COA4

General Information

Gene Name : COA4
Gene ID : ENSG00000181924.6
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: COA4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	COA4	ENSG00000181924.6	37.95	65.62	51.79	ENCSR000AEF
HepG2	COA4	ENSG00000181924.6	101.27	64.64	82.95	ENCSR985KAT
K562	COA4	ENSG00000181924.6	150.48	108.00	129.24	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for COA4 is not avaliable on ENCORE database.

Proteins bound to RNA

COA4 RNA is bound by 11 proteins.

CanvasJS.com

eCLIP assay for COA4 is not avaliable on ENCORE database.

11 proteins are bound to COA4 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	73583756	73583827	-	3'-UTR,intron-Distal,intron-Proximal	5.20361	27.15095	K562	ZC3H11A
chr11	73583735	73583835	-	3'-UTR,intron-Distal,intron-Proximal	4.59100	19.53911	HepG2	ZC3H11A
chr11	73584262	73584360	-	CDS,intron-Distal	4.88911	15.54543	HepG2	GRWD1
chr11	73587801	73587919	-	5'-UTR,intron-Distal,intron-Proximal	3.77765	8.98176	K562	DDX3X
chr11	73584289	73584405	-	CDS,intron-Distal	4.81295	7.65454	HepG2	SRSF1
chr11	73587686	73587753	-	5'-UTR,intron-Distal,intron-Proximal	3.48783	6.81166	HepG2	XPO5
chr11	73587572	73587650	-	5'-UTR,intron-Distal,intron-Proximal	4.48935	6.32636	HepG2	U2AF2
chr11	73587735	73587833	-	5'-UTR,intron-Distal,intron-Proximal	3.53410	5.73990	HepG2	PRPF8
chr11	73584112	73584178	-	3'-UTR,CDS,intron-Distal	4.36602	5.60746	K562	YBX3
chr11	73584284	73584429	-	3'-UTR,CDS,intron-Distal	3.75635	5.11568	K562	PUM1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 12 entries

eCLIP assay for COA4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for COA4 is not available on ENCORE database.
79 RBPs can affect the levels of COA4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for COA4 is not available on ENCORE database.

79 RBPs can affect the gene expression of COA4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
COA4	ENSG00000181924.6	1291.77040	663.63730	0.96080	21.89320	20.30650	K562	FXR1
COA4	ENSG00000181924.6	805.15340	481.40920	0.74190	12.62020	11.39430	HepG2	SAFB2
COA4	ENSG00000181924.6	780.15700	1217.17860	-0.64170	11.64920	10.40710	HepG2	AUH
COA4	ENSG00000181924.6	488.35910	838.39410	-0.77970	9.98490	8.48370	K562	CPSF6
COA4	ENSG00000181924.6	1791.84970	1269.60250	0.49700	9.16040	8.05880	K562	DDX47
COA4	ENSG00000181924.6	988.21090	656.26820	0.59040	8.95030	7.97310	HepG2	UTP3
COA4	ENSG00000181924.6	731.73490	1102.32200	-0.59120	8.77490	7.91180	HepG2	PTBP1
COA4	ENSG00000181924.6	1067.68740	677.06780	0.65700	8.83090	7.68590	K562	PTBP1
COA4	ENSG00000181924.6	680.75590	1076.74170	-0.66150	8.14900	7.26890	HepG2	TAF15
COA4	ENSG00000181924.6	848.74650	539.99440	0.65230	8.20320	6.83880	K562	EIF3G
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 86 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for COA4 is not available on ENCORE database.

12 RBPs can affect the splicing of COA4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	COA4	ENSG00000181924.6	chr11	-	73587523	73587620	73584041	73584439	73587801	73587888	0.09500	0.00000	0.00001	included	K562	XRCC6
SE	COA4	ENSG00000181924.6	chr11	-	73587523	73587620	73584041	73584439	73587801	73587888	0.07000	0.00000	0.00008	included	K562	SUPV3L1
SE	COA4	ENSG00000181924.6	chr11	-	73587523	73587620	73584041	73584439	73587801	73587888	0.14700	0.00000	0.00000	included	K562	HNRNPC
SE	COA4	ENSG00000181924.6	chr11	-	73587523	73587620	73584041	73584439	73587801	73587888	0.06500	0.00001	0.00092	included	HepG2	SRSF9
SE	COA4	ENSG00000181924.6	chr11	-	73587523	73587620	73584041	73584439	73587801	73587888	0.12600	0.00004	0.01472	included	K562	GPKOW
SE	COA4	ENSG00000181924.6	chr11	-	73587523	73587620	73584041	73584439	73587801	73587888	0.12700	0.00008	0.01472	included	K562	CPSF6
SE	COA4	ENSG00000181924.6	chr11	-	73587523	73587620	73584041	73584439	73587801	73587888	-0.07900	0.00012	0.01738	excluded	HepG2	SRSF7
SE	COA4	ENSG00000181924.6	chr11	-	73587523	73587620	73584041	73584439	73587801	73587888	0.09500	0.00024	0.02258	included	HepG2	TIAL1
SE	COA4	ENSG00000181924.6	chr11	-	73587523	73587620	73584041	73584439	73587801	73587888	0.13300	0.00027	0.05930	included	K562	FTO
SE	COA4	ENSG00000181924.6	chr11	-	73587523	73587620	73584041	73584439	73587801	73587888	-0.09100	0.00040	0.07715	excluded	HepG2	PRPF4

Showing 1 to 10 of 12 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

COA4

General Information

Functions

Localization

Domains (AlphaFold: COA4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for COA4 is not avaliable on ENCORE database.

11 proteins are bound to COA4 RNA:

eCLIP assay for COA4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for COA4 is not available on ENCORE database.

79 RBPs can affect the gene expression of COA4 :

The Knockdown/knockout RNA-Seq assay for COA4 is not available on ENCORE database.

12 RBPs can affect the splicing of COA4 :

The Knockdown/knockout RNA-Seq assay for COA4 is not avaliable on ENCORE database.