ZNF618

General Information

Gene Name       : ZNF618
Gene ID             : ENSG00000157657.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF618)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF618ENSG00000157657.140.000.010.01ENCSR000AEF
HepG2ZNF618ENSG00000157657.140.130.120.12ENCSR985KAT
K562ZNF618ENSG00000157657.146.336.166.25ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF618 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF618 RNA is bound by 7 proteins.  







eCLIP assay for ZNF618 is not avaliable on ENCORE database.





7 proteins are bound to ZNF618 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9116815666116815765+3'-UTR4.175183.69113K562LIN28B
chr9116812772116812831+3'-UTR3.252893.37083K562UPF1
chr9116750773116750841+CDS3.372623.02345K562ZNF622
chr9116812272116812342+CDS4.666533.70177K562PUM2
chr9116655171116655250+intron-Distal3.927823.66668K562KHSRP
chr9116797850116797940+intron-Distal5.054055.39854K562PTBP1
chr9116652019116652131+intron-Distal4.524603.42734K562PTBP1
chr9116671595116671688+intron-Distal3.679973.06347K562NONO
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF618 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF618 is not available on ENCORE database.

  • 76 RBPs can affect the levels of ZNF618.  








The Knockdown/knockout RNA-Seq assay for ZNF618 is not available on ENCORE database.





76 RBPs can affect the gene expression of ZNF618 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF618ENSG00000157657.1011.7790034.02840-1.530502.454701.51450HepG2ADAR
ZNF618ENSG00000157657.1039.3096012.797301.618902.392401.89390HepG2AKAP1
ZNF618ENSG00000157657.1019.8749081.39630-2.034007.709706.65680HepG2AUH
ZNF618ENSG00000157657.107.50780110.23920-3.8761015.1386013.89400HepG2BOP1
ZNF618ENSG00000157657.1029.3253074.00510-1.335503.427502.33150HepG2CCAR1
ZNF618ENSG00000157657.10113.287508.714903.7003016.6563014.84050HepG2CNOT7
ZNF618ENSG00000157657.10203.77270101.211401.009505.541604.59990HepG2CPSF6
ZNF618ENSG00000157657.1011.6607034.89850-1.581502.699001.69530HepG2YBX3
ZNF618ENSG00000157657.1012.6180039.02370-1.628902.891302.23700HepG2CELF1
ZNF618ENSG00000157657.1024.43400114.93110-2.233808.798607.11540HepG2DDX59
ZNF618ENSG00000157657.106.3460034.26020-2.432604.486203.60750HepG2DNAJC21
ZNF618ENSG00000157657.1068.4557031.224001.132402.343001.49240HepG2EEF2
ZNF618ENSG00000157657.1052.6041010.892202.271804.787003.89760HepG2EIF4B
ZNF618ENSG00000157657.1011.6396041.39470-1.830403.583002.65080HepG2EIF4G1
ZNF618ENSG00000157657.1010.0761039.65160-1.976403.590302.67080HepG2EIF4G2
ZNF618ENSG00000157657.1010.8189033.57950-1.634002.528101.31310HepG2FKBP4
ZNF618ENSG00000157657.1031.40530101.37280-1.690604.195202.94710HepG2FTO
ZNF618ENSG00000157657.1039.4970011.282501.807603.157102.41860HepG2FXR1
ZNF618ENSG00000157657.1010.31580114.74690-3.4755014.4853013.13280HepG2GPKOW
ZNF618ENSG00000157657.1023.9322084.45580-1.819207.189706.10490HepG2HNRNPF
ZNF618ENSG00000157657.1012.4501038.20780-1.617702.909302.22060HepG2HNRNPL
ZNF618ENSG00000157657.1015.69020109.50360-2.8030011.4723010.30090HepG2HNRNPLL
ZNF618ENSG00000157657.1024.2882083.16510-1.775706.616705.53960HepG2IGF2BP1
ZNF618ENSG00000157657.1075.249309.982802.914106.781605.28260HepG2IGF2BP3
ZNF618ENSG00000157657.1042.30120111.64480-1.400104.140502.94250HepG2MTPAP
ZNF618ENSG00000157657.1043.7134011.621001.911203.675002.94870HepG2NCBP2
ZNF618ENSG00000157657.1010.7533041.59620-1.951703.971603.05810HepG2NOL12
ZNF618ENSG00000157657.1098.0285037.046201.403803.771702.47870HepG2NONO
ZNF618ENSG00000157657.105.4886097.08440-4.1447015.6201014.00250HepG2NSUN2
ZNF618ENSG00000157657.1048.5543011.285902.105005.216604.51410HepG2PTBP1
ZNF618ENSG00000157657.109.5448052.55050-2.460906.787505.52160HepG2RBM15
ZNF618ENSG00000157657.1073.5327034.548801.089602.345401.44030HepG2RBM27
ZNF618ENSG00000157657.1098.1408033.012601.571703.225501.46190HepG2RBM39
ZNF618ENSG00000157657.1040.6407012.561001.693902.898402.34710HepG2NELFE
ZNF618ENSG00000157657.1030.7268090.97640-1.566005.621904.69920HepG2RPLP0
ZNF618ENSG00000157657.10147.2432024.663802.5776016.2138014.89920HepG2RPS19
ZNF618ENSG00000157657.10105.0796031.860901.721506.348605.16690HepG2RPS2
ZNF618ENSG00000157657.1038.131308.730302.126803.846802.90230HepG2RPS3A
ZNF618ENSG00000157657.108.5162034.03650-1.998803.545202.83200HepG2SAFB2
ZNF618ENSG00000157657.1060.0932024.756501.279302.891801.93000HepG2SERBP1
ZNF618ENSG00000157657.1098.6937036.300601.442902.858701.47990HepG2SF1
ZNF618ENSG00000157657.1052.67120108.39610-1.041203.336502.56900HepG2SF3B1
ZNF618ENSG00000157657.1056.3335011.752002.261005.802804.99980HepG2SF3B4
ZNF618ENSG00000157657.1091.7697039.688701.209204.382203.60550HepG2SMN1
ZNF618ENSG00000157657.107.74150120.60640-3.9615016.3131014.44060HepG2SNRNP70
ZNF618ENSG00000157657.1031.2197088.22350-1.498705.364304.72980HepG2SRFBP1
ZNF618ENSG00000157657.1056.8269012.265702.211805.506804.89690HepG2SRSF1
ZNF618ENSG00000157657.1031.4966082.97430-1.397504.822103.94270HepG2SRSF7
ZNF618ENSG00000157657.1016.5093076.59700-2.214008.429907.62960HepG2SSB
ZNF618ENSG00000157657.103.1448024.66460-2.971402.997001.74090HepG2SUB1
ZNF618ENSG00000157657.105.3114040.16080-2.918605.433304.53580HepG2SUPV3L1
ZNF618ENSG00000157657.1051.9650014.185401.873003.631702.41590HepG2TBRG4
ZNF618ENSG00000157657.1017.3425037.47300-1.111501.896401.41200HepG2TRIM56
ZNF618ENSG00000157657.1013.2106041.07540-1.636602.194701.45410HepG2UBE2L3
ZNF618ENSG00000157657.103.9572023.72410-2.583803.412402.57400HepG2UCHL5
ZNF618ENSG00000157657.109.5654031.03260-1.697902.369601.80590HepG2UTP3
ZNF618ENSG00000157657.1075.2350029.031201.373703.980102.70960HepG2XRCC6
ZNF618ENSG00000157657.109.2075035.35100-1.940903.740903.13020HepG2ZNF622
ZNF618ENSG00000157657.101301.610601122.258200.213802.003901.50600K562AGGF1
ZNF618ENSG00000157657.101253.759301000.507300.325403.223901.90980K562DDX21
ZNF618ENSG00000157657.10947.355301336.30850-0.496307.947006.92000K562DDX47
ZNF618ENSG00000157657.10619.73200833.22600-0.427104.351803.47740K562EIF2S2
ZNF618ENSG00000157657.10702.23940936.77430-0.415703.278602.35200K562FIP1L1
ZNF618ENSG00000157657.10630.41320833.76370-0.403303.754703.06610K562FXR1
ZNF618ENSG00000157657.10501.85040643.10490-0.357802.178201.64030K562HNRNPC
ZNF618ENSG00000157657.10432.06220770.48280-0.834507.903206.20430K562HNRNPM
ZNF618ENSG00000157657.10859.588901270.10550-0.563205.885704.73920K562HSPD1
ZNF618ENSG00000157657.10955.31890689.608000.470104.230402.68730K562IGF2BP3
ZNF618ENSG00000157657.10651.17590476.470500.450603.006901.46070K562KHDRBS1
ZNF618ENSG00000157657.10934.17580689.202300.438702.463201.58730K562KRR1
ZNF618ENSG00000157657.101218.651401007.964000.273702.780001.96830K562MTPAP
ZNF618ENSG00000157657.101324.551401119.936200.242002.920002.15690K562NSUN2
ZNF618ENSG00000157657.10970.38200696.494500.478304.874703.03540K562PCBP1
ZNF618ENSG00000157657.10802.212701063.38460-0.406603.150102.26660K562PPIG
ZNF618ENSG00000157657.10378.02230588.03720-0.637404.905603.90960K562PRPF8
ZNF618ENSG00000157657.10422.61360692.21560-0.711908.259707.15320K562PTBP1
ZNF618ENSG00000157657.10824.180001158.03310-0.490604.146503.50140K562PUS1
ZNF618ENSG00000157657.10444.37460598.89720-0.430502.426501.66300K562RPS19
ZNF618ENSG00000157657.10699.17210519.764500.427702.995501.67660K562SLBP
ZNF618ENSG00000157657.10747.07590926.61360-0.310702.337801.58270K562SYNCRIP
ZNF618ENSG00000157657.10881.91180662.478400.412703.443302.51550K562TIA1
ZNF618ENSG00000157657.10770.11660589.093600.386502.625201.70980K562TRIM56
ZNF618ENSG00000157657.10845.990601056.62740-0.320803.638802.67700K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF618 is not available on ENCORE database.





7 RBPs can affect the splicing of ZNF618 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF618ENSG00000157657.10chr9+116778392116778452116770756116770834116778974116779064-0.239000.000170.02594excludedK562FMR1
SEZNF618ENSG00000157657.10chr9+116778392116778452116770756116770834116778974116779064-0.312000.004990.06214excludedK562PUS1
SEZNF618ENSG00000157657.10chr9+116778392116778452116770756116770834116778974116779064-0.241000.000580.08989excludedK562GPKOW
SEZNF618ENSG00000157657.10chr9+116778392116778452116770756116770834116778974116779064-0.553000.000050.00149excludedK562U2AF2
SEZNF618ENSG00000157657.10chr9+116797470116797515116794924116795008116798579116798657-0.313000.000750.03050excludedK562HNRNPU
SEZNF618ENSG00000157657.10chr9+116778392116778452116770756116770834116778974116779064-0.262000.000190.02803excludedK562CPSF6
SEZNF618ENSG00000157657.10chr9+1167783921167784521167707561167708341167789741167790640.338000.000070.02495includedK562SAFB

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF618 is not avaliable on ENCORE database.