ETFDH

General Information

Gene Name       : ETFDH
Gene ID             : ENSG00000171503.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ETFDH)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ETFDHENSG00000171503.1117.5915.2916.44ENCSR000AEF
HepG2ETFDHENSG00000171503.116.059.607.82ENCSR985KAT
K562ETFDHENSG00000171503.1118.9522.6320.79ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ETFDH is not avaliable on ENCORE database.



Proteins bound to RNA
  • ETFDH RNA is bound by 1 proteins.  







eCLIP assay for ETFDH is not avaliable on ENCORE database.





1 proteins are bound to ETFDH RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4159603351159603538+CDS,intron-Distal3.257168.43208HepG2BCLAF1
chr4159627350159627401+CDS4.026883.02457HepG2BCLAF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ETFDH is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ETFDH is not available on ENCORE database.

  • 104 RBPs can affect the levels of ETFDH.  








The Knockdown/knockout RNA-Seq assay for ETFDH is not available on ENCORE database.





104 RBPs can affect the gene expression of ETFDH :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ETFDHENSG00000171503.7192.34050273.77780-0.509302.996402.36780HepG2ACO1
ETFDHENSG00000171503.7461.62990267.358400.787906.522005.64900HepG2BOP1
ETFDHENSG00000171503.7709.38060488.809800.537203.922103.01040HepG2CIRBP
ETFDHENSG00000171503.7404.20600245.454500.719504.815003.92920HepG2CPSF6
ETFDHENSG00000171503.7252.01440166.968600.593803.244302.14030HepG2YBX3
ETFDHENSG00000171503.7198.00090292.24420-0.561703.365502.67070HepG2CELF1
ETFDHENSG00000171503.7336.42730232.373300.533802.932901.98890HepG2DDX24
ETFDHENSG00000171503.7298.22500185.528700.684703.339101.93440HepG2DDX27
ETFDHENSG00000171503.7456.78090595.65970-0.383001.972701.43610HepG2DDX3X
ETFDHENSG00000171503.7606.80600457.181800.408402.597101.33940HepG2DDX47
ETFDHENSG00000171503.7523.01740324.453500.688705.466604.09330HepG2DDX5
ETFDHENSG00000171503.7260.05630511.65320-0.976307.850006.86110HepG2DDX6
ETFDHENSG00000171503.7388.97450158.125801.2985014.2091012.24380HepG2DHX30
ETFDHENSG00000171503.7418.46170261.941300.675805.878704.95840HepG2DKC1
ETFDHENSG00000171503.7244.56900163.943400.576903.119502.37730HepG2DNAJC21
ETFDHENSG00000171503.7318.66620224.401500.505902.218201.39080HepG2EEF2
ETFDHENSG00000171503.7366.50600491.89520-0.424502.224201.68640HepG2EIF2S1
ETFDHENSG00000171503.7249.46550529.25900-1.085108.143606.99410HepG2EIF4B
ETFDHENSG00000171503.7585.95340310.012100.9184012.6457011.11370HepG2EIF4G1
ETFDHENSG00000171503.7492.58760296.972700.730005.822604.66000HepG2EIF4G2
ETFDHENSG00000171503.7403.24360297.320200.439502.366001.35480HepG2ESF1
ETFDHENSG00000171503.7596.31210380.080100.649707.134406.24350HepG2ETF1
ETFDHENSG00000171503.7228.35240346.54140-0.601802.836002.05610HepG2FIP1L1
ETFDHENSG00000171503.7257.91720165.026500.644103.171501.81430HepG2FKBP4
ETFDHENSG00000171503.7226.32960328.57230-0.537802.969302.15700HepG2FUBP3
ETFDHENSG00000171503.7240.45760548.44180-1.1896012.5811011.21200HepG2FXR1
ETFDHENSG00000171503.7410.54010278.255100.561002.971702.31090HepG2GPKOW
ETFDHENSG00000171503.7300.53280184.107400.706903.876803.06660HepG2HNRNPC
ETFDHENSG00000171503.7384.24440217.163200.823108.465007.29960HepG2HNRNPF
ETFDHENSG00000171503.7239.37700515.13470-1.1057011.178709.85970HepG2HNRNPK
ETFDHENSG00000171503.7586.10300265.542801.1421012.5819011.36770HepG2HNRNPLL
ETFDHENSG00000171503.7137.45810239.13460-0.798804.337503.17200HepG2HNRNPM
ETFDHENSG00000171503.7273.80340182.889900.582103.678402.98930HepG2HNRNPU
ETFDHENSG00000171503.7506.66630213.845801.2444017.5753015.92690HepG2IGF2BP1
ETFDHENSG00000171503.7257.98310485.31360-0.911603.395002.30520HepG2IGF2BP3
ETFDHENSG00000171503.7329.18550520.17500-0.660103.807302.61230HepG2KHSRP
ETFDHENSG00000171503.7240.81200551.71100-1.1960011.4881010.26640HepG2MATR3
ETFDHENSG00000171503.7456.67600270.789900.753903.784002.63910HepG2MTPAP
ETFDHENSG00000171503.7344.01920564.71280-0.715005.226304.36810HepG2NCBP2
ETFDHENSG00000171503.7365.62820235.444800.634903.720702.85530HepG2NSUN2
ETFDHENSG00000171503.7324.90210471.04410-0.535904.533503.78880HepG2PCBP1
ETFDHENSG00000171503.7271.26280479.31940-0.821309.334908.44730HepG2PTBP1
ETFDHENSG00000171503.7486.93790297.447400.711005.939805.11110HepG2PUF60
ETFDHENSG00000171503.7234.60050315.75160-0.428602.628802.04740HepG2PUM1
ETFDHENSG00000171503.7225.85510315.52220-0.482302.546901.90280HepG2PUM2
ETFDHENSG00000171503.7389.35650519.08400-0.414902.716502.09760HepG2QKI
ETFDHENSG00000171503.7137.76340290.76340-1.077704.963404.03390HepG2RAVER1
ETFDHENSG00000171503.7163.72400317.67310-0.956308.040407.26490HepG2RBM22
ETFDHENSG00000171503.7288.13490471.11370-0.709305.870304.92070HepG2RBM25
ETFDHENSG00000171503.7246.05270533.42450-1.1163015.1362014.06160HepG2NELFE
ETFDHENSG00000171503.7311.70820496.83420-0.672606.430105.54530HepG2RECQL
ETFDHENSG00000171503.7534.25210233.907001.1915014.2951012.97000HepG2RPLP0
ETFDHENSG00000171503.7655.37730285.703201.1977010.609108.89300HepG2RPS10
ETFDHENSG00000171503.7549.09070382.530300.521402.692401.90360HepG2RPS3A
ETFDHENSG00000171503.7344.93210177.909400.955106.937105.46500HepG2SERBP1
ETFDHENSG00000171503.7276.42010576.19720-1.059702.761201.41150HepG2SF1
ETFDHENSG00000171503.7333.89650461.53650-0.467002.005801.42960HepG2SF3A3
ETFDHENSG00000171503.7483.85620262.842600.880307.856306.72270HepG2SF3B1
ETFDHENSG00000171503.7290.59150499.00750-0.780108.215907.28070HepG2SF3B4
ETFDHENSG00000171503.7270.28400558.32050-1.046602.778601.33010HepG2SFPQ
ETFDHENSG00000171503.7404.27570285.201700.503303.914403.10240HepG2SLBP
ETFDHENSG00000171503.7225.32640293.68370-0.382201.865001.33720HepG2SRSF5
ETFDHENSG00000171503.7463.43400213.348501.1191015.9623014.52950HepG2SRSF7
ETFDHENSG00000171503.7315.44450423.76170-0.425903.056202.48170HepG2SRSF9
ETFDHENSG00000171503.7770.13440311.507401.3057029.8392028.56370HepG2SSB
ETFDHENSG00000171503.7367.51690234.050300.650904.522503.33490HepG2SUPT6H
ETFDHENSG00000171503.7291.27460197.372000.561402.710402.03960HepG2SUPV3L1
ETFDHENSG00000171503.7427.81480258.786600.725105.289504.33300HepG2TARDBP
ETFDHENSG00000171503.7236.87430177.698600.414601.716701.30280HepG2TIAL1
ETFDHENSG00000171503.7183.45450292.03130-0.670702.802601.32450HepG2TRA2A
ETFDHENSG00000171503.7288.88450599.15790-1.052402.635701.67230HepG2U2AF2
ETFDHENSG00000171503.7430.56380307.583300.485202.108401.38370HepG2UBE2L3
ETFDHENSG00000171503.791.97070180.79500-0.975103.195902.11570HepG2UPF2
ETFDHENSG00000171503.7239.96320395.17410-0.719706.284005.44120HepG2UTP3
ETFDHENSG00000171503.7453.21190196.350101.2067017.8146016.37050HepG2ZC3H8
ETFDHENSG00000171503.7813.574501001.79320-0.300202.747602.18110K562AGGF1
ETFDHENSG00000171503.7717.880301042.40510-0.538105.266904.35230K562AKAP8L
ETFDHENSG00000171503.71045.67260775.810900.430603.880802.37710K562APOBEC3C
ETFDHENSG00000171503.7379.53060760.48570-1.0027011.5130010.43600K562AQR
ETFDHENSG00000171503.7812.359301093.72230-0.429104.815203.57540K562ATP5C1
ETFDHENSG00000171503.7511.55880874.29280-0.773203.194202.04080K562CNOT7
ETFDHENSG00000171503.7555.46580709.71700-0.353502.706501.61180K562CPEB4
ETFDHENSG00000171503.7170.50610252.96780-0.569102.694801.65010K562CSTF2
ETFDHENSG00000171503.7938.923901121.74090-0.256702.139101.38030K562DKC1
ETFDHENSG00000171503.7328.62640466.31340-0.504903.283402.41970K562EIF3G
ETFDHENSG00000171503.7332.55690481.42280-0.533703.402302.45090K562FMR1
ETFDHENSG00000171503.7270.05040408.03940-0.595503.537302.49470K562FTO
ETFDHENSG00000171503.7502.49940363.916700.465403.449402.78480K562FXR1
ETFDHENSG00000171503.7360.16110482.97960-0.423302.957901.77810K562GLRX3
ETFDHENSG00000171503.7268.31060451.77620-0.751706.054704.88020K562GPKOW
ETFDHENSG00000171503.7484.77970703.68120-0.537604.354903.41080K562GRSF1
ETFDHENSG00000171503.7514.93500663.65650-0.366002.473801.48000K562HNRNPL
ETFDHENSG00000171503.7327.67270428.13440-0.385802.470401.62630K562HNRNPU
ETFDHENSG00000171503.7391.25110543.42830-0.474002.474601.52210K562IGF2BP2
ETFDHENSG00000171503.7136.65310224.08310-0.713503.592201.90290K562KHDRBS1
ETFDHENSG00000171503.7903.687101106.27380-0.291802.012701.31760K562KIF1C
ETFDHENSG00000171503.7423.21900571.39360-0.433103.054402.17050K562MAGOH
ETFDHENSG00000171503.7426.28510570.27580-0.419802.990802.02740K562MATR3
ETFDHENSG00000171503.7264.91560440.98000-0.735205.810304.51250K562METAP2
ETFDHENSG00000171503.7710.60970937.16060-0.399202.503201.43090K562MSI2
ETFDHENSG00000171503.7362.90250564.19040-0.636607.517406.37160K562NSUN2
ETFDHENSG00000171503.7524.191001039.53910-0.987803.661802.47840K562PABPN1
ETFDHENSG00000171503.7382.70120508.44850-0.409902.412101.50110K562PCBP2
ETFDHENSG00000171503.7680.744301007.26910-0.565307.004806.09010K562RBM15
ETFDHENSG00000171503.7313.75870532.44650-0.763004.170403.11420K562RBM22
ETFDHENSG00000171503.7472.13680796.28420-0.754103.061801.45290K562SBDS
ETFDHENSG00000171503.7487.23700951.04290-0.964903.300001.95370K562SF1
ETFDHENSG00000171503.7414.23960556.73030-0.426503.241902.36220K562SF3A3
ETFDHENSG00000171503.7245.40230396.75220-0.693104.470803.37430K562SF3B4
ETFDHENSG00000171503.7517.425301159.94940-1.164604.042702.34780K562SFPQ
ETFDHENSG00000171503.7565.49320837.00320-0.565704.741702.82590K562SUCLG1
ETFDHENSG00000171503.7388.67010293.777800.403702.214001.47850K562SYNCRIP
ETFDHENSG00000171503.7289.29600550.80780-0.929007.793806.53130K562TARDBP
ETFDHENSG00000171503.7409.20310531.29910-0.376702.092401.38790K562TIA1
ETFDHENSG00000171503.7163.61400318.71290-0.962003.886002.76550K562TIAL1
ETFDHENSG00000171503.7215.46870338.40500-0.651302.180501.35600K562TRIM56
ETFDHENSG00000171503.7495.01740598.22400-0.273201.923801.31670K562UPF1
ETFDHENSG00000171503.7539.66860856.81510-0.666905.648404.34270K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ETFDH is not available on ENCORE database.





7 RBPs can affect the splicing of ETFDH :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEETFDHENSG00000171503.7chr4+1596004411596006711595934671595936421596016181596017590.613000.002420.02569includedK562AQR
SEETFDHENSG00000171503.7chr4+159606252159606371159605743159605825159611499159611577-0.126000.001590.01803excludedK562AQR
SEETFDHENSG00000171503.7chr4+159606252159606371159605743159605825159611499159611577-0.219000.002740.05137excludedK562U2AF1
SEETFDHENSG00000171503.7chr4+1596004411596006711595934671595936421596016181596017590.347000.000210.02262includedK562HNRNPUL1
SEETFDHENSG00000171503.7chr4+1596220261596220711596201381596202821596245741596247430.401000.000090.00257includedK562U2AF2
SEETFDHENSG00000171503.7chr4+1596220261596220711596201381596202821596245741596247430.089000.000690.08836includedK562ZC3H8
SEETFDHENSG00000171503.7chr4+159600441159600671159593467159593642159601618159601759-0.236000.001680.05962excludedK562PTBP1
SEETFDHENSG00000171503.7chr4+1596220261596220711596201381596202821596245741596247430.082000.000690.09358includedK562NPM1
MXEETFDHENSG00000171503.7chr4+159620138159620282159622026159622071159618710159618851159624574159624743-0.380000.000060.002062includedK562U2AF1
MXEETFDHENSG00000171503.7chr4+159620138159620282159622026159622071159618710159618851159624574159624743-0.459000.000020.000562includedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ETFDH is not avaliable on ENCORE database.