ZNF12

General Information

Gene Name       : ZNF12
Gene ID             : ENSG00000164631.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF12)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF12ENSG00000164631.1811.4512.1311.79ENCSR000AEF
HepG2ZNF12ENSG00000164631.1810.9714.9312.95ENCSR985KAT
K562ZNF12ENSG00000164631.1810.609.309.95ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF12 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF12 RNA is bound by 31 proteins.  







eCLIP assay for ZNF12 is not avaliable on ENCORE database.





31 proteins are bound to ZNF12 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr767281406728253-3'-UTR,intron-Distal3.2955512.43148K562PUM2
chr767289316728975-3'-UTR,intron-Distal3.780863.15006K562RBM15
chr767301876730246-3'-UTR,intron-Distal4.1147813.62242K562PUM2
chr767299796730042-3'-UTR,intron-Distal,intron-Proximal4.2887415.35570K562PUM2
chr767300426730113-3'-UTR,intron-Distal,intron-Proximal4.008969.48331K562PUM2
chr767464046746439-5'-UTR,intron-Distal3.750023.82503HepG2DDX3X
chr767405276740605-5'-UTR,intron-Distal,intron-Proximal4.023983.69425K562TARDBP
chr767461256746204-5'-UTR,intron-Distal,intron-Proximal3.908064.41267HepG2PPIG
chr767373266737422-5'-UTR,CDS,intron-Distal3.042163.73413HepG2PPIG
chr767464136746524-5'-UTR,intron-Distal,intron-Proximal3.733065.29681HepG2NCBP2
chr767462616746325-5'-UTR,intron-Distal,intron-Proximal3.178457.70473HepG2DDX3X
chr767461816746228-5'-UTR,intron-Distal,intron-Proximal3.744766.48236HepG2DDX3X
chr767464546746531-5'-UTR,intron-Distal,intron-Proximal3.959783.19863HepG2EIF3D
chr767310406731088-CDS,intron-Distal3.333076.28688K562UCHL5
chr767305846730644-CDS,intron-Distal3.913366.12308K562PUM2
chr767318016731872-CDS,intron-Distal3.442314.25142K562BUD13
chr767316416731693-CDS,intron-Distal3.177584.62770HepG2HLTF
chr767311006731161-CDS,intron-Distal3.476067.58911K562UCHL5
chr767321566732220-CDS,intron-Distal,intron-Proximal4.531208.80935HepG2BCLAF1
chr767310826731151-CDS,intron-Distal3.144953.40321HepG2GRWD1
chr767316316731709-CDS,intron-Distal3.076283.17744HepG2GRWD1
chr767370256737063-CDS,intron-Distal3.008143.55800HepG2BCLAF1
chr767310856731161-CDS,intron-Distal3.848843.22245K562GRWD1
chr767369746737063-CDS,intron-Distal,intron-Proximal4.512855.11007HepG2GRWD1
chr767369346736991-CDS,intron-Distal,intron-Proximal5.153908.04585HepG2PRPF8
chr767316766731718-CDS,intron-Distal3.205744.35477K562UCHL5
chr767369626737049-CDS,intron-Distal,intron-Proximal4.064764.07830K562SRSF1
chr767316426731694-CDS,intron-Distal4.981345.97506K562NIPBL
chr767460016746062-intron-Distal3.531115.34337K562AQR
chr767417756741888-intron-Distal3.811424.25556HepG2TIAL1
chr767420456742141-intron-Distal5.4160610.07719K562IGF2BP1
chr767353786735591-intron-Distal3.127124.97441HepG2MATR3
chr767420736742135-intron-Distal5.8191912.64183K562TARDBP
chr767412236741274-intron-Distal5.2236312.41769K562EIF4G2
chr767359106735973-intron-Distal4.289863.42734K562PTBP1
chr767418196741991-intron-Distal6.9989380.16996K562EIF4G2
chr767364976736581-intron-Distal4.993155.01910HepG2MATR3
chr767417536741981-intron-Distal5.4064714.06508K562FUS
chr767358836735950-intron-Distal6.6324980.81919HepG2QKI
chr767418786741956-intron-Distal6.0914717.00651K562TARDBP
chr767359076735960-intron-Distal4.427414.86548HepG2SUGP2
chr767420016742051-intron-Distal4.494439.32999HepG2DKC1
chr767420536742140-intron-Distal4.783984.03918HepG2SRSF7
chr767420886742137-intron-Distal4.877755.34409K562AATF
chr767429196742960-intron-Distal3.159433.83345K562EIF4G2
chr767387206738917-intron-Distal4.5312612.12727HepG2HNRNPL
chr767420776742140-intron-Distal6.5670635.06575K562EIF4G2
chr767419016742014-intron-Distal4.351867.56606K562CSTF2T
chr767419006742045-intron-Distal5.7148211.90544K562IGF2BP1
chr767426016742661-intron-Distal5.733219.02011K562EIF4G2
chr767418886741987-intron-Distal4.064573.78849HepG2TIAL1
chr767364556736539-intron-Distal4.0991511.46951HepG2SUGP2
chr767419036742001-intron-Distal5.4726815.24942HepG2DKC1
chr767361036736149-intron-Distal4.562505.58061HepG2SUGP2
chr767412166741285-intron-Distal3.113845.34585K562CSTF2T
chr767420786742135-intron-Distal4.728255.81141K562CSTF2T
chr767362926736346-intron-Distal3.646475.06177HepG2SUGP2
chr767357966735847-intron-Distal4.088733.86809HepG2SUGP2
chr767413836741422-intron-Distal3.236766.81502K562EIF4G2
chr767418286741959-intron-Distal4.785246.90606K562EWSR1
chr767365566736598-intron-Distal3.399124.33009HepG2SUGP2
chr767420136742135-intron-Distal4.039173.60521K562FUS
chr767426286742673-intron-Distal4.033893.87294K562TARDBP
chr767418836741982-intron-Distal4.155043.30696K562EXOSC5
chr767359756735999-intron-Distal4.4285410.94082HepG2QKI
chr767359056736004-intron-Distal8.3307369.20196K562QKI
chr767417716741903-intron-Distal4.6279818.68971HepG2DKC1
chr767359506735973-intron-Distal5.8617328.59258HepG2QKI
chr767417596741901-intron-Distal5.0250916.64760K562CSTF2T
chr767387056738869-intron-Distal3.491543.84589K562HNRNPL
chr767420876742141-intron-Distal6.0259421.72558HepG2DKC1
chr767420336742077-intron-Distal5.9100317.75857K562EIF4G2
chr767420426742139-intron-Distal4.634066.60946HepG2IGF2BP1
chr767419566742073-intron-Distal6.4563122.45479K562TARDBP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF12 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF12 is not available on ENCORE database.

  • 74 RBPs can affect the levels of ZNF12.  








The Knockdown/knockout RNA-Seq assay for ZNF12 is not available on ENCORE database.





74 RBPs can affect the gene expression of ZNF12 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF12ENSG00000164631.14917.672901110.40480-0.275002.881202.26290HepG2ACO1
ZNF12ENSG00000164631.14808.822801404.07450-0.795708.006307.15270HepG2AKAP1
ZNF12ENSG00000164631.14799.675901161.75280-0.538804.560103.56420HepG2ASCC1
ZNF12ENSG00000164631.14906.099601110.26180-0.293203.371102.64960HepG2CKAP4
ZNF12ENSG00000164631.14822.210801027.01060-0.320903.763102.80900HepG2DDX19B
ZNF12ENSG00000164631.14981.64670776.135200.338802.547501.67410HepG2DDX24
ZNF12ENSG00000164631.14982.457201344.99510-0.453103.464902.77430HepG2DDX3X
ZNF12ENSG00000164631.14840.242001062.38190-0.338403.537102.78630HepG2DKC1
ZNF12ENSG00000164631.14513.80080782.10080-0.606107.531106.41730HepG2DNAJC21
ZNF12ENSG00000164631.14634.87160775.10210-0.287902.706802.06070HepG2DNAJC2
ZNF12ENSG00000164631.14556.44990806.91620-0.536202.628701.72750HepG2EEF2
ZNF12ENSG00000164631.14543.51950745.38270-0.455603.969702.57330HepG2EIF2S2
ZNF12ENSG00000164631.14972.816101227.44440-0.335401.830401.30610HepG2EIF4A3
ZNF12ENSG00000164631.14775.281001195.09380-0.624304.304903.45950HepG2EIF4B
ZNF12ENSG00000164631.141974.534801648.190300.260503.308902.66030HepG2ETF1
ZNF12ENSG00000164631.14698.37620947.63830-0.440302.332301.30320HepG2FUS
ZNF12ENSG00000164631.14938.486201238.44700-0.400102.790802.09570HepG2FXR1
ZNF12ENSG00000164631.14417.51470583.30540-0.482402.458501.61910HepG2GEMIN5
ZNF12ENSG00000164631.14863.972201060.17840-0.295303.001901.98750HepG2HDGF
ZNF12ENSG00000164631.14601.20180872.44080-0.537207.481806.52330HepG2HNRNPU
ZNF12ENSG00000164631.14799.617201128.06740-0.496502.964801.68780HepG2HSPD1
ZNF12ENSG00000164631.14908.228101167.76690-0.362602.416001.78020HepG2IGF2BP2
ZNF12ENSG00000164631.14697.97670891.17460-0.352504.345003.44650HepG2ILF2
ZNF12ENSG00000164631.14925.950501279.76470-0.466903.078201.80550HepG2KHDRBS1
ZNF12ENSG00000164631.14858.871201015.11040-0.241102.359001.41750HepG2KIF1C
ZNF12ENSG00000164631.14945.296001245.81210-0.398202.509901.90630HepG2MATR3
ZNF12ENSG00000164631.14680.61540530.747500.358702.004001.36270HepG2NSUN2
ZNF12ENSG00000164631.14294.23830489.83170-0.735303.869701.97220HepG2PA2G4
ZNF12ENSG00000164631.14601.851701227.77760-1.028608.037506.47720HepG2PABPC1
ZNF12ENSG00000164631.14952.874701135.39000-0.252802.225401.67000HepG2PCBP1
ZNF12ENSG00000164631.14931.059801155.35000-0.311403.105702.53230HepG2PTBP1
ZNF12ENSG00000164631.14919.171601291.32480-0.490405.293904.50230HepG2PUF60
ZNF12ENSG00000164631.141138.230501370.75980-0.268203.607302.94810HepG2PUM1
ZNF12ENSG00000164631.14916.086801131.03370-0.304103.435402.76670HepG2PUS1
ZNF12ENSG00000164631.14952.087101285.75360-0.433405.553804.82970HepG2NELFE
ZNF12ENSG00000164631.14488.04500637.38130-0.385101.851201.33870HepG2RPS19
ZNF12ENSG00000164631.141038.097601348.68420-0.377602.025501.34150HepG2RPS3A
ZNF12ENSG00000164631.14779.03120592.452200.394902.588301.90450HepG2SF3B1
ZNF12ENSG00000164631.14599.47620906.10320-0.596008.671107.63340HepG2SMN1
ZNF12ENSG00000164631.14849.329701255.47930-0.563809.246608.49500HepG2SRSF1
ZNF12ENSG00000164631.14957.189501274.94900-0.413605.775004.91870HepG2SRSF5
ZNF12ENSG00000164631.14980.783701450.00780-0.5641011.6706010.54310HepG2SUCLG1
ZNF12ENSG00000164631.14703.65460847.85440-0.268901.905101.47270HepG2TIAL1
ZNF12ENSG00000164631.14587.76640855.31000-0.541207.472106.62230HepG2TRIM56
ZNF12ENSG00000164631.14426.00650893.34490-1.068303.342102.25560HepG2U2AF2
ZNF12ENSG00000164631.141393.007101677.68750-0.268302.899302.31940K562AGGF1
ZNF12ENSG00000164631.141433.831601745.71960-0.283902.050301.48540K562AKAP8L
ZNF12ENSG00000164631.141559.584902191.60020-0.490805.992004.05770K562APOBEC3C
ZNF12ENSG00000164631.143645.955001967.614000.8897013.9999012.82400K562AQR
ZNF12ENSG00000164631.141200.95000987.297600.282502.170201.46710K562CPSF6
ZNF12ENSG00000164631.143975.505203054.249900.380204.995503.67790K562CELF1
ZNF12ENSG00000164631.14946.295601195.19700-0.336903.521302.72460K562EIF2S2
ZNF12ENSG00000164631.14847.746301034.30970-0.287002.411001.66600K562EIF3G
ZNF12ENSG00000164631.141409.072501106.536200.348603.067201.37690K562FASTKD2
ZNF12ENSG00000164631.141009.87980736.676700.455003.321102.06610K562FKBP4
ZNF12ENSG00000164631.141199.79550914.399400.391803.650402.07710K562FUS
ZNF12ENSG00000164631.14767.714701261.53750-0.7165013.1034011.88450K562FXR1
ZNF12ENSG00000164631.142026.989301332.034100.605604.910303.90590K562G3BP2
ZNF12ENSG00000164631.141198.730101592.72140-0.410004.206603.27770K562GRSF1
ZNF12ENSG00000164631.141654.432201294.361800.354003.434102.23360K562HNRNPA1
ZNF12ENSG00000164631.14566.04150838.44900-0.566803.220602.21140K562HNRNPM
ZNF12ENSG00000164631.141029.516301381.75760-0.424502.446501.69490K562HSPD1
ZNF12ENSG00000164631.141131.449501584.67140-0.486003.369002.43550K562MAGOH
ZNF12ENSG00000164631.141658.777101253.827100.403708.062906.88480K562NSUN2
ZNF12ENSG00000164631.14739.554001539.54260-1.0578010.202108.98260K562PTBP1
ZNF12ENSG00000164631.142108.754502709.95450-0.361903.441902.53400K562PUF60
ZNF12ENSG00000164631.141336.884101686.85640-0.335503.533902.87720K562RBM15
ZNF12ENSG00000164631.141038.534801476.71160-0.507803.163702.25910K562RBM22
ZNF12ENSG00000164631.14723.47900950.31920-0.393502.383001.62690K562RPS19
ZNF12ENSG00000164631.14883.984301203.08420-0.444603.260302.16460K562RPS3
ZNF12ENSG00000164631.14476.91240732.40230-0.618905.875804.30040K562SAFB
ZNF12ENSG00000164631.141793.182201237.292700.535204.561803.53760K562SF3A3
ZNF12ENSG00000164631.14617.62860454.539700.442202.873101.58770K562SLBP
ZNF12ENSG00000164631.14852.676001509.16760-0.823707.163506.03430K562SRSF1
ZNF12ENSG00000164631.14938.411301161.40640-0.307602.272501.33580K562SRSF4
ZNF12ENSG00000164631.141620.506201222.936500.406003.298001.90380K562STAU1
ZNF12ENSG00000164631.14627.13290824.52790-0.394803.334102.43320K562SYNCRIP
ZNF12ENSG00000164631.141102.150001473.47410-0.418902.387601.63470K562TIA1
ZNF12ENSG00000164631.141264.854501765.53050-0.481103.761701.56430K562TUFM
ZNF12ENSG00000164631.141643.777401329.464000.306104.145103.28340K562UPF1
ZNF12ENSG00000164631.141852.783901137.573000.7036011.799609.94180K562WDR3
ZNF12ENSG00000164631.141458.967401182.994800.302404.073403.06100K562WDR43
ZNF12ENSG00000164631.143529.985702216.205300.6715011.479509.57710K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF12 is not available on ENCORE database.





3 RBPs can affect the splicing of ZNF12 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF12ENSG00000164631.14chr7-6733287673334067280636732334673696967370650.084000.000050.00606includedHepG2RBM22
SEZNF12ENSG00000164631.14chr7-674478967448546737315673744267460626746554-0.074000.009230.09893excludedK562PUS1
A3SSZNF12ENSG00000164631.14chr7-6732232673237367322326732334673696967371200.064000.000120.00105longerK562AQR
A3SSZNF12ENSG00000164631.14chr7-6736969673712067369696737065673731567374420.149000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF12 is not avaliable on ENCORE database.