ZNF83

General Information

Gene Name       : ZNF83
Gene ID             : ENSG00000167766.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF83)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF83ENSG00000167766.1832.7221.7827.25ENCSR000AEF
HepG2ZNF83ENSG00000167766.188.8415.9312.38ENCSR985KAT
K562ZNF83ENSG00000167766.1834.5436.4135.47ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF83 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF83 RNA is bound by 18 proteins.  







eCLIP assay for ZNF83 is not avaliable on ENCORE database.





18 proteins are bound to ZNF83 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr195312205453122205-3'-UTR,CDS,intron-Distal,intron-Proximal3.415857.63931K562EFTUD2
chr195311788153117940-3'-UTR,CDS,intron-Distal,intron-Proximal3.724047.69253K562RBM15
chr195312008353120105-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.715044.57180HepG2AQR
chr195311777253117852-3'-UTR,CDS,intron-Distal,intron-Proximal3.001323.01110HepG2HLTF
chr195312004753120108-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.7818245.82255K562AQR
chr195312006053120104-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.630367.80986K562PRPF8
chr195313831653138398-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.066948.56000K562UCHL5
chr195312209153122200-3'-UTR,CDS,intron-Distal,intron-Proximal4.728985.63000HepG2HLTF
chr195312001953120083-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.985996.24305HepG2AQR
chr195312006753120159-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.102145.20150K562GPKOW
chr195312213353122198-3'-UTR,CDS,intron-Distal,intron-Proximal3.6262014.53295K562PRPF8
chr195312005653120139-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.265366.11702K562SF3B4
chr195311609953116148-3'-UTR,intron-Distal3.986273.26547HepG2HLTF
chr195311573353115781-3'-UTR,intron-Distal4.210253.55983HepG2HLTF
chr195315878653158900-5'-UTR,intron-Distal,intron-Proximal4.334644.16554HepG2PPIG
chr195312024353120320-5'-UTR,intron-Distal4.216027.56829HepG2HNRNPK
chr195312025253120323-5'-UTR,intron-Distal4.053349.97887HepG2RBFOX2
chr195312113653121186-5'-UTR,intron-Distal3.453344.84851K562ILF3
chr195315865853158765-intron-Distal,intron-Proximal3.021245.01653K562KHSRP
chr195312344253123565-intron-Distal5.032356.55010K562HNRNPL
chr195316296353163077-intron-Distal3.318504.74253K562KHSRP
chr195312216453122189-intron-Distal,intron-Proximal6.44933400.00000K562AQR
chr195312215953122164-intron-Distal,intron-Proximal6.49427400.00000K562AQR
chr195314718253147333-intron-Distal3.166253.60809HepG2HNRNPK
chr195315213553152322-intron-Distal3.668194.72700HepG2GTF2F1
chr195315863353158723-intron-Distal,intron-Proximal3.127144.48980K562PRPF8
chr195314708253147202-intron-Distal3.135383.19579K562HNRNPK
chr195312345853123533-intron-Distal3.933163.50031HepG2HNRNPL
chr195319365653193677-intron-Distal4.623634.09264K562AQR
chr195318642453186513-intron-Distal4.248833.80954K562HNRNPL
chr195316461153164681-intron-Distal3.837183.06537K562RBFOX2
chr195314424253144322-intron-Distal3.962683.84437HepG2PRPF4
chr195316941353169544-intron-Distal5.333597.91717K562PTBP1
chr195312209053122159-intron-Distal,intron-Proximal6.2042571.86922K562AQR
chr195312346153123488-intron-Distal3.699663.24309K562AGGF1
chr195312207353122133-intron-Distal,intron-Proximal3.659678.91060K562PRPF8
chr195315215153152250-intron-Distal3.567429.41828K562GTF2F1
chr195315214853152232-intron-Distal3.012413.80339HepG2PRPF4
chr195312207453122131-intron-Distal,intron-Proximal3.945313.42844K562KHSRP
chr195319367753193694-intron-Distal4.560864.09264K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF83 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF83 is not available on ENCORE database.

  • 93 RBPs can affect the levels of ZNF83.  








The Knockdown/knockout RNA-Seq assay for ZNF83 is not available on ENCORE database.





93 RBPs can affect the gene expression of ZNF83 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF83ENSG00000167766.14756.18300588.822400.360802.405401.40190HepG2AATF
ZNF83ENSG00000167766.14468.05460639.67910-0.450702.716401.93840HepG2ASCC1
ZNF83ENSG00000167766.141348.680101001.604300.429105.725704.79910HepG2AUH
ZNF83ENSG00000167766.14634.64400465.165300.448102.690301.76920HepG2BCCIP
ZNF83ENSG00000167766.14994.83640812.875600.291302.090501.41240HepG2CALR
ZNF83ENSG00000167766.14434.07370607.73560-0.485503.072502.25990HepG2CIRBP
ZNF83ENSG00000167766.14975.45850636.002100.616906.170505.17560HepG2CPSF6
ZNF83ENSG00000167766.14746.69590975.49740-0.385603.952303.20920HepG2CELF1
ZNF83ENSG00000167766.14595.78760792.41580-0.411504.874203.80780HepG2DDX19B
ZNF83ENSG00000167766.14507.65250740.58660-0.544803.804903.08320HepG2DDX3X
ZNF83ENSG00000167766.141346.028501705.64670-0.341602.819301.51510HepG2DDX47
ZNF83ENSG00000167766.14619.71980457.329800.438302.586501.83470HepG2DDX55
ZNF83ENSG00000167766.14731.35670522.055800.486302.660101.69680HepG2DHX30
ZNF83ENSG00000167766.14763.45000541.255100.496103.673002.86920HepG2DNAJC21
ZNF83ENSG00000167766.14673.26340837.26830-0.314502.155901.41880HepG2EWSR1
ZNF83ENSG00000167766.14788.08850618.859100.348602.495601.40530HepG2FASTKD2
ZNF83ENSG00000167766.141012.93850637.053400.669002.495501.53410HepG2FTO
ZNF83ENSG00000167766.14914.40920471.038300.9569013.9691012.26270HepG2FUBP3
ZNF83ENSG00000167766.141092.17360632.571600.787808.208607.09320HepG2G3BP1
ZNF83ENSG00000167766.141070.82780671.500000.673206.712305.31190HepG2G3BP2
ZNF83ENSG00000167766.14315.57930502.16930-0.670205.008803.80260HepG2GEMIN5
ZNF83ENSG00000167766.14767.38480607.837000.336202.054201.44630HepG2HNRNPC
ZNF83ENSG00000167766.141004.85010672.086400.580208.761707.57570HepG2HNRNPF
ZNF83ENSG00000167766.14965.81450640.436300.592605.495704.53650HepG2HNRNPK
ZNF83ENSG00000167766.14894.19960603.816700.566404.025403.30510HepG2HNRNPU
ZNF83ENSG00000167766.14939.50970646.730100.538603.413402.28390HepG2KHSRP
ZNF83ENSG00000167766.14475.66950685.93250-0.528103.231802.55420HepG2MATR3
ZNF83ENSG00000167766.141002.07520701.627800.514102.717201.75820HepG2MTPAP
ZNF83ENSG00000167766.14899.26010584.286700.622006.778804.90690HepG2NAA15
ZNF83ENSG00000167766.14917.68650702.100800.386202.304501.72400HepG2NCBP2
ZNF83ENSG00000167766.14620.016601357.73280-1.130809.683807.98260HepG2PABPC1
ZNF83ENSG00000167766.141184.08920625.315900.9210011.5213010.07450HepG2PABPC4
ZNF83ENSG00000167766.14779.35830597.647400.382903.668102.70700HepG2PARN
ZNF83ENSG00000167766.14852.62500659.490500.370503.333302.49110HepG2PRPF4
ZNF83ENSG00000167766.14722.596301053.94430-0.544509.387508.43190HepG2PUM1
ZNF83ENSG00000167766.14544.30660872.68420-0.6810011.3921010.28750HepG2PUS1
ZNF83ENSG00000167766.141305.50110700.738400.8976017.7001016.31390HepG2QKI
ZNF83ENSG00000167766.14953.17060635.994600.583605.080204.19300HepG2RBM25
ZNF83ENSG00000167766.14931.40880670.749400.473503.625602.93250HepG2RECQL
ZNF83ENSG00000167766.141191.20790724.011800.718207.397306.36050HepG2RPLP0
ZNF83ENSG00000167766.14998.75200718.836900.474402.431401.54550HepG2RPS10
ZNF83ENSG00000167766.141036.487901404.25150-0.438102.791001.47620HepG2SART3
ZNF83ENSG00000167766.14694.07690982.69940-0.501702.871602.18440HepG2SF3A3
ZNF83ENSG00000167766.14856.21910673.640500.345902.952902.34610HepG2SF3B4
ZNF83ENSG00000167766.141607.009501085.632000.5657011.3998010.57040HepG2SRFBP1
ZNF83ENSG00000167766.14506.14250703.16150-0.474304.591004.02020HepG2SRSF1
ZNF83ENSG00000167766.14791.13410980.28910-0.309302.869802.23230HepG2SRSF5
ZNF83ENSG00000167766.14889.19510660.305000.429304.811503.93330HepG2SRSF7
ZNF83ENSG00000167766.14900.64900572.082400.6546011.0265010.05390HepG2SRSF9
ZNF83ENSG00000167766.141159.65550942.530100.299003.092602.55690HepG2SSB
ZNF83ENSG00000167766.14686.169301114.84540-0.7002013.5629012.35720HepG2SUCLG1
ZNF83ENSG00000167766.14897.70730632.103100.506005.817305.05600HepG2TAF15
ZNF83ENSG00000167766.141084.15830670.517300.693107.916506.77270HepG2TARDBP
ZNF83ENSG00000167766.141169.26780580.738001.0095012.9202011.14660HepG2TIA1
ZNF83ENSG00000167766.14485.51340268.987600.851907.834206.55970HepG2UCHL5
ZNF83ENSG00000167766.14682.79410871.50330-0.352103.627202.84340HepG2UPF1
ZNF83ENSG00000167766.14420.76440841.40340-0.9998019.1844017.82660HepG2UTP3
ZNF83ENSG00000167766.14585.40380448.194700.385202.329101.65960HepG2XRN2
ZNF83ENSG00000167766.141003.51300650.873300.6245010.493109.32540HepG2ZC3H8
ZNF83ENSG00000167766.141096.99770958.488000.194601.787801.32250HepG2ZNF622
ZNF83ENSG00000167766.141944.748502196.71660-0.175801.829301.34850K562AGGF1
ZNF83ENSG00000167766.141969.525902413.72710-0.293402.556101.61720K562AKAP8
ZNF83ENSG00000167766.141782.875702274.87020-0.351602.966002.36160K562AQR
ZNF83ENSG00000167766.141947.928102527.55770-0.375806.416505.48170K562DDX47
ZNF83ENSG00000167766.141867.716502459.83560-0.397306.388804.97390K562DKC1
ZNF83ENSG00000167766.14796.897701116.31720-0.486304.077702.95240K562EFTUD2
ZNF83ENSG00000167766.14939.894501245.07370-0.405704.298803.31780K562EIF3G
ZNF83ENSG00000167766.141351.615701687.17860-0.319902.083201.34360K562FIP1L1
ZNF83ENSG00000167766.141448.069801076.481000.427702.796301.66420K562FKBP4
ZNF83ENSG00000167766.14822.732901308.49540-0.6694011.9192010.75410K562FXR1
ZNF83ENSG00000167766.141953.481101442.989300.436902.832002.11410K562G3BP2
ZNF83ENSG00000167766.142029.823801606.640000.337204.027202.94080K562HNRNPU
ZNF83ENSG00000167766.141333.941001614.64940-0.275502.178601.42790K562MAGOH
ZNF83ENSG00000167766.141916.768402322.05890-0.276702.385301.41210K562MAK16
ZNF83ENSG00000167766.141244.166001611.41700-0.373203.712902.63190K562MATR3
ZNF83ENSG00000167766.142029.696802717.56760-0.421105.240103.90380K562MBNL1
ZNF83ENSG00000167766.142256.398901707.979500.401607.240505.98460K562MTPAP
ZNF83ENSG00000167766.141241.367601578.18120-0.346303.400101.89900K562PCBP1
ZNF83ENSG00000167766.141098.734701436.69000-0.386903.421402.33520K562PCBP2
ZNF83ENSG00000167766.142010.527101502.515000.420103.365102.44860K562PCBP3
ZNF83ENSG00000167766.141473.427801152.501700.354303.494102.58750K562POLR2G
ZNF83ENSG00000167766.141544.118101915.25270-0.310802.392901.63230K562PPIG
ZNF83ENSG00000167766.14502.414601086.30650-1.1125016.7578014.88800K562PRPF8
ZNF83ENSG00000167766.141460.488101111.941600.393303.779002.69830K562PSIP1
ZNF83ENSG00000167766.141008.434901568.71180-0.637509.679208.49180K562PTBP1
ZNF83ENSG00000167766.141777.331702208.72550-0.313503.737403.06340K562RBM15
ZNF83ENSG00000167766.14971.088101504.36240-0.631507.895806.38240K562RBM22
ZNF83ENSG00000167766.14815.843801106.48900-0.439602.996802.14620K562RPS19
ZNF83ENSG00000167766.141215.200301705.84310-0.489304.362003.06750K562RPS3
ZNF83ENSG00000167766.14789.247601026.83960-0.379703.066701.92660K562SAFB
ZNF83ENSG00000167766.142266.711901872.560900.275503.266602.38320K562SF3A3
ZNF83ENSG00000167766.141072.55490819.734200.387702.981301.66470K562SLBP
ZNF83ENSG00000167766.14929.168401537.82870-0.7269011.4956010.06600K562SRSF1
ZNF83ENSG00000167766.141231.178001646.99010-0.419804.320802.95770K562SRSF4
ZNF83ENSG00000167766.142799.854602213.714600.338802.873301.48540K562SSRP1
ZNF83ENSG00000167766.142606.212502024.747200.364102.833001.56580K562STAU1
ZNF83ENSG00000167766.14918.793801155.95960-0.331302.866602.03130K562SYNCRIP
ZNF83ENSG00000167766.141141.913101501.35540-0.394804.085203.06330K562TIA1
ZNF83ENSG00000167766.141169.714901473.11350-0.332702.547101.50720K562TRA2A
ZNF83ENSG00000167766.142447.235402012.197200.282304.171003.30660K562UPF1
ZNF83ENSG00000167766.142225.509201721.774400.370103.995102.93800K562WDR3
ZNF83ENSG00000167766.142047.898701790.440200.193702.223101.45760K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF83 is not available on ENCORE database.





4 RBPs can affect the splicing of ZNF83 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF83ENSG00000167766.14chr19-531199705312009453117924531180505312218853122315-0.332000.000200.01038excludedK562PRPF8
SEZNF83ENSG00000167766.14chr19-5311997053120094531179245311805053122188531223150.452000.000180.05447includedHepG2BCLAF1
SEZNF83ENSG00000167766.14chr19-5317743453177506531640145316409653193695531937390.107000.006000.09294includedK562U2AF1
SEZNF83ENSG00000167766.14chr19-531588135315894053138318531384065316401453164096-0.127000.002370.08524excludedK562HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF83 is not avaliable on ENCORE database.