GDF7

General Information

Gene Name       : GDF7
Gene ID             : ENSG00000143869.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GDF7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GDF7ENSG00000143869.60.030.030.03ENCSR000AEF
HepG2GDF7ENSG00000143869.66.686.246.46ENCSR985KAT
K562GDF7ENSG00000143869.60.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GDF7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GDF7 RNA is bound by 4 proteins.  







eCLIP assay for GDF7 is not avaliable on ENCORE database.





4 proteins are bound to GDF7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr22087207820872155+3'-UTR3.780545.09002HepG2FAM120A
chr22087240420872453+3'-UTR4.039693.35877HepG2UPF1
chr22087195420872098+3'-UTR3.548379.71285HepG2UPF1
chr22087209820872263+3'-UTR4.7913612.47468HepG2UPF1
chr22086666920866792+5'-UTR3.582987.41671HepG2FAM120A
chr22086699820867051+5'-UTR,CDS4.531497.51958HepG2DDX3X
chr22086657320866632+5'-UTR4.499604.83789HepG2FAM120A
chr22086714820867236+CDS4.3014310.34792HepG2DDX3X
chr22086799520868059+intron-Distal3.619283.76399HepG2CDC40
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GDF7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GDF7 is not available on ENCORE database.

  • 92 RBPs can affect the levels of GDF7.  








The Knockdown/knockout RNA-Seq assay for GDF7 is not available on ENCORE database.





92 RBPs can affect the gene expression of GDF7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GDF7ENSG00000143869.5136.44050220.12320-0.690003.251602.09660HepG2AATF
GDF7ENSG00000143869.5126.44240302.12760-1.2567013.7887012.65020HepG2ACO1
GDF7ENSG00000143869.5311.45150165.824600.909206.431004.98640HepG2ADAR
GDF7ENSG00000143869.5332.53870676.40700-1.024406.944006.14350HepG2AKAP1
GDF7ENSG00000143869.5401.18480559.70010-0.480402.352801.62520HepG2ASCC1
GDF7ENSG00000143869.5156.49830307.88310-0.976206.725604.64570HepG2ATP5C1
GDF7ENSG00000143869.5254.72780408.66530-0.682005.855504.91910HepG2AUH
GDF7ENSG00000143869.595.08860166.12630-0.804903.303102.65590HepG2BOP1
GDF7ENSG00000143869.5123.17790228.64810-0.892405.016604.01440HepG2CALR
GDF7ENSG00000143869.578.72540215.30950-1.451504.917703.89310HepG2CNOT7
GDF7ENSG00000143869.5184.76290280.95930-0.604703.050801.89160HepG2CPSF7
GDF7ENSG00000143869.5202.26820126.789700.673702.755001.67910HepG2CSTF2
GDF7ENSG00000143869.5156.57990252.58000-0.689804.413803.63480HepG2CELF1
GDF7ENSG00000143869.5179.43910271.64270-0.598204.094203.22140HepG2DAZAP1
GDF7ENSG00000143869.5482.64400279.420400.7884010.377908.96640HepG2DDX19B
GDF7ENSG00000143869.5340.52070237.667900.518702.858001.92720HepG2DDX24
GDF7ENSG00000143869.5308.83700173.187800.834403.556402.45210HepG2DDX59
GDF7ENSG00000143869.5533.48360289.051800.8840010.988809.82350HepG2DKC1
GDF7ENSG00000143869.5233.64490535.13090-1.195605.935705.08370HepG2EIF2S1
GDF7ENSG00000143869.558.48520196.84990-1.751006.204504.89050HepG2EIF3D
GDF7ENSG00000143869.5372.24870575.72550-0.629103.244302.50240HepG2EIF4B
GDF7ENSG00000143869.5449.06790256.681000.806906.250905.04980HepG2EIF4G2
GDF7ENSG00000143869.5401.68790295.522900.442702.304201.30190HepG2ESF1
GDF7ENSG00000143869.597.58490231.46750-1.246109.036307.19090HepG2FASTKD2
GDF7ENSG00000143869.5104.55730344.46100-1.7200014.6202013.08150HepG2FIP1L1
GDF7ENSG00000143869.5264.24560353.62430-0.420302.019001.33890HepG2FUBP3
GDF7ENSG00000143869.5389.49800596.53270-0.615003.487102.71610HepG2FXR1
GDF7ENSG00000143869.5270.70060553.48790-1.031907.154406.10870HepG2G3BP1
GDF7ENSG00000143869.5774.82070587.446300.399302.516101.66870HepG2G3BP2
GDF7ENSG00000143869.5664.40450172.876501.9422029.2341027.41710HepG2GPKOW
GDF7ENSG00000143869.5102.51000249.51300-1.283407.517105.12800HepG2GTF2F1
GDF7ENSG00000143869.5297.14740114.493801.3758015.1400013.63580HepG2HNRNPF
GDF7ENSG00000143869.5360.80850560.18500-0.634704.112603.27540HepG2HNRNPK
GDF7ENSG00000143869.5157.05550237.68350-0.597802.851901.88630HepG2HNRNPM
GDF7ENSG00000143869.5286.61200112.744101.3459013.0684011.61580HepG2IGF2BP1
GDF7ENSG00000143869.5254.35450527.85580-1.053304.067802.87830HepG2IGF2BP3
GDF7ENSG00000143869.5116.11750190.27440-0.712503.899203.04430HepG2ILF2
GDF7ENSG00000143869.5348.27040205.411000.761604.488102.91780HepG2KHDRBS1
GDF7ENSG00000143869.5778.12520565.852100.459502.464901.52890HepG2KHSRP
GDF7ENSG00000143869.5201.15080276.17670-0.457302.615201.62220HepG2KIF1C
GDF7ENSG00000143869.5102.60100205.98980-1.005503.114801.99650HepG2METAP2
GDF7ENSG00000143869.5176.07810278.81630-0.663103.513602.60310HepG2MSI2
GDF7ENSG00000143869.5260.57010168.271600.630802.254801.38470HepG2MTPAP
GDF7ENSG00000143869.5393.39750614.28120-0.642903.766903.03200HepG2NCBP2
GDF7ENSG00000143869.5348.90840242.600600.524203.369601.80970HepG2NIP7
GDF7ENSG00000143869.5153.99340244.72850-0.668302.819501.37340HepG2NKRF
GDF7ENSG00000143869.5154.28780269.35730-0.803905.750704.65740HepG2NOL12
GDF7ENSG00000143869.5320.68850185.438900.790102.781701.68470HepG2NONO
GDF7ENSG00000143869.5432.36060146.290701.5633017.2103015.53460HepG2NSUN2
GDF7ENSG00000143869.5167.34260274.42520-0.713604.386502.37170HepG2NUP35
GDF7ENSG00000143869.5274.25040547.19190-0.996606.535005.43640HepG2PABPC4
GDF7ENSG00000143869.592.76900184.38840-0.991005.879704.71480HepG2PARN
GDF7ENSG00000143869.5348.51260598.72820-0.7807010.207109.15790HepG2PCBP1
GDF7ENSG00000143869.5332.69410166.143201.001709.746708.40760HepG2PPIL4
GDF7ENSG00000143869.5307.96590218.839200.492802.980002.18130HepG2PRPF4
GDF7ENSG00000143869.5391.13080609.23420-0.639307.768006.94450HepG2PTBP1
GDF7ENSG00000143869.5522.18150257.109201.0221010.982609.90140HepG2PUF60
GDF7ENSG00000143869.5428.56770307.735200.477703.724903.03280HepG2PUS1
GDF7ENSG00000143869.5371.88330659.80320-0.8272010.102209.01320HepG2QKI
GDF7ENSG00000143869.562.36170241.64810-1.9542011.6351010.26520HepG2RAVER1
GDF7ENSG00000143869.5176.39850392.14980-1.1526012.5881011.64490HepG2RBM22
GDF7ENSG00000143869.5373.88160598.81860-0.679506.379005.39380HepG2RBM25
GDF7ENSG00000143869.5190.16380323.47770-0.766402.313701.41500HepG2RBM27
GDF7ENSG00000143869.593.54800262.67630-1.489506.467004.84400HepG2RCC2
GDF7ENSG00000143869.5394.95180678.01430-0.7796010.166109.25030HepG2NELFE
GDF7ENSG00000143869.5762.38060631.487000.271702.012001.47520HepG2RECQL
GDF7ENSG00000143869.5238.89080123.331300.953705.864404.92300HepG2RPLP0
GDF7ENSG00000143869.5364.35570216.444700.751204.144503.16560HepG2RPS3A
GDF7ENSG00000143869.5144.70960304.53050-1.073404.134302.80760HepG2RPS5
GDF7ENSG00000143869.566.70470153.98410-1.206905.325004.26730HepG2RRP9
GDF7ENSG00000143869.5288.04310163.293800.818704.815703.90670HepG2SF3B1
GDF7ENSG00000143869.5380.94260634.28100-0.735509.091008.11340HepG2SF3B4
GDF7ENSG00000143869.5518.96320246.489501.0740016.1034014.66770HepG2SLBP
GDF7ENSG00000143869.582.22300246.79150-1.5857011.782209.73500HepG2SMNDC1
GDF7ENSG00000143869.5175.08830442.92850-1.3390019.5906018.57420HepG2SRFBP1
GDF7ENSG00000143869.5378.96930662.05630-0.8049011.0255010.21820HepG2SRSF1
GDF7ENSG00000143869.5230.72860112.484901.036407.819106.74680HepG2SRSF7
GDF7ENSG00000143869.5933.49580384.583901.2792033.9090032.57330HepG2SSB
GDF7ENSG00000143869.599.17650230.10650-1.214206.393904.61330HepG2STAU1
GDF7ENSG00000143869.5126.01260232.62410-0.884405.432604.13900HepG2SUPT6H
GDF7ENSG00000143869.5311.90510200.950400.634202.501301.85410HepG2SUPV3L1
GDF7ENSG00000143869.5439.67520595.09390-0.436703.496802.87970HepG2TAF15
GDF7ENSG00000143869.5338.64690546.79760-0.691206.742905.44100HepG2TIA1
GDF7ENSG00000143869.5325.77940181.026000.847606.591305.88010HepG2TIAL1
GDF7ENSG00000143869.5390.37970251.154400.636204.139203.04620HepG2TUFM
GDF7ENSG00000143869.547.58250118.69490-1.318805.913604.79310HepG2UCHL5
GDF7ENSG00000143869.5235.96760390.70390-0.727506.115105.28280HepG2UTP3
GDF7ENSG00000143869.5125.12360237.75520-0.926103.920702.41060HepG2XRCC5
GDF7ENSG00000143869.5116.31080265.82190-1.192507.454105.78670HepG2XRCC6
GDF7ENSG00000143869.5353.12800197.814200.835904.538103.61680HepG2XRN2
GDF7ENSG00000143869.5320.38350215.952300.569004.051903.26320HepG2ZC3H8
GDF7ENSG00000143869.5266.19550445.07260-0.741607.743706.94880HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GDF7 is not available on ENCORE database.






No RBPs affect the alternative splcing events of GDF7 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for GDF7 is not avaliable on ENCORE database.