ZNHIT1

General Information

Gene Name       : ZNHIT1
Gene ID             : ENSG00000106400.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNHIT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNHIT1ENSG00000106400.114.7820.5512.67ENCSR000AEF
HepG2ZNHIT1ENSG00000106400.1129.2022.6325.91ENCSR985KAT
K562ZNHIT1ENSG00000106400.1172.6554.8663.76ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNHIT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNHIT1 RNA is bound by 16 proteins.  







eCLIP assay for ZNHIT1 is not avaliable on ENCORE database.





16 proteins are bound to ZNHIT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7100867298100867374+3'-UTR3.441258.05301K562IGF2BP2
chr7100867227100867285+3'-UTR,CDS6.130018.90713K562RPS3
chr7100867353100867422+3'-UTR4.7516214.77819K562YBX3
chr7100867302100867353+3'-UTR3.2967016.17113K562YBX3
chr7100867412100867457+3'-UTR5.313759.39648K562PABPC4
chr7100867231100867293+3'-UTR,CDS5.9884415.36878HepG2LARP4
chr7100867298100867347+3'-UTR4.3894717.65258HepG2LARP4
chr7100867297100867401+3'-UTR3.135533.02821K562IGF2BP1
chr7100867362100867408+3'-UTR4.756016.24350K562PABPC4
chr7100867299100867346+3'-UTR3.852757.27995K562PABPC4
chr7100861473100861546+5'-UTR,CDS,intron-Proximal3.7245110.59445HepG2PRPF8
chr7100861462100861500+5'-UTR,CDS,intron-Proximal3.241474.32211K562DDX3X
chr7100861463100861499+5'-UTR,CDS,intron-Proximal5.2981720.07970HepG2SUB1
chr7100865883100866022+CDS,intron-Proximal3.125337.85699HepG2RPS3
chr7100867027100867088+CDS3.043578.35067K562YBX3
chr7100865963100866043+CDS3.269743.81620HepG2LARP4
chr7100866956100867011+CDS4.459244.88658HepG2SUB1
chr7100865964100865984+CDS3.252396.56666K562YBX3
chr7100867020100867117+CDS4.7025017.79951HepG2LARP4
chr7100866954100867020+CDS4.298886.89681K562PABPC4
chr7100866792100866837+CDS4.124044.23295HepG2GRWD1
chr7100867016100867096+CDS5.429476.97758HepG2DDX55
chr7100867088100867103+CDS4.377675.13745K562YBX3
chr7100866953100867031+CDS,intron-Proximal3.390313.52724HepG2PABPN1
chr7100866792100866837+CDS3.259523.86174K562DDX55
chr7100865884100865964+CDS,intron-Proximal5.0162421.56271HepG2SUB1
chr7100865699100865760+intron-Distal3.160293.11118HepG2PRPF4
chr7100865376100865440+intron-Distal4.221133.69238K562GTF2F1
chr7100865366100865441+intron-Distal4.160294.36329HepG2PRPF4
chr7100865358100865460+intron-Distal3.787035.16644HepG2FAM120A
chr7100866901100866941+intron-Proximal4.861685.40008K562SF3B4
chr7100866872100866941+intron-Proximal4.011033.25678HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNHIT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNHIT1 is not available on ENCORE database.

  • 82 RBPs can affect the levels of ZNHIT1.  








The Knockdown/knockout RNA-Seq assay for ZNHIT1 is not available on ENCORE database.





82 RBPs can affect the gene expression of ZNHIT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNHIT1ENSG00000106400.7711.53430501.993500.503202.311101.45800HepG2BCCIP
ZNHIT1ENSG00000106400.71237.47990916.830400.432603.329602.48650HepG2CIRBP
ZNHIT1ENSG00000106400.7756.90270603.550000.326503.122702.42560HepG2CKAP4
ZNHIT1ENSG00000106400.7482.54940317.520400.603703.408402.65280HepG2CPSF6
ZNHIT1ENSG00000106400.7884.18490738.319700.260002.278701.59700HepG2DAZAP1
ZNHIT1ENSG00000106400.7622.43310478.152600.380302.362801.72940HepG2DDX21
ZNHIT1ENSG00000106400.7485.75910370.164100.392002.276701.38830HepG2DHX30
ZNHIT1ENSG00000106400.7716.19920577.640600.310102.375101.74030HepG2DKC1
ZNHIT1ENSG00000106400.7550.81180383.792700.521103.597002.80150HepG2DNAJC21
ZNHIT1ENSG00000106400.7582.68020380.388200.615107.712906.69590HepG2DNAJC2
ZNHIT1ENSG00000106400.7707.32680992.75850-0.489102.741902.05500HepG2EIF4B
ZNHIT1ENSG00000106400.7597.53870750.63580-0.329102.151601.45160HepG2FUBP3
ZNHIT1ENSG00000106400.7782.046301028.91550-0.395802.003501.41070HepG2FXR1
ZNHIT1ENSG00000106400.7525.86100359.900300.547003.141402.46430HepG2GPKOW
ZNHIT1ENSG00000106400.7714.74290576.383300.310302.611801.65910HepG2HDGF
ZNHIT1ENSG00000106400.7719.06010430.982900.738407.234206.15460HepG2HNRNPC
ZNHIT1ENSG00000106400.7725.16940587.467500.303701.954901.34520HepG2HNRNPF
ZNHIT1ENSG00000106400.7859.99550672.566800.354603.748802.97210HepG2HNRNPL
ZNHIT1ENSG00000106400.7586.53450343.462600.772006.388705.47660HepG2HNRNPLL
ZNHIT1ENSG00000106400.7743.55160578.486000.362102.683201.96980HepG2IGF2BP1
ZNHIT1ENSG00000106400.7560.46790437.325400.357803.298902.50450HepG2ILF2
ZNHIT1ENSG00000106400.7547.29210990.88930-0.8564016.9094015.61480HepG2PCBP1
ZNHIT1ENSG00000106400.7515.59670381.862100.433102.620101.90180HepG2PPIL4
ZNHIT1ENSG00000106400.7728.182601008.28780-0.469505.985105.24320HepG2PTBP1
ZNHIT1ENSG00000106400.7908.96620698.853800.379102.813502.21240HepG2PUF60
ZNHIT1ENSG00000106400.7797.43080614.990000.374703.905203.19780HepG2PUS1
ZNHIT1ENSG00000106400.7767.069301091.95600-0.509505.902305.03860HepG2QKI
ZNHIT1ENSG00000106400.7620.36680881.88190-0.507505.414104.75010HepG2RBM22
ZNHIT1ENSG00000106400.7773.86420991.03710-0.356902.781702.10510HepG2RBM25
ZNHIT1ENSG00000106400.7716.246901122.11020-0.6477010.443109.51580HepG2NELFE
ZNHIT1ENSG00000106400.7766.235301045.12470-0.447805.460604.63100HepG2RECQL
ZNHIT1ENSG00000106400.7649.84070495.630800.390702.209001.49000HepG2RPS2
ZNHIT1ENSG00000106400.7558.33800381.275200.550205.764104.88730HepG2SAFB2
ZNHIT1ENSG00000106400.7756.323801049.72020-0.472906.053905.23660HepG2SF3B4
ZNHIT1ENSG00000106400.7795.70150670.060800.247801.951201.34330HepG2SLBP
ZNHIT1ENSG00000106400.7734.31560501.625500.549702.723201.77600HepG2SMNDC1
ZNHIT1ENSG00000106400.7638.103101095.69600-0.7800014.6982013.79210HepG2SRSF1
ZNHIT1ENSG00000106400.7719.98570577.173300.318902.457501.79850HepG2SRSF7
ZNHIT1ENSG00000106400.7571.32970891.42020-0.6418010.155809.21470HepG2SRSF9
ZNHIT1ENSG00000106400.71319.74020864.780200.6097011.6927010.78100HepG2SSB
ZNHIT1ENSG00000106400.7508.53420984.89680-0.9536017.9860016.73570HepG2TAF15
ZNHIT1ENSG00000106400.7631.60360904.94090-0.518805.416804.25870HepG2TIA1
ZNHIT1ENSG00000106400.7800.06790416.031200.9433014.5652013.57700HepG2TIAL1
ZNHIT1ENSG00000106400.7616.81640419.729600.555306.243605.45800HepG2TRIM56
ZNHIT1ENSG00000106400.7476.98470290.189600.716804.852303.84130HepG2UCHL5
ZNHIT1ENSG00000106400.7804.02640629.275700.353503.431102.66760HepG2UPF1
ZNHIT1ENSG00000106400.7692.55600449.723400.622802.883601.85850HepG2UPF2
ZNHIT1ENSG00000106400.7812.09060646.824100.328202.834901.77570HepG2UTP18
ZNHIT1ENSG00000106400.7309.83630483.17010-0.641003.214001.84410HepG2XRCC5
ZNHIT1ENSG00000106400.7721.14530483.644900.576203.343002.55110HepG2XRN2
ZNHIT1ENSG00000106400.7634.30850504.797500.329402.746202.07620HepG2ZC3H8
ZNHIT1ENSG00000106400.7863.36970692.085900.318903.385702.79810HepG2ZNF622
ZNHIT1ENSG00000106400.71463.337601051.785900.476307.417606.55360K562AGGF1
ZNHIT1ENSG00000106400.71554.254401155.713800.427304.126202.87290K562AKAP8
ZNHIT1ENSG00000106400.71585.644001094.421100.534804.429503.59640K562AKAP8L
ZNHIT1ENSG00000106400.71710.024901374.413700.315102.404301.85120K562AQR
ZNHIT1ENSG00000106400.71330.312701778.73730-0.419104.631203.35930K562CELF1
ZNHIT1ENSG00000106400.7818.378401017.98130-0.314902.974102.29990K562DDX47
ZNHIT1ENSG00000106400.7422.79900587.47170-0.474503.183501.73810K562DNAJC21
ZNHIT1ENSG00000106400.7700.66530453.567600.627305.229803.95260K562EFTUD2
ZNHIT1ENSG00000106400.71224.21900844.356600.535807.594706.49090K562EIF2S2
ZNHIT1ENSG00000106400.7362.09180555.69520-0.617902.951301.91010K562EIF3A
ZNHIT1ENSG00000106400.71176.402301446.32170-0.298003.555002.49050K562EIF4G2
ZNHIT1ENSG00000106400.7884.78520559.798700.660306.934705.53760K562FIP1L1
ZNHIT1ENSG00000106400.7161.73150343.63290-1.087303.079402.32650K562G3BP2
ZNHIT1ENSG00000106400.71667.097501125.074300.567205.416204.35510K562GRSF1
ZNHIT1ENSG00000106400.7753.076601027.02400-0.447603.641102.40470K562HNRNPA1
ZNHIT1ENSG00000106400.7819.44520460.468500.831408.211106.46860K562HNRNPM
ZNHIT1ENSG00000106400.7826.277501137.44660-0.461103.321502.34470K562HNRNPU
ZNHIT1ENSG00000106400.71048.20060758.931700.465803.912002.96940K562HSPD1
ZNHIT1ENSG00000106400.7839.13050575.468200.544103.471602.27410K562IGF2BP2
ZNHIT1ENSG00000106400.71459.994601161.488700.329902.595901.79930K562KIF1C
ZNHIT1ENSG00000106400.71514.889901111.802600.446203.936902.58160K562MAK16
ZNHIT1ENSG00000106400.7753.02730916.72890-0.283802.830702.07660K562NSUN2
ZNHIT1ENSG00000106400.71710.63260805.127601.087107.478005.58030K562PABPN1
ZNHIT1ENSG00000106400.71110.44100635.519800.8050010.428608.54530K562PPIG
ZNHIT1ENSG00000106400.7761.31210441.374900.786407.620206.36960K562PRPF8
ZNHIT1ENSG00000106400.7851.19250587.356900.535105.599004.68330K562PTBP1
ZNHIT1ENSG00000106400.71328.731301678.79750-0.337403.863102.58120K562PUM1
ZNHIT1ENSG00000106400.72327.938101085.435701.1007022.4502020.92770K562PUS1
ZNHIT1ENSG00000106400.71653.305301057.535300.6445011.3047010.12550K562RBM15
ZNHIT1ENSG00000106400.7750.84610563.059700.415103.035102.14960K562RBM22
ZNHIT1ENSG00000106400.7531.88680820.80330-0.625903.562201.75860K562RPS3A
ZNHIT1ENSG00000106400.7487.97260356.869800.451302.139601.38840K562SF3B4
ZNHIT1ENSG00000106400.7741.76870575.835500.365202.577601.89170K562SRSF1
ZNHIT1ENSG00000106400.7701.90850543.907200.367802.346901.39340K562SRSF5
ZNHIT1ENSG00000106400.7288.42820397.53110-0.462903.072201.71080K562SSB
ZNHIT1ENSG00000106400.7850.78330582.718700.545904.657003.73170K562TARDBP
ZNHIT1ENSG00000106400.7812.56480562.114900.531505.224904.04950K562TIA1
ZNHIT1ENSG00000106400.7761.55940551.754300.464803.477702.22410K562TRA2A
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNHIT1 is not available on ENCORE database.





27 RBPs can affect the splicing of ZNHIT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNHIT1ENSG00000106400.7chr7+100861599100861766100861446100861498100865884100866055-0.267000.000000.00000excludedK562SRSF1
SEZNHIT1ENSG00000106400.7chr7+100861599100865077100861461100861498100865884100866055-0.344000.000450.08858excludedHepG2ILF3
SEZNHIT1ENSG00000106400.7chr7+1008615991008650771008614611008614981008658841008660550.378000.000680.07274includedK562FMR1
SEZNHIT1ENSG00000106400.7chr7+100865852100866055100860948100861498100866757100866837-0.062000.000000.00001excludedK562AQR
SEZNHIT1ENSG00000106400.7chr7+100861599100861766100861446100861498100865884100866055-0.144000.000660.02790excludedK562FXR1
SEZNHIT1ENSG00000106400.7chr7+100861599100861766100861446100861498100865884100866055-0.060000.000390.03555excludedHepG2DDX3X
SEZNHIT1ENSG00000106400.7chr7+1008615991008650771008614611008614981008658841008660550.226000.000010.00402includedHepG2TIA1
SEZNHIT1ENSG00000106400.7chr7+100861599100861766100861446100861498100865884100866055-0.294000.000710.05544excludedK562SUPV3L1
SEZNHIT1ENSG00000106400.7chr7+100861599100861766100861446100861498100865884100866055-0.063000.000310.02400excludedHepG2NCBP2
SEZNHIT1ENSG00000106400.7chr7+100861599100861766100861446100861498100865884100866055-0.057000.001800.06483excludedHepG2MATR3
SEZNHIT1ENSG00000106400.7chr7+100861599100865077100861461100861498100865884100866055-0.059000.000660.05560excludedHepG2DDX6
SEZNHIT1ENSG00000106400.7chr7+100861599100861766100861446100861498100865884100866055-0.387000.001010.06632excludedHepG2HNRNPL
SEZNHIT1ENSG00000106400.7chr7+100861599100865077100861461100861498100865884100866055-0.384000.000010.01011excludedHepG2XPO5
SEZNHIT1ENSG00000106400.7chr7+1008649131008650771008609481008614981008658841008660550.067000.002300.04897includedHepG2SRSF1
SEZNHIT1ENSG00000106400.7chr7+100861599100865077100861461100861498100865884100866055-0.366000.000410.03457excludedHepG2TIAL1
SEZNHIT1ENSG00000106400.7chr7+100864913100865077100861461100861498100865884100866055-0.081000.000510.05121excludedHepG2SUPV3L1
SEZNHIT1ENSG00000106400.7chr7+100864913100865077100861461100861498100865884100866055-0.085000.000050.03114excludedHepG2BCCIP
SEZNHIT1ENSG00000106400.7chr7+100861599100865077100861461100861498100865884100866055-0.409000.000100.03447excludedHepG2NOL12
SEZNHIT1ENSG00000106400.7chr7+100861599100861766100861446100861498100865884100866055-0.206000.000610.07410excludedK562RBM22
SEZNHIT1ENSG00000106400.7chr7+1008615991008650771008614611008614981008658841008660550.505000.000000.00000includedHepG2TAF15
SEZNHIT1ENSG00000106400.7chr7+100861599100861766100861446100861498100865884100866055-0.208000.000070.00462excludedK562TARDBP
SEZNHIT1ENSG00000106400.7chr7+100861599100861766100861446100861498100865884100866055-0.183000.000230.09866excludedHepG2SMNDC1
SEZNHIT1ENSG00000106400.7chr7+100861599100865077100861461100861498100865884100866055-0.137000.000060.02997excludedHepG2XRN2
SEZNHIT1ENSG00000106400.7chr7+100861599100861766100861446100861498100865884100866055-0.161000.003430.09983excludedK562PTBP1
A5SSZNHIT1ENSG00000106400.7chr7+1008615991008650771008615991008617661008658841008660550.275000.006900.09380longerK562AQR
MXEZNHIT1ENSG00000106400.7chr7+100865884100866055100866757100866837100860948100861498100866953100867123-0.194000.000000.000002includedHepG2TAF15
MXEZNHIT1ENSG00000106400.7chr7+1008658841008660551008667571008668371008609481008614981008669531008671230.077000.013260.098421includedHepG2SFPQ
MXEZNHIT1ENSG00000106400.7chr7+100865884100866055100866757100866837100860948100861498100866953100867123-0.097000.002760.073532includedHepG2PCBP1
MXEZNHIT1ENSG00000106400.7chr7+1008658841008660551008667571008668371008609481008614981008669531008671230.073000.000010.001151includedK562SBDS
MXEZNHIT1ENSG00000106400.7chr7+100865884100866055100866757100866837100861599100861766100866953100867054-0.060000.001300.024232includedK562SF3B4
MXEZNHIT1ENSG00000106400.7chr7+1008658841008660551008667571008668371008609481008614981008669531008671230.137000.001040.024011includedK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNHIT1 is not avaliable on ENCORE database.