CAMTA2

General Information

Gene Name       : CAMTA2
Gene ID             : ENSG00000108509.20
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CAMTA2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CAMTA2ENSG00000108509.204.5810.847.71ENCSR000AEF
HepG2CAMTA2ENSG00000108509.2016.166.0211.09ENCSR985KAT
K562CAMTA2ENSG00000108509.2016.3913.8015.10ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CAMTA2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CAMTA2 RNA is bound by 18 proteins.  







eCLIP assay for CAMTA2 is not avaliable on ENCORE database.





18 proteins are bound to CAMTA2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1748718294871934-3'-UTR,intron-Distal3.7718613.36215HepG2PCBP2
chr1748716074871694-3'-UTR,intron-Distal,intron-Proximal4.3175312.75817HepG2RBFOX2
chr1748713584871421-3'-UTR,intron-Distal,intron-Proximal3.951458.69108HepG2RBFOX2
chr1748776374877709-3'-UTR,CDS,intron-Distal,intron-Proximal3.716535.43815HepG2PRPF8
chr1748714444871491-3'-UTR,intron-Distal6.1285623.74538K562PUM2
chr1748714914871619-3'-UTR,intron-Distal,intron-Proximal6.0559864.24973K562PUM2
chr1748849704885016-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.318434.24993HepG2PPIG
chr1748837564883839-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.985446.17200HepG2PCBP2
chr1748836894883756-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.341154.74917HepG2PCBP2
chr1748846254884728-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.684717.02785HepG2SF3A3
chr1748717844871811-3'-UTR,intron-Distal4.460444.17937HepG2PCBP2
chr1748729734872996-3'-UTR,CDS,intron-Distal3.903393.16051HepG2PPIG
chr1748776984877745-3'-UTR,CDS,intron-Distal4.590124.97342HepG2PPIG
chr1748849804885041-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.698833.12746HepG2GRWD1
chr1748715334871707-3'-UTR,intron-Distal,intron-Proximal4.5716418.95097HepG2PCBP2
chr1748837184883828-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.526767.20917HepG2HNRNPK
chr1748836554883746-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.791624.21358HepG2U2AF2
chr1748714664871588-3'-UTR,intron-Distal4.9245920.49247HepG2RBFOX2
chr1748720684872114-3'-UTR,CDS,intron-Distal,intron-Proximal3.788094.68902HepG2PPIG
chr1748831054883155-5'-UTR,CDS,intron-Distal3.247313.34231K562RBM15
chr1748803474880404-5'-UTR,CDS,intron-Distal,intron-Proximal4.672773.12971K562TROVE2
chr1748860784886153-CDS,intron-Distal,intron-Proximal3.057413.40321HepG2GRWD1
chr1748860924886151-CDS,intron-Distal,intron-Proximal3.759995.21950K562DDX24
chr1748863374886408-CDS,intron-Distal,intron-Proximal5.113089.00594HepG2SF3B4
chr1748860794886168-CDS,intron-Distal,intron-Proximal3.195383.92909K562GRWD1
chr1748863304886388-CDS,intron-Distal,intron-Proximal4.9064325.82062K562SF3B4
chr1748862704886322-CDS,intron-Distal,intron-Proximal4.191186.36347HepG2PPIG
chr1748861584886188-CDS,intron-Distal,intron-Proximal4.478934.97342HepG2PPIG
chr1748891824889230-CDS,intron-Distal3.076435.74131HepG2PPIG
chr1748877774887863-intron-Distal3.660864.09735K562ILF3
chr1748896244889730-intron-Distal,intron-Proximal3.426368.30632HepG2PCBP2
chr1748878184887875-intron-Distal4.578866.23114K562TARDBP
chr1748896054889723-intron-Distal,intron-Proximal3.511844.34008K562HNRNPK
chr1748785244878798-intron-Distal6.8919627.02834K562PTBP1
chr1748896054889676-intron-Distal,intron-Proximal4.660463.23168HepG2DDX59
chr1748786964878765-intron-Distal3.992843.74583HepG2PTBP1
chr1748901084890157-intron-Distal4.583673.11886K562DROSHA
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CAMTA2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CAMTA2 is not available on ENCORE database.

  • 94 RBPs can affect the levels of CAMTA2.  








The Knockdown/knockout RNA-Seq assay for CAMTA2 is not available on ENCORE database.





94 RBPs can affect the gene expression of CAMTA2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CAMTA2ENSG00000108509.16786.97520649.962000.275902.367201.79790HepG2ACO1
CAMTA2ENSG00000108509.16834.29330511.104900.706802.427301.92570HepG2AKAP1
CAMTA2ENSG00000108509.161294.82010916.827600.497904.849603.04590HepG2ATP5C1
CAMTA2ENSG00000108509.16949.22120769.911500.302002.647201.97440HepG2AUH
CAMTA2ENSG00000108509.161338.59220847.549500.659208.070507.11220HepG2BOP1
CAMTA2ENSG00000108509.161057.81670761.260200.474504.250702.74360HepG2BUD13
CAMTA2ENSG00000108509.16961.74930649.823700.565509.278908.20090HepG2CKAP4
CAMTA2ENSG00000108509.16183.84190280.99330-0.612102.647701.59210HepG2CSTF2
CAMTA2ENSG00000108509.161077.98410510.953301.0770025.7629024.20910HepG2CELF1
CAMTA2ENSG00000108509.16794.63700549.337600.532507.626606.48590HepG2DAZAP1
CAMTA2ENSG00000108509.16547.12290389.914400.488602.498801.40270HepG2DDX1
CAMTA2ENSG00000108509.16869.64080489.498900.829005.615504.75320HepG2DDX3X
CAMTA2ENSG00000108509.16784.82930447.522300.810303.343502.50320HepG2DDX55
CAMTA2ENSG00000108509.16706.19690420.727200.747105.534104.68700HepG2DDX6
CAMTA2ENSG00000108509.16484.48700382.325200.341602.202001.56750HepG2DNAJC21
CAMTA2ENSG00000108509.16678.15730378.987300.839409.654608.52570HepG2DNAJC2
CAMTA2ENSG00000108509.16943.66130404.219601.2230017.0647015.68060HepG2EIF2S1
CAMTA2ENSG00000108509.161035.27930770.781900.425503.774302.40900HepG2EIF2S2
CAMTA2ENSG00000108509.16531.49780754.48710-0.505403.583201.57580HepG2EIF3H
CAMTA2ENSG00000108509.16619.07990435.041600.508902.030301.43610HepG2EIF4B
CAMTA2ENSG00000108509.16633.88420880.21470-0.473603.943502.65850HepG2ESF1
CAMTA2ENSG00000108509.161224.50590884.035800.469906.352905.50410HepG2ETF1
CAMTA2ENSG00000108509.161852.508401026.119300.8522010.000008.65720HepG2FIP1L1
CAMTA2ENSG00000108509.16592.09170378.512400.645405.452904.36110HepG2FUBP3
CAMTA2ENSG00000108509.16753.64840450.941800.740905.078604.16160HepG2FXR1
CAMTA2ENSG00000108509.16965.43600418.133101.2071016.3130014.76130HepG2G3BP1
CAMTA2ENSG00000108509.16807.32000620.529400.379503.958402.80390HepG2HDGF
CAMTA2ENSG00000108509.16674.13190504.887200.417003.910502.82880HepG2HNRNPA2B1
CAMTA2ENSG00000108509.161013.78090824.768100.297602.542701.85420HepG2HNRNPF
CAMTA2ENSG00000108509.16821.28770423.821400.954309.380508.15530HepG2HNRNPK
CAMTA2ENSG00000108509.16782.33610426.513800.8751015.6536014.30890HepG2HNRNPU
CAMTA2ENSG00000108509.16638.65450424.958600.587603.720102.94740HepG2IGF2BP2
CAMTA2ENSG00000108509.16631.97440435.667600.536506.749505.65490HepG2ILF2
CAMTA2ENSG00000108509.16499.82150364.877700.453902.400701.34780HepG2LARP7
CAMTA2ENSG00000108509.16733.59930416.292300.817304.697503.34720HepG2METAP2
CAMTA2ENSG00000108509.161042.36250830.328800.328002.258601.52440HepG2MSI2
CAMTA2ENSG00000108509.161160.31480464.207901.3216020.2102018.60180HepG2NCBP2
CAMTA2ENSG00000108509.16740.90350544.725400.443703.523802.66370HepG2NOL12
CAMTA2ENSG00000108509.16507.18900746.36510-0.557404.361203.42710HepG2NSUN2
CAMTA2ENSG00000108509.16686.54610435.675500.656003.311002.33420HepG2PABPC1
CAMTA2ENSG00000108509.16881.71070413.197801.0934011.9596010.48600HepG2PABPC4
CAMTA2ENSG00000108509.16649.97300409.191500.667507.021006.12640HepG2PCBP1
CAMTA2ENSG00000108509.16542.79730380.414100.512702.156101.49760HepG2PPIL4
CAMTA2ENSG00000108509.16506.51340673.06640-0.410103.916503.01110HepG2PRPF4
CAMTA2ENSG00000108509.16790.51200416.407800.9247016.6121015.48850HepG2PTBP1
CAMTA2ENSG00000108509.161011.73850520.005400.9601015.2635014.01690HepG2PUF60
CAMTA2ENSG00000108509.161102.34680552.029000.9977028.7545027.24610HepG2PUM1
CAMTA2ENSG00000108509.16766.44920450.894400.7653010.025008.94110HepG2QKI
CAMTA2ENSG00000108509.161375.63960993.064200.470005.640704.46970HepG2RBM15
CAMTA2ENSG00000108509.16659.34680409.248000.688007.159006.11570HepG2RBM25
CAMTA2ENSG00000108509.16610.65600440.001800.472802.534301.58840HepG2RBM27
CAMTA2ENSG00000108509.16682.41330387.088700.817909.171408.12810HepG2RPS19
CAMTA2ENSG00000108509.16616.61380379.822000.698908.262707.23870HepG2SAFB2
CAMTA2ENSG00000108509.16559.65130388.455400.526703.318802.28480HepG2SERBP1
CAMTA2ENSG00000108509.161110.70210833.162300.414703.349902.58070HepG2SF3B1
CAMTA2ENSG00000108509.16818.75690433.462300.9174016.0816014.83550HepG2SF3B4
CAMTA2ENSG00000108509.16869.65450366.088501.248204.012202.20810HepG2SFPQ
CAMTA2ENSG00000108509.16648.39030442.924000.549706.816805.87720HepG2SMN1
CAMTA2ENSG00000108509.16681.99090378.611400.848905.765804.34900HepG2SMNDC1
CAMTA2ENSG00000108509.16848.32670337.172201.331005.291303.32970HepG2SNRNP200
CAMTA2ENSG00000108509.16661.54760927.03860-0.486802.413201.68580HepG2SNRNP70
CAMTA2ENSG00000108509.161010.25830834.504600.275602.183801.72210HepG2SRFBP1
CAMTA2ENSG00000108509.16591.14080896.48050-0.600804.061802.82470HepG2SRSF3
CAMTA2ENSG00000108509.16768.85290513.453900.582407.641606.66990HepG2SRSF5
CAMTA2ENSG00000108509.16577.51270416.727500.470602.416801.39800HepG2STIP1
CAMTA2ENSG00000108509.16891.31150583.917700.610105.291104.47990HepG2SUCLG1
CAMTA2ENSG00000108509.161259.87610820.432000.618706.783505.71610HepG2TARDBP
CAMTA2ENSG00000108509.161683.52010940.498200.839904.079502.80190HepG2TBRG4
CAMTA2ENSG00000108509.16489.44870373.688300.389202.592701.78120HepG2TIA1
CAMTA2ENSG00000108509.16873.29220418.145701.0624023.6373022.18750HepG2TRIM56
CAMTA2ENSG00000108509.16897.71610391.950901.195504.052902.84630HepG2U2AF2
CAMTA2ENSG00000108509.161149.77700537.791501.096106.273804.98130HepG2UBE2L3
CAMTA2ENSG00000108509.161484.33890883.801100.7479021.2036020.03830HepG2ZNF622
CAMTA2ENSG00000108509.16886.504801141.67630-0.365002.563901.99410K562AQR
CAMTA2ENSG00000108509.16703.73880536.446600.391503.607102.07020K562DDX27
CAMTA2ENSG00000108509.16784.70700599.315100.388702.815101.76430K562DDX3X
CAMTA2ENSG00000108509.161731.499301390.535800.316302.937702.26760K562DDX47
CAMTA2ENSG00000108509.161088.68210820.934700.407103.056101.65590K562DHX30
CAMTA2ENSG00000108509.16477.48530297.639300.681806.189405.01640K562EIF3G
CAMTA2ENSG00000108509.1681.25040250.80230-1.6261011.8831010.21190K562G3BP2
CAMTA2ENSG00000108509.16876.23620605.143000.533905.049603.44630K562HNRNPF
CAMTA2ENSG00000108509.16685.68430387.583500.822904.536003.09000K562IGF2BP2
CAMTA2ENSG00000108509.16941.88820687.318600.454503.352301.70250K562LIN28B
CAMTA2ENSG00000108509.161395.412601144.760200.285503.109102.25300K562MTPAP
CAMTA2ENSG00000108509.16916.31840667.223600.457603.140101.59200K562NUSAP1
CAMTA2ENSG00000108509.16428.58150599.31640-0.483702.705901.96430K562PRPF8
CAMTA2ENSG00000108509.16907.02420607.565600.578005.457504.12960K562PSIP1
CAMTA2ENSG00000108509.16971.900901251.51350-0.364801.992701.51740K562PUS1
CAMTA2ENSG00000108509.16395.35060280.712200.493903.345801.35860K562QKI
CAMTA2ENSG00000108509.16615.07460369.478400.735203.877602.14210K562RBM34
CAMTA2ENSG00000108509.16870.06540554.360700.650207.651805.99900K562RCC2
CAMTA2ENSG00000108509.16689.57780490.344200.491802.987901.94380K562RPS3
CAMTA2ENSG00000108509.161333.50590834.757700.675709.076407.18000K562SAFB
CAMTA2ENSG00000108509.16416.89220260.856600.676305.900504.61730K562SF3B4
CAMTA2ENSG00000108509.161469.84550858.841500.775103.460301.94250K562SFPQ
CAMTA2ENSG00000108509.16838.11710525.515400.673306.908405.07960K562SRFBP1
CAMTA2ENSG00000108509.16545.58650387.613700.493102.158401.52530K562SRSF1
CAMTA2ENSG00000108509.16725.98370473.383100.616805.626204.02010K562SRSF4
CAMTA2ENSG00000108509.16623.57530366.200400.767804.058902.74510K562SRSF5
CAMTA2ENSG00000108509.16146.37850246.19760-0.750102.774401.31030K562TAF15
CAMTA2ENSG00000108509.16849.93000392.178401.115705.939204.87450K562TARDBP
CAMTA2ENSG00000108509.16690.46620378.329800.867807.523206.07020K562TIA1
CAMTA2ENSG00000108509.16780.84730584.372100.418102.612801.70520K562TIAL1
CAMTA2ENSG00000108509.16630.04360371.518900.761905.376003.74020K562TRA2A
CAMTA2ENSG00000108509.161026.38600620.859700.725108.543006.67560K562TRIM56
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CAMTA2 is not available on ENCORE database.





6 RBPs can affect the splicing of CAMTA2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECAMTA2ENSG00000108509.16chr17-488538348855224884972488512648860514886187-0.286000.002230.03990excludedHepG2U2AF1
SECAMTA2ENSG00000108509.16chr17-488538348854554884972488512648860514886187-0.244000.005940.06083excludedHepG2U2AF2
SECAMTA2ENSG00000108509.16chr17-487552648758314873634487383148760634876286-0.098000.000820.01031excludedK562AQR
SECAMTA2ENSG00000108509.16chr17-488538348854554884972488512648860514886187-0.534000.000020.00081excludedK562U2AF1
SECAMTA2ENSG00000108509.16chr17-488538348854554884972488512648860514886187-0.481000.000020.00062excludedK562U2AF2
A3SSCAMTA2ENSG00000108509.16chr17-4885383488552248853834885455488605148861500.357000.000810.04434longerK562SF3B4
A3SSCAMTA2ENSG00000108509.16chr17-4885383488547048853834885455488605148861870.288000.000120.00444longerHepG2U2AF2
A3SSCAMTA2ENSG00000108509.16chr17-4872201487230148722014872276487244448726600.053000.004030.02391longerK562AQR
A3SSCAMTA2ENSG00000108509.16chr17-4885383488552248853834885455488605148861870.301000.003400.02060longerK562AQR
A3SSCAMTA2ENSG00000108509.16chr17-4881798488195348817984881925488297848839160.068000.004490.02627longerK562AQR
A3SSCAMTA2ENSG00000108509.16chr17-4885383488552248853834885455488605148861500.334000.000010.00280longerK562HNRNPC
MXECAMTA2ENSG00000108509.16chr17-488497248851264885383488547048845194884654488605148861870.117000.003960.025121includedHepG2U2AF2
MXECAMTA2ENSG00000108509.16chr17-488497248850374885383488547048845194884654488605148861870.123000.002080.015081includedHepG2U2AF2
MXECAMTA2ENSG00000108509.16chr17-488497248851264885383488545548845194884654488605148861870.187000.004720.061971includedHepG2HNRNPUL1
MXECAMTA2ENSG00000108509.16chr17-488497248850374885383488545548845194884654488605148861870.200000.000910.017721includedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CAMTA2 is not avaliable on ENCORE database.