL
HECTD3	ENSG00000126107.10	1052.50210	657.86030	0.67790	11.36080	10.18260	HepG2	DKC1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 112 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for HECTD3 is not available on ENCORE database.

25 RBPs can affect the splicing of HECTD3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	HECTD3	ENSG00000126107.10	chr1	-	45475657	45475793	45475239	45475355	45475872	45475965	-0.16100	0.00009	excluded	K562	PRPF8
SE	HECTD3	ENSG00000126107.10	chr1	-	45475657	45475793	45475239	45475355	45475872	45475965	-0.12900	0.00001	excluded	K562	AQR
A3SS	HECTD3	ENSG00000126107.10	chr1	-	45469919	45470118	45469919	45470049	45470271	45470515	0.10100	0.00000	longer	K562	AQR
A3SS	HECTD3	ENSG00000126107.10	chr1	-	45474815	45474956	45474815	45474898	45475040	45475154	0.10900	0.00000	longer	K562	AQR
A3SS	HECTD3	ENSG00000126107.10	chr1	-	45470271	45470508	45470271	45470478	45471465	45471525	0.15900	0.00000	longer	K562	AQR
A3SS	HECTD3	ENSG00000126107.10	chr1	-	45473911	45474011	45473911	45473993	45474207	45474373	0.17300	0.00004	longer	K562	AQR
RI	HECTD3	ENSG00000126107.10	chr1	-	45471465	45471788	45471465	45471555	45471668	45471788	0.49500	0.00000	included	HepG2	PRPF8
RI	HECTD3	ENSG00000126107.10	chr1	-	45471465	45471788	45471465	45471555	45471668	45471788	0.35000	0.00000	included	K562	PRPF8
RI	HECTD3	ENSG00000126107.10	chr1	-	45471465	45471788	45471465	45471555	45471668	45471788	0.36300	0.00007	included	HepG2	TIAL1
RI	HECTD3	ENSG00000126107.10	chr1	-	45471465	45471788	45471465	45471555	45471668	45471788	0.34700	0.00000	included	K562	EFTUD2

Showing 1 to 10 of 38 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HECTD3

General Information

Functions

Localization

Domains (AlphaFold: HECTD3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HECTD3 is not avaliable on ENCORE database.

16 proteins are bound to HECTD3 RNA:

eCLIP assay for HECTD3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HECTD3 is not available on ENCORE database.

93 RBPs can affect the gene expression of HECTD3 :

The Knockdown/knockout RNA-Seq assay for HECTD3 is not available on ENCORE database.

25 RBPs can affect the splicing of HECTD3 :

The Knockdown/knockout RNA-Seq assay for HECTD3 is not avaliable on ENCORE database.