CGNL1

General Information

Gene Name       : CGNL1
Gene ID             : ENSG00000128849.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CGNL1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CGNL1ENSG00000128849.100.000.010.01ENCSR000AEF
HepG2CGNL1ENSG00000128849.108.749.629.18ENCSR985KAT
K562CGNL1ENSG00000128849.100.000.010.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CGNL1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CGNL1 RNA is bound by 7 proteins.  







eCLIP assay for CGNL1 is not avaliable on ENCORE database.





7 proteins are bound to CGNL1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr155784095057841169+3'-UTR3.361976.49835HepG2PRPF4
chr155784101157841133+3'-UTR4.054984.81659HepG2UPF1
chr155773113457731187+CDS3.922563.31827HepG2GRWD1
chr155783590157835971+CDS3.386094.88141HepG2GRWD1
chr155781060557810665+CDS4.416535.11007HepG2GRWD1
chr155781687257816928+CDS3.902243.82000HepG2GRWD1
chr155781063957810695+CDS3.179163.45280HepG2BCLAF1
chr155781687857816942+CDS4.450114.34038HepG2BCLAF1
chr155774596557746052+CDS,intron-Proximal3.916545.05356HepG2PRPF8
chr155774596857746018+CDS,intron-Proximal4.454415.64460HepG2GRWD1
chr155774587957745968+CDS,intron-Proximal4.093088.70622HepG2GRWD1
chr155780905957809146+CDS3.210353.60157HepG2GRWD1
chr155769805657698131+intron-Distal,intron-Proximal5.208899.48199HepG2PTBP1
chr155768602957686114+intron-Distal,intron-Proximal4.626284.51735HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CGNL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CGNL1 is not available on ENCORE database.

  • 108 RBPs can affect the levels of CGNL1.  








The Knockdown/knockout RNA-Seq assay for CGNL1 is not available on ENCORE database.





108 RBPs can affect the gene expression of CGNL1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CGNL1ENSG00000128849.9578.23030840.75310-0.540004.468903.23960HepG2ADAR
CGNL1ENSG00000128849.9916.861901451.50880-0.662805.865805.12460HepG2AKAP1
CGNL1ENSG00000128849.9502.78720999.20750-0.9908015.3782013.77580HepG2AKAP8L
CGNL1ENSG00000128849.91505.137901201.006100.325602.148501.45270HepG2ASCC1
CGNL1ENSG00000128849.91000.935701379.97110-0.463307.160106.13930HepG2AUH
CGNL1ENSG00000128849.9322.40020740.81070-1.2003013.6447011.47110HepG2BCCIP
CGNL1ENSG00000128849.9897.81100643.666300.480003.030702.08890HepG2BCLAF1
CGNL1ENSG00000128849.9423.55130997.89810-1.2364021.1127019.69710HepG2BOP1
CGNL1ENSG00000128849.91272.41270997.013300.351803.040501.74840HepG2BUD13
CGNL1ENSG00000128849.91021.655901743.00590-0.770707.330305.72200HepG2CCAR1
CGNL1ENSG00000128849.9290.14790834.42560-1.5240015.9410014.16190HepG2CNOT7
CGNL1ENSG00000128849.9427.58310916.10950-1.0993015.6177014.14480HepG2CPSF6
CGNL1ENSG00000128849.9311.42620457.53600-0.555003.861802.61230HepG2CSTF2
CGNL1ENSG00000128849.9793.511901127.24460-0.506506.688305.77170HepG2CELF1
CGNL1ENSG00000128849.91024.092701211.96370-0.243002.455701.75170HepG2DAZAP1
CGNL1ENSG00000128849.9597.77620919.75850-0.621605.565004.43350HepG2DDX19B
CGNL1ENSG00000128849.9506.741401004.19040-0.9867015.0034013.57110HepG2DDX21
CGNL1ENSG00000128849.9755.45060982.77190-0.379503.143802.16880HepG2DDX24
CGNL1ENSG00000128849.9820.885701390.44520-0.760308.489107.44360HepG2DDX3X
CGNL1ENSG00000128849.9618.957201124.01350-0.8607011.373809.49360HepG2DDX5
CGNL1ENSG00000128849.91024.39810816.528900.327102.367201.46090HepG2DHX30
CGNL1ENSG00000128849.91387.60920951.424100.544309.130608.04290HepG2DKC1
CGNL1ENSG00000128849.9327.55820846.56530-1.3699030.9981028.93200HepG2DNAJC21
CGNL1ENSG00000128849.9586.60130839.16390-0.516607.506306.50380HepG2DNAJC2
CGNL1ENSG00000128849.9873.852201148.22680-0.393902.688202.10380HepG2EIF2S1
CGNL1ENSG00000128849.9593.37020840.99020-0.503203.171702.21110HepG2EIF3D
CGNL1ENSG00000128849.9914.454601268.93640-0.472603.295602.59970HepG2EIF4A3
CGNL1ENSG00000128849.91429.879101195.763600.257902.906302.05250HepG2EIF4G1
CGNL1ENSG00000128849.9829.459401145.44940-0.465703.854102.90410HepG2EIF4G2
CGNL1ENSG00000128849.92115.372601584.489900.416806.717905.84850HepG2ETF1
CGNL1ENSG00000128849.9722.58370971.84960-0.427603.828002.84520HepG2EWSR1
CGNL1ENSG00000128849.9670.12490957.00730-0.514104.993303.52410HepG2FASTKD2
CGNL1ENSG00000128849.91012.067101343.62040-0.408802.597601.84970HepG2FIP1L1
CGNL1ENSG00000128849.9843.634801170.94780-0.473002.453101.39850HepG2FUS
CGNL1ENSG00000128849.91685.900101280.270800.397002.997002.27560HepG2FXR1
CGNL1ENSG00000128849.9698.703801187.65620-0.765407.965006.86760HepG2G3BP1
CGNL1ENSG00000128849.9580.43480977.11510-0.751407.445305.76200HepG2GNB2L1
CGNL1ENSG00000128849.9402.36550772.34890-0.940707.603305.77520HepG2GRSF1
CGNL1ENSG00000128849.9744.062301103.16060-0.568103.344601.60930HepG2GTF2F1
CGNL1ENSG00000128849.9490.24200705.13100-0.524402.843501.45180HepG2HNRNPA0
CGNL1ENSG00000128849.91244.92150854.676400.542505.640004.76080HepG2HNRNPA1
CGNL1ENSG00000128849.9929.018601113.87810-0.261802.226901.37950HepG2HNRNPA2B1
CGNL1ENSG00000128849.9309.35790950.69410-1.6197031.8499029.80130HepG2HNRNPC
CGNL1ENSG00000128849.9936.253001103.97550-0.237702.270001.65130HepG2HNRNPL
CGNL1ENSG00000128849.91561.35960991.005600.655707.386206.41560HepG2HNRNPLL
CGNL1ENSG00000128849.9725.91320927.10400-0.352902.649301.71650HepG2HNRNPM
CGNL1ENSG00000128849.9895.070701354.22710-0.597404.676203.08400HepG2HSPD1
CGNL1ENSG00000128849.9887.262901207.23270-0.444303.442302.69710HepG2IGF2BP2
CGNL1ENSG00000128849.9768.37430964.67610-0.328203.935803.07660HepG2ILF2
CGNL1ENSG00000128849.91166.99190909.110400.360205.001803.63730HepG2KIF1C
CGNL1ENSG00000128849.91280.412701840.38050-0.523403.959402.96170HepG2LARP4
CGNL1ENSG00000128849.9645.213901005.17590-0.639606.413804.60700HepG2LIN28B
CGNL1ENSG00000128849.9617.298101280.71760-1.0529014.9159013.44850HepG2MAGOH
CGNL1ENSG00000128849.9880.828901287.89100-0.548104.268903.50160HepG2MATR3
CGNL1ENSG00000128849.9598.36590880.22260-0.556802.672201.63770HepG2METAP2
CGNL1ENSG00000128849.9655.214001087.53950-0.731009.506208.09090HepG2MSI2
CGNL1ENSG00000128849.91398.106001010.788900.467902.345601.45920HepG2MTPAP
CGNL1ENSG00000128849.91172.89310913.186900.361003.116501.82420HepG2NAA15
CGNL1ENSG00000128849.9853.843101318.23240-0.626605.737504.84070HepG2NCBP2
CGNL1ENSG00000128849.91815.94430878.746601.0471019.0914017.35180HepG2NSUN2
CGNL1ENSG00000128849.91431.761401091.627800.391205.394004.34860HepG2PRPF4
CGNL1ENSG00000128849.9821.766001165.40180-0.504002.797101.57370HepG2PRPF6
CGNL1ENSG00000128849.9668.788201092.46040-0.708003.443201.46790HepG2PSIP1
CGNL1ENSG00000128849.9910.146001238.78800-0.444803.993103.36260HepG2PTBP1
CGNL1ENSG00000128849.9887.021701147.23800-0.371102.926702.31650HepG2PUF60
CGNL1ENSG00000128849.9730.919501217.87650-0.7366010.053409.07090HepG2PUM1
CGNL1ENSG00000128849.9930.963601216.96660-0.386503.644702.87990HepG2PUM2
CGNL1ENSG00000128849.91730.029001341.426100.366903.867203.14530HepG2QKI
CGNL1ENSG00000128849.9682.352601069.94200-0.648903.478802.69020HepG2RAVER1
CGNL1ENSG00000128849.9264.787901324.31980-2.3223076.5174074.54300HepG2RBM22
CGNL1ENSG00000128849.9743.772001154.18980-0.633906.071404.59620HepG2RBM27
CGNL1ENSG00000128849.9940.807001378.56950-0.551205.476104.75640HepG2NELFE
CGNL1ENSG00000128849.9536.74040832.16420-0.632606.593905.60340HepG2RPLP0
CGNL1ENSG00000128849.9369.65860818.25390-1.1464011.8299010.66320HepG2RPS19
CGNL1ENSG00000128849.9560.129901064.50000-0.9263011.9376010.37240HepG2RPS2
CGNL1ENSG00000128849.9758.938901086.59000-0.517804.369003.00440HepG2RPS5
CGNL1ENSG00000128849.9787.56870555.709400.503002.983402.17070HepG2RRP9
CGNL1ENSG00000128849.9774.711401163.59870-0.586903.084801.47380HepG2RTF1
CGNL1ENSG00000128849.9690.71240841.02160-0.284102.082901.51110HepG2SAFB2
CGNL1ENSG00000128849.9811.864101547.58100-0.9307010.190408.83140HepG2SF3A3
CGNL1ENSG00000128849.91663.64430980.875500.7621010.637609.33760HepG2SF3B1
CGNL1ENSG00000128849.91466.864601100.089600.415007.386706.32500HepG2SLBP
CGNL1ENSG00000128849.9768.67380980.74890-0.351504.222103.45710HepG2SMN1
CGNL1ENSG00000128849.9333.485001089.96660-1.7086019.0766016.58980HepG2SMNDC1
CGNL1ENSG00000128849.9649.455301091.40470-0.748905.101804.03010HepG2SNRNP70
CGNL1ENSG00000128849.9741.056101495.73430-1.0132031.9342030.71830HepG2SRFBP1
CGNL1ENSG00000128849.91022.422501346.09420-0.396803.192802.69440HepG2SRSF1
CGNL1ENSG00000128849.9675.393401055.49450-0.644104.706503.36700HepG2SRSF3
CGNL1ENSG00000128849.9838.474601132.76970-0.434005.396204.56370HepG2SRSF5
CGNL1ENSG00000128849.91526.867701298.588200.233502.381501.89810HepG2SSB
CGNL1ENSG00000128849.9865.586201349.19350-0.640305.760303.99610HepG2SSRP1
CGNL1ENSG00000128849.9373.39420897.54170-1.2653013.9398011.46140HepG2STAU1
CGNL1ENSG00000128849.9486.24440728.33320-0.582903.826502.51350HepG2STIP1
CGNL1ENSG00000128849.91083.783601288.23760-0.249301.930801.39360HepG2SUCLG1
CGNL1ENSG00000128849.9675.05980907.36350-0.426703.390002.35570HepG2SUPT6H
CGNL1ENSG00000128849.9942.17690725.070400.377801.878401.30680HepG2SUPV3L1
CGNL1ENSG00000128849.91699.196801210.123800.489605.952605.18230HepG2TAF15
CGNL1ENSG00000128849.9758.90490966.03520-0.348202.336101.66300HepG2TARDBP
CGNL1ENSG00000128849.9697.08480925.87700-0.409504.865104.15980HepG2TRIM56
CGNL1ENSG00000128849.9899.558901120.85640-0.317302.343301.54640HepG2TUFM
CGNL1ENSG00000128849.9721.661301149.43750-0.671507.087106.09120HepG2U2AF1
CGNL1ENSG00000128849.91117.311101372.47110-0.296703.590002.81090HepG2UPF1
CGNL1ENSG00000128849.9451.75960663.85710-0.555303.021301.97110HepG2UPF2
CGNL1ENSG00000128849.9588.816301325.06180-1.1702034.6094032.84880HepG2UTP3
CGNL1ENSG00000128849.9637.510201176.47770-0.884006.647805.05320HepG2XRCC6
CGNL1ENSG00000128849.9528.837901077.29600-1.0265027.3357025.62860HepG2ZC3H8
CGNL1ENSG00000128849.9833.297801509.45070-0.8571026.6486025.39260HepG2ZNF622
CGNL1ENSG00000128849.935.149800.0000099999.999909.134107.76950K562PRPF8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CGNL1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CGNL1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CGNL1 is not avaliable on ENCORE database.