UBL5

General Information

Gene Name       : UBL5
Gene ID             : ENSG00000198258.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: UBL5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878UBL5ENSG00000198258.10214.79294.73254.76ENCSR000AEF
HepG2UBL5ENSG00000198258.10320.94306.52313.73ENCSR985KAT
K562UBL5ENSG00000198258.10435.12412.53423.82ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for UBL5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • UBL5 RNA is bound by 24 proteins.  







eCLIP assay for UBL5 is not avaliable on ENCORE database.





24 proteins are bound to UBL5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1999406399940660+3'-UTR,CDS,intron-Proximal5.0575821.73243HepG2LARP4
chr1999406719940755+3'-UTR,CDS3.5398049.96549K562PABPC4
chr1999406729940749+3'-UTR,CDS3.686569.57120K562PCBP1
chr1999406819940716+3'-UTR4.1291043.87491K562TIA1
chr1999406879940761+3'-UTR7.0762199.77144HepG2LARP4
chr1999406609940687+3'-UTR,CDS5.8629044.85970HepG2LARP4
chr1999406749940745+3'-UTR,CDS5.169786.42882HepG2TIAL1
chr1999406629940758+3'-UTR,CDS3.404595.72266HepG2AKAP1
chr1999406769940760+3'-UTR,CDS3.9990828.47282HepG2PCBP2
chr1999406409940673+3'-UTR,CDS,intron-Proximal3.251805.00913HepG2LIN28B
chr1999406399940671+3'-UTR,CDS,intron-Proximal3.4825117.46960K562PABPC4
chr1999406819940748+3'-UTR5.400145.16101HepG2PCBP1
chr1999406759940742+3'-UTR,CDS4.917736.10242HepG2TIA1
chr1999407169940730+3'-UTR4.3608343.25760K562TIA1
chr1999406409940664+3'-UTR,CDS,intron-Proximal5.495329.22045K562LIN28B
chr1999407309940760+3'-UTR4.5029627.86179K562TIA1
chr1999406829940758+3'-UTR3.567037.63056HepG2DDX55
chr1999386409938691+5'-UTR,intron-Proximal3.240683.75245K562BUD13
chr1999386629938702+5'-UTR,intron-Proximal4.501078.01338K562AQR
chr1999385879938647+5'-UTR,intron-Proximal4.7446662.84424K562DDX3X
chr1999389599939004+5'-UTR,intron-Proximal4.574994.97857HepG2AQR
chr1999385989938656+5'-UTR,intron-Proximal3.2583022.33803K562PABPC4
chr1999389919939081+5'-UTR,CDS,intron-Proximal3.135235.51079K562BUD13
chr1999389639939007+5'-UTR,intron-Proximal3.119166.52662K562AQR
chr1999386739938731+5'-UTR,intron-Distal,intron-Proximal4.806465.13875K562DDX6
chr1999385869938663+5'-UTR,intron-Proximal3.8115413.30710K562RPS3
chr1999390019939019+5'-UTR,CDS,intron-Proximal3.577494.41784HepG2GRWD1
chr1999390029939065+5'-UTR,CDS,intron-Proximal3.816959.59713K562GEMIN5
chr1999385899938664+5'-UTR,intron-Proximal5.5386210.36536K562EIF3G
chr1999390019939069+5'-UTR,CDS,intron-Proximal3.496749.78362K562APOBEC3C
chr1999386349938698+5'-UTR,intron-Proximal4.0030714.13124HepG2PRPF8
chr1999385969938662+5'-UTR,intron-Proximal4.7900846.38631HepG2DDX3X
chr1999390029939024+5'-UTR,CDS,intron-Proximal3.7283241.28765K562DDX3X
chr1999386479938661+5'-UTR,intron-Proximal4.1235440.71496K562DDX3X
chr1999390029939013+5'-UTR,intron-Proximal3.415367.37102HepG2LARP4
chr1999386019938668+5'-UTR,intron-Proximal3.823183.00640HepG2ZC3H11A
chr1999386689938683+5'-UTR,intron-Proximal3.991828.50867K562PABPC4
chr1999386009938674+5'-UTR,intron-Proximal3.572608.48142K562GEMIN5
chr1999386399938660+5'-UTR,intron-Proximal3.756259.88187HepG2LARP4
chr1999386629938664+5'-UTR,intron-Proximal3.826227.71026K562PABPC4
chr1999385979938678+5'-UTR,intron-Proximal3.357385.72050K562NCBP2
chr1999390029939019+5'-UTR,CDS,intron-Proximal3.8670515.91425HepG2DDX3X
chr1999386149938639+5'-UTR,intron-Proximal3.316296.91779HepG2LARP4
chr1999390029939057+5'-UTR,CDS,intron-Proximal3.507675.72619K562DROSHA
chr1999386009938662+5'-UTR,intron-Proximal3.912126.74466K562DROSHA
chr1999390029939019+5'-UTR,CDS,intron-Proximal3.004903.41930K562PABPC4
chr1999390169939072+CDS,intron-Proximal4.910258.80366K562GRWD1
chr1999393099939341+CDS,intron-Distal4.400709.16812HepG2LARP4
chr1999390659939075+CDS,intron-Proximal3.7406419.52825K562AQR
chr1999393249939351+CDS,intron-Distal4.685494.78556K562LIN28B
chr1999395119939552+CDS,intron-Distal,intron-Proximal3.795779.53843HepG2LIN28B
chr1999395129939518+CDS,intron-Distal,intron-Proximal4.395934.13050K562LIN28B
chr1999395189939551+CDS,intron-Distal,intron-Proximal4.2517015.99136HepG2LARP4
chr1999392199939292+CDS,intron-Distal,intron-Proximal4.4161111.69745K562AQR
chr1999395189939551+CDS,intron-Distal,intron-Proximal5.3898920.93157K562LIN28B
chr1999390249939069+CDS,intron-Proximal3.3809751.18735K562DDX3X
chr1999390199939068+CDS,intron-Proximal3.8914425.84103K562PABPC4
chr1999393509939394+CDS,intron-Distal,intron-Proximal5.065467.02967HepG2PRPF8
chr1999390499939131+CDS,intron-Proximal4.2854614.00282HepG2PRPF8
chr1999393069939352+CDS,intron-Distal,intron-Proximal3.237993.47879HepG2PPIG
chr1999390639939079+CDS,intron-Proximal4.8969112.20271HepG2AQR
chr1999390139939068+CDS,intron-Proximal4.8505325.38878HepG2LARP4
chr1999392129939288+CDS,intron-Distal,intron-Proximal3.783367.87148HepG2PRPF8
chr1999395309939537+CDS,intron-Distal4.150766.56262K562TIA1
chr1999390449939075+CDS,intron-Proximal3.625566.81726HepG2GRWD1
chr1999392359939286+CDS,intron-Distal,intron-Proximal4.048756.92290HepG2AQR
chr1999392679939280+CDS,intron-Distal,intron-Proximal4.541908.59403HepG2LARP4
chr1999390289939062+CDS4.794678.14065K562RPS3
chr1999395169939551+CDS,intron-Distal,intron-Proximal3.430057.71511K562APOBEC3C
chr1999392679939290+CDS,intron-Distal,intron-Proximal3.217617.26044K562DDX55
chr1999395199939551+CDS,intron-Distal,intron-Proximal3.3843419.36962K562PABPC4
chr1999392349939337+CDS,intron-Distal,intron-Proximal4.157728.39611HepG2GRWD1
chr1999393559939372+intron-Distal,intron-Proximal4.560864.09264K562AQR
chr1999394019939460+intron-Distal,intron-Proximal5.690868.41916K562EFTUD2
chr1999393729939391+intron-Distal,intron-Proximal4.895794.86944K562AQR
chr1999387549938815+intron-Distal,intron-Proximal4.065707.90583K562AQR
chr1999390799939110+intron-Proximal5.9908314.65613HepG2AQR
chr1999390819939131+intron-Proximal3.224263.13705K562BUD13
chr1999389339938990+intron-Proximal5.330296.03057K562EFTUD2
chr1999390759939136+intron-Proximal4.5608630.04192K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for UBL5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for UBL5 is not available on ENCORE database.

  • 79 RBPs can affect the levels of UBL5.  








The Knockdown/knockout RNA-Seq assay for UBL5 is not available on ENCORE database.





79 RBPs can affect the gene expression of UBL5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
UBL5ENSG00000198258.62176.942801656.851900.393802.670002.14750HepG2AKAP1
UBL5ENSG00000198258.61730.801601370.900500.336202.339201.61440HepG2ASCC1
UBL5ENSG00000198258.61626.363501380.672800.236202.477201.82090HepG2AUH
UBL5ENSG00000198258.61215.03070899.079400.434402.619801.70980HepG2BCCIP
UBL5ENSG00000198258.6486.89050366.814000.408402.257301.71140HepG2BOP1
UBL5ENSG00000198258.6605.30190846.83420-0.484406.555705.61170HepG2CKAP4
UBL5ENSG00000198258.6917.85560627.645000.548202.862902.08450HepG2CNOT7
UBL5ENSG00000198258.6769.19320555.314200.469903.392602.21190HepG2CSTF2
UBL5ENSG00000198258.61468.060601264.171900.215602.110101.53660HepG2CELF1
UBL5ENSG00000198258.61549.420101359.116100.189002.317101.63070HepG2DAZAP1
UBL5ENSG00000198258.6921.36580783.388500.233902.118701.38150HepG2DDX19B
UBL5ENSG00000198258.62024.472301587.127200.351002.509101.91130HepG2DDX3X
UBL5ENSG00000198258.61079.318701341.00570-0.313203.292402.39370HepG2EIF4G1
UBL5ENSG00000198258.61333.526501585.19880-0.249402.720902.12430HepG2ETF1
UBL5ENSG00000198258.61137.96310827.691700.459204.531703.46770HepG2EWSR1
UBL5ENSG00000198258.6678.12640875.77650-0.369002.729701.94910HepG2FUBP3
UBL5ENSG00000198258.61103.432501439.23260-0.383302.772901.88180HepG2G3BP2
UBL5ENSG00000198258.6723.01120529.758700.448603.360002.65640HepG2HNRNPA1
UBL5ENSG00000198258.61189.768701504.72810-0.338802.162001.59950HepG2NCBP2
UBL5ENSG00000198258.6883.355101340.03440-0.601205.621404.60330HepG2PABPC4
UBL5ENSG00000198258.61010.674401347.29320-0.414706.067105.22400HepG2PCBP1
UBL5ENSG00000198258.61062.952401370.86300-0.367004.764904.08930HepG2PTBP1
UBL5ENSG00000198258.61074.639301484.80260-0.466406.172505.29140HepG2QKI
UBL5ENSG00000198258.62213.903501324.932500.740608.236307.45260HepG2RBM22
UBL5ENSG00000198258.61170.563701525.68730-0.382305.305804.59570HepG2NELFE
UBL5ENSG00000198258.6773.312501420.88260-0.8777021.8899020.43920HepG2RECQL
UBL5ENSG00000198258.6739.89240521.290400.505106.132605.23110HepG2SAFB2
UBL5ENSG00000198258.6873.04610560.298400.639802.190901.58990HepG2SF3A3
UBL5ENSG00000198258.61000.666801427.34980-0.512408.576807.62500HepG2SF3B4
UBL5ENSG00000198258.6817.54140607.917100.427305.289604.44880HepG2SMN1
UBL5ENSG00000198258.6582.06590401.177600.536802.404301.67830HepG2SNRNP70
UBL5ENSG00000198258.61926.082601496.461900.364006.255005.58500HepG2SRFBP1
UBL5ENSG00000198258.61162.359301489.80150-0.358104.245203.69010HepG2SRSF1
UBL5ENSG00000198258.6766.688401211.99620-0.6607013.3905012.33860HepG2SRSF9
UBL5ENSG00000198258.6430.30210657.16880-0.610903.132201.84580HepG2SUB1
UBL5ENSG00000198258.6635.90580474.195900.423202.667201.74170HepG2SUPT6H
UBL5ENSG00000198258.61238.16970879.982300.492603.480602.73300HepG2SUPV3L1
UBL5ENSG00000198258.6819.675101338.97340-0.708005.678004.92440HepG2TAF15
UBL5ENSG00000198258.6713.334101230.45970-0.7865012.9666011.18740HepG2TIA1
UBL5ENSG00000198258.6886.90490568.801900.640807.899907.13400HepG2TIAL1
UBL5ENSG00000198258.6437.66460706.36420-0.690604.257902.45930HepG2TRA2A
UBL5ENSG00000198258.6804.22020573.868800.486806.043105.26650HepG2TRIM56
UBL5ENSG00000198258.6954.86960519.817000.8772010.207608.75340HepG2UCHL5
UBL5ENSG00000198258.6624.31170496.895500.329202.626501.94270HepG2UPF1
UBL5ENSG00000198258.61180.50340805.734200.550903.229802.14260HepG2UPF2
UBL5ENSG00000198258.6617.67020479.738500.364502.900502.29110HepG2UTP3
UBL5ENSG00000198258.6469.75220691.79850-0.558502.896601.60660HepG2XRCC5
UBL5ENSG00000198258.61121.74050866.246700.372802.284201.61990HepG2XRN2
UBL5ENSG00000198258.6725.64640546.494900.409002.693202.15190HepG2ZNF622
UBL5ENSG00000198258.62029.036101073.427500.9185027.2262025.56160K562AGGF1
UBL5ENSG00000198258.61645.578901179.574700.480202.768901.78680K562AKAP8
UBL5ENSG00000198258.62189.267501116.959800.9708019.8750017.80940K562AKAP8L
UBL5ENSG00000198258.64804.689202586.891300.8931010.403309.37530K562AQR
UBL5ENSG00000198258.61475.195101171.978400.331903.765402.68700K562ATP5C1
UBL5ENSG00000198258.6449.23540600.01360-0.417502.551601.54780K562CCAR1
UBL5ENSG00000198258.61044.718901306.33820-0.322403.602502.87110K562DDX47
UBL5ENSG00000198258.61527.558201119.340000.448503.830002.74320K562EFTUD2
UBL5ENSG00000198258.6301.92580610.31260-1.015406.337604.76620K562EIF3A
UBL5ENSG00000198258.61394.67230899.278000.633007.680406.19860K562FIP1L1
UBL5ENSG00000198258.6614.90910807.20620-0.392602.429001.38450K562FKBP4
UBL5ENSG00000198258.6640.193001016.69920-0.667305.069904.04670K562G3BP2
UBL5ENSG00000198258.6812.197001017.16870-0.324702.829701.67570K562GLRX3
UBL5ENSG00000198258.63351.371702437.833600.459103.994603.08940K562GRSF1
UBL5ENSG00000198258.6607.07020929.25800-0.614206.651705.76630K562HNRNPC
UBL5ENSG00000198258.61305.81590739.693700.819909.407907.48260K562HNRNPM
UBL5ENSG00000198258.61588.007702049.28230-0.367904.671603.50390K562HNRNPU
UBL5ENSG00000198258.61800.506701185.338900.603006.365104.99590K562KIF1C
UBL5ENSG00000198258.6275.77200469.34060-0.767203.658402.56680K562KRR1
UBL5ENSG00000198258.61610.743001327.883800.278502.462701.61290K562MBNL1
UBL5ENSG00000198258.61413.46260930.753400.602704.676403.43350K562NAA15
UBL5ENSG00000198258.61766.980601082.805700.706403.693402.50300K562PABPN1
UBL5ENSG00000198258.61659.568901020.894100.700909.318707.57310K562PPIG
UBL5ENSG00000198258.62278.049401089.248501.0644020.1744018.14000K562PRPF8
UBL5ENSG00000198258.62531.196501107.647101.1922026.5900024.90050K562PUS1
UBL5ENSG00000198258.61931.130001079.293700.8393013.1180011.82220K562RBM15
UBL5ENSG00000198258.6665.98820967.84140-0.539304.824902.90430K562SDAD1
UBL5ENSG00000198258.61370.225401172.538200.224702.095101.37890K562SF3A3
UBL5ENSG00000198258.6857.606101195.79960-0.479605.561003.35710K562SRSF9
UBL5ENSG00000198258.6535.80750998.00690-0.897303.237101.60900K562TAF15
UBL5ENSG00000198258.61899.070701567.611400.276601.898501.30480K562TARDBP
UBL5ENSG00000198258.6687.76140995.78800-0.533904.235702.02270K562TRNAU1AP
UBL5ENSG00000198258.61532.587301964.21660-0.358003.634401.71550K562UPF2
UBL5ENSG00000198258.6881.315401077.97880-0.290602.105101.34290K562WDR3
UBL5ENSG00000198258.62299.686702914.37020-0.341703.367102.40190K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for UBL5 is not available on ENCORE database.





12 RBPs can affect the splicing of UBL5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A5SSUBL5ENSG00000198258.6chr19+9938567993874099385679938660993900299390520.053000.000000.00129longerK562TARDBP
A5SSUBL5ENSG00000198258.6chr19+993856799387409938567993866099389039939052-0.087000.000080.00207shorterK562AQR
A5SSUBL5ENSG00000198258.6chr19+993856799387409938567993866099390029939069-0.054000.000000.00016shorterHepG2SRSF9
A5SSUBL5ENSG00000198258.6chr19+9938567993874099385679938660993900299390690.068000.000000.00008longerHepG2BCCIP
RIUBL5ENSG00000198258.6chr19+993900299393519939002993906999392679939351-0.082000.000010.00194excludedHepG2DDX59
RIUBL5ENSG00000198258.6chr19+9939002993935199390029939069993926799393510.140000.000000.00000includedHepG2SF3A3
RIUBL5ENSG00000198258.6chr19+9939002993935199390029939069993926799393510.052000.000060.02231includedHepG2DKC1
RIUBL5ENSG00000198258.6chr19+9939002993935199390029939069993926799393510.065000.000000.00000includedHepG2SRSF1
RIUBL5ENSG00000198258.6chr19+9939002993935199390029939069993926799393510.065000.000000.00005includedHepG2TIAL1
RIUBL5ENSG00000198258.6chr19+9939002993935199390029939069993926799393510.118000.000000.00000includedHepG2SF3B4
RIUBL5ENSG00000198258.6chr19+9939002993935199390029939069993926799393510.136000.000000.00000includedK562AQR
MXEUBL5ENSG00000198258.6chr19+993900299390529939212993935199385679938660993951299395500.154000.000000.000001includedK562SRSF1
MXEUBL5ENSG00000198258.6chr19+993900299390699939512993955099385679938740994064099407910.087000.001170.044061includedK562LIN28B
MXEUBL5ENSG00000198258.6chr19+993900299390699939512993955099385679938740994064099407910.107000.000000.000001includedK562TARDBP
MXEUBL5ENSG00000198258.6chr19+99390029939069993951299395509938567993874099406409940791-0.164000.004790.082082includedK562PPIL4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for UBL5 is not avaliable on ENCORE database.