XXYLT1

General Information

Gene Name       : XXYLT1
Gene ID             : ENSG00000173950.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: XXYLT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878XXYLT1ENSG00000173950.155.316.105.71ENCSR000AEF
HepG2XXYLT1ENSG00000173950.1516.2414.7615.50ENCSR985KAT
K562XXYLT1ENSG00000173950.1510.3510.4910.42ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for XXYLT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • XXYLT1 RNA is bound by 31 proteins.  







eCLIP assay for XXYLT1 is not avaliable on ENCORE database.





31 proteins are bound to XXYLT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3194789395194789479-3'-UTR,intron-Distal3.754643.48322HepG2UPF1
chr3194789983194790059-3'-UTR,intron-Distal4.249264.49605HepG2UPF1
chr3194789625194789779-3'-UTR,intron-Distal5.3819410.75082HepG2UPF1
chr3194789616194789689-3'-UTR,intron-Distal4.239893.69433K562UPF1
chr3194991783194991845-5'-UTR,CDS,intron-Distal5.5185037.30590HepG2DDX3X
chr3194991808194991888-5'-UTR,intron-Distal3.216853.64037HepG2NCBP2
chr3194991845194991886-5'-UTR,intron-Distal5.8952419.15345HepG2DDX3X
chr3194991726194991780-CDS,intron-Distal5.5404523.17024HepG2DDX3X
chr3194991577194991617-CDS,intron-Distal,intron-Proximal4.729237.46114HepG2DDX3X
chr3194991687194991718-CDS,intron-Distal,intron-Proximal5.229237.46114HepG2DDX3X
chr3194977895194977965-intron-Distal4.147963.71028HepG2NKRF
chr3194833062194833111-intron-Distal5.187546.43973HepG2AGGF1
chr3194831827194831864-intron-Distal5.391516.88699HepG2XPO5
chr3194833531194833590-intron-Distal5.671145.91895HepG2AGGF1
chr3194829938194830015-intron-Distal4.195624.24993K562HNRNPL
chr3194829899194830011-intron-Distal4.325865.19501HepG2EIF3D
chr3194831888194831946-intron-Distal4.121483.03048HepG2GTF2F1
chr3194832132194832186-intron-Distal4.699655.50419HepG2LARP4
chr3194985735194985793-intron-Distal3.270024.08528HepG2SUGP2
chr3194986465194986552-intron-Distal3.663143.68481HepG2HNRNPM
chr3194830092194830120-intron-Distal5.6255820.05790HepG2XPO5
chr3194829875194830044-intron-Distal3.903204.06464HepG2CSTF2
chr3194829950194829999-intron-Distal6.5555623.60376K562AGGF1
chr3194829966194830034-intron-Distal6.8672720.08381HepG2XPO5
chr3194830121194830185-intron-Distal4.1324110.74543HepG2HNRNPL
chr3194831742194831802-intron-Distal5.796619.60347HepG2AGGF1
chr3194830120194830144-intron-Distal5.3345710.82244HepG2XPO5
chr3194830022194830180-intron-Distal8.4668379.59944K562AGGF1
chr3194830258194830334-intron-Distal4.4664214.31284HepG2AGGF1
chr3194830087194830121-intron-Distal4.7888812.89472HepG2HNRNPL
chr3194831900194831950-intron-Distal4.530154.27047K562AKAP8L
chr3194830073194830170-intron-Distal5.5229610.16121HepG2CDC40
chr3194829928194829991-intron-Distal4.409423.17679K562DDX52
chr3194830055194830126-intron-Distal4.398636.49145K562AKAP8L
chr3194831763194831956-intron-Distal4.902589.00998HepG2YBX3
chr3194829936194830026-intron-Distal3.745453.50564HepG2YBX3
chr3194833433194833590-intron-Distal4.960384.97791HepG2RBFOX2
chr3194829929194830048-intron-Distal4.5245110.31962HepG2LARP4
chr3194830144194830224-intron-Distal6.8927917.86278HepG2XPO5
chr3194990329194990433-intron-Distal3.388577.80569HepG2SUGP2
chr3194833289194833354-intron-Distal5.741538.64931HepG2AGGF1
chr3194860935194861022-intron-Distal5.7630611.90344HepG2QKI
chr3194830142194830189-intron-Distal5.5491821.27646HepG2AGGF1
chr3194831755194831788-intron-Distal5.460266.88699HepG2XPO5
chr3194831885194831951-intron-Distal4.159746.25649HepG2CDC40
chr3194977880194977957-intron-Distal4.195253.28464K562EWSR1
chr3194833115194833186-intron-Distal4.023283.83024HepG2IGF2BP1
chr3194968683194968728-intron-Distal,intron-Proximal3.812903.00349HepG2ILF3
chr3194831893194831972-intron-Distal4.474166.18384K562HNRNPL
chr3194833061194833158-intron-Distal6.3409610.00047K562EIF4G2
chr3194830048194830087-intron-Distal6.5108520.33050HepG2HNRNPL
chr3194829990194830049-intron-Distal4.061125.55601HepG2GTF2F1
chr3194832100194832274-intron-Distal4.214324.68532HepG2YBX3
chr3194830037194830143-intron-Distal4.778874.46189K562GTF2F1
chr3194831832194831855-intron-Distal3.864954.88761HepG2HNRNPL
chr3194833109194833177-intron-Distal5.1097419.41722K562AKAP8L
chr3194833449194833504-intron-Distal4.409423.17679K562DDX52
chr3194830049194830154-intron-Distal5.6370012.83525HepG2GTF2F1
chr3194833444194833500-intron-Distal4.297133.69238K562GTF2F1
chr3194980251194980304-intron-Distal3.040313.00221HepG2CSTF2T
chr3194830015194830124-intron-Distal4.874318.62021K562HNRNPL
chr3194829890194829990-intron-Distal4.195375.55601HepG2GTF2F1
chr3194987169194987226-intron-Distal3.700783.38413HepG2HNRNPC
chr3194831770194831876-intron-Distal5.115386.41765K562GTF2F1
chr3194905761194905825-intron-Distal4.950825.89856K562PTBP1
chr3194989738194989786-intron-Distal3.183803.84025HepG2SUGP2
chr3194830061194830092-intron-Distal6.3345723.29224HepG2XPO5
chr3194859782194859852-intron-Distal3.942833.30440HepG2QKI
chr3194974887194974946-intron-Distal4.139863.72398HepG2SFPQ
chr3194831891194831967-intron-Distal3.569425.31818K562GTF2F1
chr3194829945194830027-intron-Distal3.980563.02250K562YBX3
chr3194979309194979354-intron-Distal4.127163.62366HepG2HNRNPM
chr3194830025194830152-intron-Distal3.759843.08342HepG2AKAP1
chr3194830027194830182-intron-Distal4.544885.43239K562YBX3
chr3194833461194833506-intron-Distal3.582293.27465HepG2AGGF1
chr3194831357194831398-intron-Distal5.114706.53047K562AGGF1
chr3194970124194970206-intron-Distal4.350893.62366HepG2HNRNPM
chr3194832495194832542-intron-Distal3.591314.92926HepG2LARP4
chr3194833427194833562-intron-Distal6.5956615.93547K562EIF4G2
chr3194831817194831869-intron-Distal3.899683.80299K562HNRNPL
chr3194833315194833384-intron-Distal3.949053.14375HepG2RBFOX2
chr3194831821194831884-intron-Distal4.946556.09743HepG2LARP4
chr3194987937194988037-intron-Distal3.633814.60009HepG2SUGP2
chr3194831995194832031-intron-Distal5.460759.25109K562AGGF1
chr3194830126194830307-intron-Distal6.0913411.92824K562AKAP8L
chr3194831986194832029-intron-Distal4.308744.61933HepG2LARP4
chr3194833109194833186-intron-Distal6.437177.91709HepG2DKC1
chr3194871433194871592-intron-Distal4.459145.44904K562TARDBP
chr3194833180194833221-intron-Distal5.313736.43973HepG2AGGF1
chr3194833468194833505-intron-Distal4.677083.70058HepG2XPO5
chr3194833531194833587-intron-Distal4.313343.77360K562GTF2F1
chr3194833109194833220-intron-Distal7.3278339.06573K562AGGF1
chr3194833158194833231-intron-Distal5.323505.14653K562EIF4G2
chr3194833177194833235-intron-Distal6.2314417.36915K562AKAP8L
chr3194824862194824921-intron-Distal3.901093.32571HepG2AGGF1
chr3194830054194830253-intron-Distal5.1644310.54263HepG2YBX3
chr3194829980194830027-intron-Distal4.574785.00643HepG2CDC40
chr3194830048194830196-intron-Distal4.9329213.27382HepG2LARP4
chr3194833535194833573-intron-Distal4.699655.48383HepG2LARP4
chr3194833104194833226-intron-Distal4.5118610.73594K562HNRNPL
chr3194831445194831512-intron-Distal6.3261517.08587K562AGGF1
chr3194833449194833489-intron-Distal5.201667.88608K562AGGF1
chr3194871456194871547-intron-Distal5.120686.10540K562EIF4G2
chr3194831895194831954-intron-Distal3.966113.46958K562YBX3
chr3194831832194831853-intron-Distal5.797789.13495HepG2AGGF1
chr3194833058194833170-intron-Distal5.5560610.03041K562GTF2F1
chr3194831884194831945-intron-Distal4.0664910.54356HepG2LARP4
chr3194832482194832539-intron-Distal4.213164.51896HepG2XPO5
chr3194830051194830142-intron-Distal6.5085851.92732HepG2AGGF1
chr3194830034194830061-intron-Distal6.5565816.75429HepG2XPO5
chr3194980110194980162-intron-Distal3.876133.07008K562NONO
chr3194829893194830009-intron-Distal5.226577.60596K562GTF2F1
chr3194897029194897078-intron-Distal3.684865.03283HepG2RBFOX2
chr3194906096194906161-intron-Distal4.478053.91475K562PTBP1
chr3194830195194830244-intron-Distal5.5045518.59605HepG2AGGF1
chr3194829919194830051-intron-Distal7.6838149.74637HepG2AGGF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for XXYLT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for XXYLT1 is not available on ENCORE database.

  • 76 RBPs can affect the levels of XXYLT1.  








The Knockdown/knockout RNA-Seq assay for XXYLT1 is not available on ENCORE database.





76 RBPs can affect the gene expression of XXYLT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
XXYLT1ENSG00000173950.11991.59010688.087800.527103.496002.90650HepG2AKAP1
XXYLT1ENSG00000173950.11223.20840368.66530-0.723904.638403.49890HepG2BCLAF1
XXYLT1ENSG00000173950.11353.55770589.77360-0.738207.638306.44490HepG2CALR
XXYLT1ENSG00000173950.11338.24970540.89070-0.677205.011903.98780HepG2CIRBP
XXYLT1ENSG00000173950.11179.13540282.57080-0.657602.546101.81410HepG2CNOT7
XXYLT1ENSG00000173950.11976.17930630.518800.630506.266605.26250HepG2CPSF6
XXYLT1ENSG00000173950.11218.01120410.78680-0.914007.904006.81680HepG2DDX21
XXYLT1ENSG00000173950.11839.87680659.079200.349601.950401.41650HepG2DDX3X
XXYLT1ENSG00000173950.11295.63780417.23610-0.497002.694101.92880HepG2DDX55
XXYLT1ENSG00000173950.11343.80410486.50000-0.500902.693202.02380HepG2DKC1
XXYLT1ENSG00000173950.11295.49270394.40540-0.416603.045902.36770HepG2DNAJC2
XXYLT1ENSG00000173950.11289.75480544.26180-0.909508.023907.05090HepG2EIF2S1
XXYLT1ENSG00000173950.11417.43040601.40900-0.526803.225602.53650HepG2EIF4A3
XXYLT1ENSG00000173950.11375.17160621.43060-0.728006.637005.40280HepG2EIF4G2
XXYLT1ENSG00000173950.111066.79260827.206900.366902.877602.26630HepG2ETF1
XXYLT1ENSG00000173950.11128.52640347.25550-1.4339013.1812010.82660HepG2FKBP4
XXYLT1ENSG00000173950.11340.60930597.79910-0.811507.126605.68320HepG2G3BP2
XXYLT1ENSG00000173950.11491.78280682.10490-0.472003.028602.37400HepG2HNRNPLL
XXYLT1ENSG00000173950.11200.54460483.99100-1.2711015.5230013.58530HepG2HNRNPM
XXYLT1ENSG00000173950.11177.22460275.43570-0.636102.686201.39160HepG2ILF3
XXYLT1ENSG00000173950.11447.18730607.20350-0.441302.568201.93490HepG2MAGOH
XXYLT1ENSG00000173950.11388.33930567.77010-0.548003.872802.91950HepG2MSI2
XXYLT1ENSG00000173950.11365.91110556.87060-0.605804.639902.58460HepG2NUP35
XXYLT1ENSG00000173950.11299.71300505.75520-0.754904.571603.26170HepG2PCBP2
XXYLT1ENSG00000173950.11213.85590321.72580-0.589203.183802.32310HepG2PRPF8
XXYLT1ENSG00000173950.11275.67570598.93670-1.1194018.0110016.84510HepG2PTBP1
XXYLT1ENSG00000173950.11203.09290517.95880-1.3507016.1048014.83700HepG2PUS1
XXYLT1ENSG00000173950.11830.44530648.639700.356402.853102.22080HepG2QKI
XXYLT1ENSG00000173950.11202.79870488.03040-1.266908.356907.17450HepG2RAVER1
XXYLT1ENSG00000173950.11470.64880691.37610-0.554804.771404.13770HepG2RBM22
XXYLT1ENSG00000173950.11533.53640666.54990-0.321102.264401.76480HepG2NELFE
XXYLT1ENSG00000173950.11441.00170657.93890-0.577204.534603.68890HepG2RPLP0
XXYLT1ENSG00000173950.11338.92150479.45870-0.500502.233001.38270HepG2RPS10
XXYLT1ENSG00000173950.11297.53920395.31420-0.409902.761402.11740HepG2SAFB2
XXYLT1ENSG00000173950.11134.50900373.68580-1.4741015.1012013.02120HepG2SERBP1
XXYLT1ENSG00000173950.11473.17400623.55060-0.398103.183302.55430HepG2SF3B4
XXYLT1ENSG00000173950.11344.92140497.79460-0.529302.744301.79170HepG2SMNDC1
XXYLT1ENSG00000173950.11483.02330751.22850-0.637203.511802.62680HepG2SNRNP70
XXYLT1ENSG00000173950.11569.78080780.85600-0.454604.144103.56730HepG2SRFBP1
XXYLT1ENSG00000173950.11532.90140650.85990-0.288501.932701.51730HepG2SRSF1
XXYLT1ENSG00000173950.11361.57070529.51620-0.550405.455504.72540HepG2SRSF9
XXYLT1ENSG00000173950.11490.36960677.91920-0.467203.478502.91830HepG2SSB
XXYLT1ENSG00000173950.11923.44700698.919900.401802.977302.33670HepG2SUCLG1
XXYLT1ENSG00000173950.11297.76260415.31210-0.480002.577801.92230HepG2SUPV3L1
XXYLT1ENSG00000173950.11329.63770431.33780-0.387902.336201.86890HepG2TIAL1
XXYLT1ENSG00000173950.11636.27270435.188100.547904.173603.50910HepG2TRIM56
XXYLT1ENSG00000173950.11333.32960600.03970-0.848107.115706.11640HepG2U2AF1
XXYLT1ENSG00000173950.11420.73100643.62330-0.613303.882202.88330HepG2UBE2L3
XXYLT1ENSG00000173950.11786.16030611.771400.361703.565402.78900HepG2UPF1
XXYLT1ENSG00000173950.11784.28950628.824000.318602.276101.31200HepG2UTP18
XXYLT1ENSG00000173950.11476.25990590.64300-0.310502.243301.69190HepG2UTP3
XXYLT1ENSG00000173950.11539.58650672.83300-0.318402.863302.30950HepG2ZNF622
XXYLT1ENSG00000173950.11213.69500365.29260-0.773505.482204.54580K562AKAP8L
XXYLT1ENSG00000173950.11250.53970426.52490-0.767603.896003.22340K562AQR
XXYLT1ENSG00000173950.11270.72980383.28420-0.501603.225202.23430K562ATP5C1
XXYLT1ENSG00000173950.11564.06580400.960700.492304.341103.46810K562EIF2S2
XXYLT1ENSG00000173950.11117.75680189.02140-0.682703.238401.77770K562FUS
XXYLT1ENSG00000173950.11314.97530204.016200.626503.977203.27120K562FXR1
XXYLT1ENSG00000173950.1181.06400157.99690-0.962803.900703.02660K562G3BP2
XXYLT1ENSG00000173950.11781.78670534.342300.548904.765603.77390K562GRSF1
XXYLT1ENSG00000173950.11259.95010351.04770-0.433402.376001.38440K562HNRNPA1
XXYLT1ENSG00000173950.11171.18190324.33000-0.921905.929204.49830K562HNRNPM
XXYLT1ENSG00000173950.11273.07420387.65860-0.505502.632201.83010K562KIF1C
XXYLT1ENSG00000173950.11198.74280304.39720-0.615102.517801.68560K562NAA15
XXYLT1ENSG00000173950.11147.52660255.11270-0.790202.633701.67300K562PABPN1
XXYLT1ENSG00000173950.11270.42790393.54310-0.541302.888402.03830K562PCBP3
XXYLT1ENSG00000173950.11197.62120317.39880-0.683603.977802.22130K562PHF6
XXYLT1ENSG00000173950.11837.15440609.559400.457604.129502.94890K562PUM2
XXYLT1ENSG00000173950.1167.69080362.25360-2.4200029.2921027.50560K562PUS1
XXYLT1ENSG00000173950.11209.46880352.97510-0.752805.558504.74350K562RBM15
XXYLT1ENSG00000173950.11176.68840265.90340-0.589703.044802.00020K562RCC2
XXYLT1ENSG00000173950.11146.84920224.77970-0.614202.322001.57660K562RPS19
XXYLT1ENSG00000173950.1182.73100188.83250-1.190605.438803.28080K562SERBP1
XXYLT1ENSG00000173950.11133.91430219.03530-0.709903.798601.66950K562SLTM
XXYLT1ENSG00000173950.11353.64410447.54650-0.339702.162801.32580K562SRPK2
XXYLT1ENSG00000173950.11254.41770359.41840-0.498503.271501.98980K562SRSF7
XXYLT1ENSG00000173950.11140.56390213.65500-0.604102.348101.41570K562SUPV3L1
XXYLT1ENSG00000173950.1192.47600153.17760-0.728102.581601.52860K562U2AF1
XXYLT1ENSG00000173950.11103.82640158.19020-0.607502.355401.61450K562U2AF2
XXYLT1ENSG00000173950.11259.94590401.64550-0.627704.584403.44340K562WDR3
XXYLT1ENSG00000173950.11431.40950242.983000.828103.870401.92220K562XRCC6
XXYLT1ENSG00000173950.11301.11840480.58590-0.674503.209502.27140K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for XXYLT1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of XXYLT1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for XXYLT1 is not avaliable on ENCORE database.