CLEC2D

General Information

Gene Name       : CLEC2D
Gene ID             : ENSG00000069493.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CLEC2D)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CLEC2DENSG00000069493.1418.3711.2614.82ENCSR000AEF
HepG2CLEC2DENSG00000069493.141.261.461.36ENCSR985KAT
K562CLEC2DENSG00000069493.141.501.471.48ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CLEC2D is not avaliable on ENCORE database.



Proteins bound to RNA
  • CLEC2D RNA is bound by 11 proteins.  







eCLIP assay for CLEC2D is not avaliable on ENCORE database.





11 proteins are bound to CLEC2D RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1298477949847864+3'-UTR3.297023.08145HepG2HLTF
chr1298454569845513+3'-UTR,CDS,intron-Distal5.067346.71715HepG2BCLAF1
chr1298473499847396+3'-UTR,CDS,intron-Proximal4.408863.45799HepG2U2AF2
chr1298335959833629+5'-UTR,CDS,intron-Distal3.317304.34695HepG2BCLAF1
chr1298269249826970+intron-Distal3.242216.84019HepG2SUGP2
chr1298301069830228+intron-Distal4.1436115.74403HepG2SUGP2
chr1298300449830077+intron-Distal4.145233.27829HepG2MATR3
chr1298301189830167+intron-Distal3.997944.02846K562HNRNPM
chr1298330379833110+intron-Distal3.692734.33990HepG2QKI
chr1298263439826393+intron-Distal4.7126912.11426HepG2SUGP2
chr1298285699828590+intron-Distal4.600805.04879HepG2SUGP2
chr1298286989828778+intron-Distal3.405235.37771HepG2PTBP1
chr1298258449825887+intron-Distal3.726957.27760HepG2SUGP2
chr1298249279825062+intron-Distal3.2706110.36913HepG2HNRNPL
chr1298258879825954+intron-Distal3.9247014.71600HepG2SUGP2
chr1298346979834754+intron-Distal4.408863.45799HepG2U2AF2
chr1298315659831654+intron-Distal4.426324.85866HepG2QKI
chr1298183119818359+intron-Distal3.890983.80060HepG2HNRNPC
chr1298320889832193+intron-Distal4.492835.19823K562KHSRP
chr1298307149830773+intron-Distal3.775937.51551HepG2SUGP2
chr1298275839827691+intron-Distal3.724583.45805K562KHSRP
chr1298270249827047+intron-Distal3.160604.87176HepG2SUGP2
chr1298415299841612+intron-Distal3.489964.35275HepG2HLTF
chr1298268339826878+intron-Distal,intron-Proximal3.600097.91745HepG2SUGP2
chr1298249409825064+intron-Distal3.029784.54306K562HNRNPL
chr1298260779826151+intron-Distal3.2244410.93678HepG2SUGP2
chr1298186059818701+intron-Distal3.223169.21771HepG2HNRNPL
chr1298253739825422+intron-Distal3.638508.04518HepG2SUGP2
chr1298300519830081+intron-Distal3.255025.59320HepG2SUGP2
chr1298301049830217+intron-Distal5.107699.61540K562KHSRP
chr1298301189830169+intron-Distal4.049347.24726HepG2HNRNPM
chr1298260999826125+intron-Distal4.039483.27829HepG2MATR3
chr1298257969825835+intron-Distal3.465186.79980HepG2SUGP2
chr1298301109830210+intron-Distal3.093493.31127HepG2MATR3
chr1298290829829104+intron-Distal3.086824.63410HepG2SUGP2
chr1298288029828816+intron-Distal3.651733.59523HepG2SUGP2
chr1298315569831648+intron-Distal4.712264.21977HepG2HNRNPL
chr1298289319828957+intron-Distal3.600804.33009HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CLEC2D is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CLEC2D is not available on ENCORE database.

  • 78 RBPs can affect the levels of CLEC2D.  








The Knockdown/knockout RNA-Seq assay for CLEC2D is not available on ENCORE database.





78 RBPs can affect the gene expression of CLEC2D :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CLEC2DENSG00000069493.1069.37790128.12210-0.885002.684101.75520HepG2ABCF1
CLEC2DENSG00000069493.1060.00290113.21400-0.915903.675502.99330HepG2ACO1
CLEC2DENSG00000069493.1042.55140162.48250-1.9330010.211409.25570HepG2AKAP1
CLEC2DENSG00000069493.1050.53840113.75770-1.170505.176404.15630HepG2AKAP8L
CLEC2DENSG00000069493.1061.64490127.72810-1.051003.902102.99320HepG2CIRBP
CLEC2DENSG00000069493.1051.75310113.20360-1.129204.995304.15030HepG2CKAP4
CLEC2DENSG00000069493.10104.5941045.074701.214302.087501.48040HepG2CPSF6
CLEC2DENSG00000069493.10284.85380187.459100.603503.225902.43630HepG2DAZAP1
CLEC2DENSG00000069493.1040.1166087.39320-1.123303.401102.65500HepG2DDX21
CLEC2DENSG00000069493.1079.32830155.64690-0.972404.000803.26020HepG2DDX3X
CLEC2DENSG00000069493.10264.43920172.669700.614803.154701.77920HepG2DDX47
CLEC2DENSG00000069493.10139.6941072.335900.949404.093602.91690HepG2DHX30
CLEC2DENSG00000069493.10121.9318074.995600.701102.473701.80460HepG2DNAJC21
CLEC2DENSG00000069493.1052.3269097.18940-0.893202.789401.61520HepG2EIF2S2
CLEC2DENSG00000069493.1033.7754072.82910-1.108502.689101.79760HepG2EIF3D
CLEC2DENSG00000069493.1064.02820110.64290-0.789102.597601.78910HepG2EWSR1
CLEC2DENSG00000069493.1065.57160129.37190-0.980402.906802.11790HepG2FIP1L1
CLEC2DENSG00000069493.10162.0173079.509201.026904.540603.54800HepG2FUBP3
CLEC2DENSG00000069493.1084.86480175.47120-1.048004.592503.16960HepG2GRSF1
CLEC2DENSG00000069493.1091.44010156.46120-0.774902.907201.47220HepG2HNRNPAB
CLEC2DENSG00000069493.10186.8736084.221901.149705.830204.85230HepG2HNRNPC
CLEC2DENSG00000069493.1074.2127036.663501.017202.700101.99110HepG2HNRNPF
CLEC2DENSG00000069493.1033.7614089.25930-1.402604.908703.68330HepG2HNRNPM
CLEC2DENSG00000069493.1067.9317036.102400.911902.085101.45060HepG2IGF2BP1
CLEC2DENSG00000069493.1060.67610126.81870-1.063602.345201.44660HepG2IGF2BP3
CLEC2DENSG00000069493.1044.61390120.84220-1.437605.598504.40390HepG2LARP4
CLEC2DENSG00000069493.1061.21470107.95330-0.818502.405601.35150HepG2LARP7
CLEC2DENSG00000069493.1062.89580113.38840-0.850202.501201.35270HepG2LIN28B
CLEC2DENSG00000069493.1034.02930144.16720-2.0829010.684309.50450HepG2MATR3
CLEC2DENSG00000069493.1042.78270104.70240-1.291204.724403.68810HepG2MSI2
CLEC2DENSG00000069493.10112.1519049.744601.172703.276002.21470HepG2MTPAP
CLEC2DENSG00000069493.1060.98370147.56350-1.274805.711404.81630HepG2NCBP2
CLEC2DENSG00000069493.10110.77850185.88200-0.746703.865702.96420HepG2NOL12
CLEC2DENSG00000069493.10107.5295043.236001.314304.345603.41380HepG2NSUN2
CLEC2DENSG00000069493.1071.85500146.32660-1.026004.991904.30150HepG2PTBP1
CLEC2DENSG00000069493.10117.04920177.43000-0.600102.449901.88430HepG2PUF60
CLEC2DENSG00000069493.1073.36700188.33720-1.3601010.622509.62100HepG2PUM1
CLEC2DENSG00000069493.1055.51140115.31790-1.054804.558703.80530HepG2PUS1
CLEC2DENSG00000069493.10196.18910135.790600.530802.241301.45910HepG2RBM15
CLEC2DENSG00000069493.1064.66110141.45690-1.129405.149104.49630HepG2RBM22
CLEC2DENSG00000069493.1050.45020143.82160-1.511307.965306.87250HepG2RBM25
CLEC2DENSG00000069493.1075.83130130.16940-0.779502.400501.48420HepG2RBM27
CLEC2DENSG00000069493.1054.76980105.70280-0.948602.547501.53050HepG2RCC2
CLEC2DENSG00000069493.10106.28550162.84380-0.615502.226301.73030HepG2NELFE
CLEC2DENSG00000069493.1030.9945070.87520-1.193303.232302.57460HepG2RPS19
CLEC2DENSG00000069493.1046.10660120.05910-1.380705.352604.26050HepG2RPS2
CLEC2DENSG00000069493.1067.68780122.54520-0.856302.692301.63180HepG2RPS5
CLEC2DENSG00000069493.10132.8758074.505000.834603.538202.82570HepG2SAFB2
CLEC2DENSG00000069493.1049.98580171.99420-1.7828011.040809.63200HepG2SF3A3
CLEC2DENSG00000069493.10110.3465048.248701.193404.166903.31710HepG2SF3B1
CLEC2DENSG00000069493.1014.29680109.95850-2.943208.139605.47060HepG2SFPQ
CLEC2DENSG00000069493.1040.3883086.88160-1.105103.616602.89750HepG2SMN1
CLEC2DENSG00000069493.1054.48170115.57790-1.085004.084502.90210HepG2SMNDC1
CLEC2DENSG00000069493.1034.42150159.01010-2.2077014.6081013.70400HepG2SRSF1
CLEC2DENSG00000069493.1076.53720175.17130-1.194507.398806.44180HepG2SRSF5
CLEC2DENSG00000069493.1072.1343036.023001.001702.531601.86340HepG2SRSF7
CLEC2DENSG00000069493.10272.27950129.365901.073509.870408.93950HepG2SRSF9
CLEC2DENSG00000069493.1074.57550199.23080-1.4177011.1656010.05920HepG2SUCLG1
CLEC2DENSG00000069493.10326.62040142.933301.1922011.7840010.75260HepG2TAF15
CLEC2DENSG00000069493.1091.85820186.88220-1.024603.479702.28860HepG2TBRG4
CLEC2DENSG00000069493.10210.88050131.326800.683203.636302.68320HepG2TIA1
CLEC2DENSG00000069493.1046.8099081.28170-0.796102.027701.58580HepG2TIAL1
CLEC2DENSG00000069493.1066.94230110.66770-0.725202.009301.46510HepG2U2AF1
CLEC2DENSG00000069493.1036.13040117.94220-1.706803.982702.78660HepG2U2AF2
CLEC2DENSG00000069493.10111.38240183.44430-0.719802.525101.72710HepG2UBE2L3
CLEC2DENSG00000069493.1074.2325034.818301.092102.756701.99810HepG2UCHL5
CLEC2DENSG00000069493.10143.9554053.955901.415704.936803.57150HepG2UPF2
CLEC2DENSG00000069493.1039.38200147.26460-1.9028011.6103010.51770HepG2UTP3
CLEC2DENSG00000069493.1057.63820124.79150-1.114404.250702.94830HepG2XRCC6
CLEC2DENSG00000069493.10123.4520058.032901.088903.070502.30770HepG2XRN2
CLEC2DENSG00000069493.1046.03740167.75680-1.8655014.8481013.83070HepG2ZNF622
CLEC2DENSG00000069493.1051.9567095.73130-0.881702.714602.15110K562AGGF1
CLEC2DENSG00000069493.10150.6537084.784400.829302.193801.66090K562AQR
CLEC2DENSG00000069493.1091.0357047.128300.949703.056202.30670K562EIF2S2
CLEC2DENSG00000069493.10136.1860049.280201.466406.840105.94100K562HNRNPC
CLEC2DENSG00000069493.10141.8427066.225301.098704.607003.58610K562HSPD1
CLEC2DENSG00000069493.1070.4158030.323901.215302.528901.63900K562KRR1
CLEC2DENSG00000069493.1028.7676074.54060-1.373604.521803.31690K562MATR3
CLEC2DENSG00000069493.10123.3454070.779100.801202.464001.68050K562PCBP3
CLEC2DENSG00000069493.1013.3634050.11170-1.906903.924303.03280K562PRPF8
CLEC2DENSG00000069493.1023.6138072.55600-1.619505.660404.74020K562PTBP1
CLEC2DENSG00000069493.1035.7782098.81890-1.465705.221404.50600K562PUS1
CLEC2DENSG00000069493.1059.2274096.25490-0.700602.006001.48630K562RBM15
CLEC2DENSG00000069493.1037.0878071.12300-0.939402.322701.66780K562SRSF1
CLEC2DENSG00000069493.1026.5658054.45280-1.035402.156001.43060K562SYNCRIP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CLEC2D is not available on ENCORE database.





2 RBPs can affect the splicing of CLEC2D :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECLEC2DENSG00000069493.10chr12+9846420984654498454239845527984735598477020.519000.001700.09906includedHepG2HNRNPL
RICLEC2DENSG00000069493.10chr12+984542398465449845423984552798464209846544-0.179000.002510.01712excludedK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CLEC2D is not avaliable on ENCORE database.