WTAP

General Information

Gene Name : WTAP
Gene ID : ENSG00000146457.15
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: WTAP)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	WTAP	ENSG00000146457.15	66.04	61.39	63.72	ENCSR000AEF
HepG2	WTAP	ENSG00000146457.15	80.90	112.20	96.55	ENCSR985KAT
K562	WTAP	ENSG00000146457.15	103.23	104.66	103.94	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for WTAP is not avaliable on ENCORE database.

Proteins bound to RNA

WTAP RNA is bound by 32 proteins.

CanvasJS.com

eCLIP assay for WTAP is not avaliable on ENCORE database.

32 proteins are bound to WTAP RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	160169585	160169661	+	3'-UTR,intron-Distal	5.66005	400.00000	HepG2	U2AF2
chr6	160148600	160148701	+	5'-UTR,intron-Distal	3.91232	35.63461	HepG2	DDX3X
chr6	160169603	160169665	+	3'-UTR,intron-Distal	4.54349	25.61834	K562	U2AF2
chr6	160165738	160165821	+	intron-Distal	5.64994	24.85548	HepG2	QKI
chr6	160169585	160169663	+	3'-UTR,intron-Distal	5.08580	22.80391	HepG2	U2AF1
chr6	160163134	160163215	+	CDS,intron-Proximal	6.18080	21.61394	HepG2	PRPF8
chr6	160174392	160174475	+	intron-Proximal	4.27203	21.19882	K562	KHSRP
chr6	160169591	160169662	+	3'-UTR,intron-Distal	4.26951	19.68973	K562	U2AF1
chr6	160174349	160174392	+	intron-Distal	4.93692	18.37957	K562	KHSRP
chr6	160174539	160174648	+	CDS,intron-Proximal	3.54062	17.09012	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 143 entries

eCLIP assay for WTAP is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for WTAP is not available on ENCORE database.
65 RBPs can affect the levels of WTAP.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for WTAP is not available on ENCORE database.

65 RBPs can affect the gene expression of WTAP :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
WTAP	ENSG00000146457.10	5953.45880	2116.91160	1.49170	46.65310	44.34610	K562	PUS1
WTAP	ENSG00000146457.10	5254.63400	2802.20970	0.90690	40.55890	38.35770	K562	DDX47
WTAP	ENSG00000146457.10	3608.97000	2062.47580	0.80710	22.59970	20.83300	K562	RBM15
WTAP	ENSG00000146457.10	3313.78320	2051.26260	0.69190	21.69140	20.21090	K562	AGGF1
WTAP	ENSG00000146457.10	3642.12420	2519.41710	0.53160	14.74650	13.83990	HepG2	SRSF1
WTAP	ENSG00000146457.10	5144.58280	3083.33080	0.73850	13.20760	12.06140	K562	AQR
WTAP	ENSG00000146457.10	4129.53270	2988.41930	0.46650	12.61540	11.67680	HepG2	SSB
WTAP	ENSG00000146457.10	1373.30680	2055.23640	-0.58170	12.37180	10.90970	HepG2	PRPF4
WTAP	ENSG00000146457.10	3077.99180	2201.70730	0.48330	11.88360	10.77720	HepG2	UTP3
WTAP	ENSG00000146457.10	2459.23860	1612.02460	0.60920	10.84910	9.22660	K562	SYNCRIP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 71 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for WTAP is not available on ENCORE database.

3 RBPs can affect the splicing of WTAP :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	WTAP	ENSG00000146457.10	chr6	+	160150652	160150841	160146616	160148365	160157289	160157327	0.15500	0.00000	0.00000	included	K562	AQR
SE	WTAP	ENSG00000146457.10	chr6	+	160170876	160171042	160169222	160169401	160174491	160174646	0.10100	0.00004	0.00133	included	K562	SRSF1
SE	WTAP	ENSG00000146457.10	chr6	+	160162393	160162479	160160021	160160077	160163119	160163178	0.05600	0.00031	0.01504	included	K562	PRPF8
A3SS	WTAP	ENSG00000146457.10	chr6	+	160157249	160157327	160157289	160157327	160148619	160148735	0.05300	0.00669	0.03730	longer	K562	AQR

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

WTAP

General Information

Functions

Localization

Domains (AlphaFold: WTAP)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for WTAP is not avaliable on ENCORE database.

32 proteins are bound to WTAP RNA:

eCLIP assay for WTAP is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for WTAP is not available on ENCORE database.

65 RBPs can affect the gene expression of WTAP :

The Knockdown/knockout RNA-Seq assay for WTAP is not available on ENCORE database.

3 RBPs can affect the splicing of WTAP :

The Knockdown/knockout RNA-Seq assay for WTAP is not avaliable on ENCORE database.