TWISTNB

General Information

Gene Name       : TWISTNB
Gene ID             : ENSG00000105849.5
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TWISTNB)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TWISTNBENSG00000105849.523.2919.0421.16ENCSR000AEF
HepG2TWISTNBENSG00000105849.56.1512.019.08ENCSR985KAT
K562TWISTNBENSG00000105849.518.7422.0020.37ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TWISTNB is not avaliable on ENCORE database.



Proteins bound to RNA
  • TWISTNB RNA is bound by 5 proteins.  







eCLIP assay for TWISTNB is not avaliable on ENCORE database.





5 proteins are bound to TWISTNB RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr71973526919735306-3'-UTR,intron-Distal4.753047.90397K562PABPC4
chr71973676819736837-3'-UTR,intron-Distal4.447413.20319K562UPF1
chr71973603219736109-3'-UTR,intron-Distal3.008033.12067K562FAM120A
chr71974847719748619-CDS,intron-Distal4.9436913.05315K562DDX3X
chr71973820719738292-CDS,intron-Distal4.599804.42734K562UCHL5
chr71973803619738163-CDS,intron-Distal,intron-Proximal3.516625.76403K562UCHL5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TWISTNB is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TWISTNB is not available on ENCORE database.

  • 96 RBPs can affect the levels of TWISTNB.  








The Knockdown/knockout RNA-Seq assay for TWISTNB is not available on ENCORE database.





96 RBPs can affect the gene expression of TWISTNB :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TWISTNBENSG00000105849.5261.73820479.80520-0.874306.356304.99360HepG2ABCF1
TWISTNBENSG00000105849.5721.04810557.367800.371401.833001.39010HepG2AKAP1
TWISTNBENSG00000105849.5460.65090616.58310-0.420602.642202.05600HepG2BOP1
TWISTNBENSG00000105849.5657.35170507.915200.372002.532101.79250HepG2CALR
TWISTNBENSG00000105849.5419.64290658.63410-0.650303.939002.76340HepG2CCAR1
TWISTNBENSG00000105849.5399.34790566.07010-0.503303.279602.53720HepG2CPSF6
TWISTNBENSG00000105849.5474.42230576.84250-0.282002.108101.44840HepG2DAZAP1
TWISTNBENSG00000105849.5205.82600324.65570-0.657504.047603.24130HepG2DDX21
TWISTNBENSG00000105849.5695.81440533.957100.381902.119501.56490HepG2DDX3X
TWISTNBENSG00000105849.5400.38920642.80980-0.683003.358402.28390HepG2DDX59
TWISTNBENSG00000105849.5331.54270458.58390-0.468002.192001.63590HepG2DDX6
TWISTNBENSG00000105849.5177.57350350.12820-0.979507.280606.18290HepG2DNAJC21
TWISTNBENSG00000105849.5199.35710346.96510-0.799406.140505.22590HepG2DNAJC2
TWISTNBENSG00000105849.5178.13620305.35260-0.777504.726003.27520HepG2EFTUD2
TWISTNBENSG00000105849.5332.61340440.94340-0.406701.924801.42020HepG2EIF2S1
TWISTNBENSG00000105849.5399.69600545.15100-0.447802.765101.95010HepG2EIF4G2
TWISTNBENSG00000105849.5563.26990696.14450-0.305602.206001.65870HepG2ETF1
TWISTNBENSG00000105849.5356.14570491.56630-0.464902.526301.86370HepG2FXR1
TWISTNBENSG00000105849.5207.62040456.07340-1.1353010.392909.14510HepG2G3BP1
TWISTNBENSG00000105849.5447.92220641.72070-0.518703.151902.47370HepG2GPKOW
TWISTNBENSG00000105849.5168.73880353.48180-1.066808.674107.62440HepG2HNRNPA1
TWISTNBENSG00000105849.5291.30750393.15940-0.432602.147501.52740HepG2HNRNPC
TWISTNBENSG00000105849.5352.19700466.03850-0.404102.011201.39310HepG2HNRNPF
TWISTNBENSG00000105849.5365.74590612.40260-0.743606.140005.24260HepG2HNRNPLL
TWISTNBENSG00000105849.5323.00920458.92150-0.506703.203702.42880HepG2IGF2BP1
TWISTNBENSG00000105849.5291.21390398.95010-0.454102.580201.87010HepG2ILF2
TWISTNBENSG00000105849.5176.55620363.89520-1.043406.767404.83680HepG2KRR1
TWISTNBENSG00000105849.5446.08170695.08480-0.639904.229003.19620HepG2LARP4
TWISTNBENSG00000105849.5429.84170306.551800.487602.747201.61630HepG2LARP7
TWISTNBENSG00000105849.5739.82600494.512200.581103.720702.99910HepG2MATR3
TWISTNBENSG00000105849.5438.13210624.49200-0.511302.459601.54970HepG2MTPAP
TWISTNBENSG00000105849.5259.38060571.99570-1.1409016.6764014.89820HepG2NOL12
TWISTNBENSG00000105849.5377.27030475.84850-0.334902.085801.59820HepG2PTBP1
TWISTNBENSG00000105849.5285.34000406.35810-0.510104.065003.34380HepG2PUS1
TWISTNBENSG00000105849.5391.84180515.37840-0.395402.612702.00240HepG2QKI
TWISTNBENSG00000105849.5654.15150392.022500.738603.803002.98090HepG2RAVER1
TWISTNBENSG00000105849.5712.30690496.061800.521904.854303.75700HepG2RBM15
TWISTNBENSG00000105849.5865.36430581.855000.572507.173006.43050HepG2RBM22
TWISTNBENSG00000105849.5269.71330572.68270-1.086303.239501.46920HepG2RBM39
TWISTNBENSG00000105849.5417.13520529.58260-0.344302.244901.74760HepG2NELFE
TWISTNBENSG00000105849.5367.59800493.21820-0.424103.108802.46070HepG2RECQL
TWISTNBENSG00000105849.5346.06010501.93910-0.536503.278102.54440HepG2RPLP0
TWISTNBENSG00000105849.5427.31350303.834600.491902.186201.47890HepG2RRP9
TWISTNBENSG00000105849.5268.40160347.82660-0.374001.907201.35560HepG2SAFB2
TWISTNBENSG00000105849.5247.22760399.48190-0.692303.955202.79390HepG2SMNDC1
TWISTNBENSG00000105849.51038.55400657.196300.6601011.3765010.54810HepG2SRFBP1
TWISTNBENSG00000105849.5761.40450517.123100.558106.334605.69060HepG2SRSF1
TWISTNBENSG00000105849.5295.81420420.70050-0.508104.040703.39750HepG2SRSF9
TWISTNBENSG00000105849.5259.35080396.44680-0.612203.405802.66510HepG2SUPV3L1
TWISTNBENSG00000105849.5435.03140596.80710-0.456102.866902.13050HepG2TARDBP
TWISTNBENSG00000105849.5151.11780379.59270-1.3288010.676609.80440HepG2TIAL1
TWISTNBENSG00000105849.5221.78810382.89060-0.787805.287704.55960HepG2TRIM56
TWISTNBENSG00000105849.5394.92850533.43680-0.433702.816901.93670HepG2TUFM
TWISTNBENSG00000105849.5666.99720414.466900.686305.470304.60460HepG2U2AF1
TWISTNBENSG00000105849.5272.45720450.98350-0.727007.649306.58280HepG2UPF1
TWISTNBENSG00000105849.5221.64970362.96780-0.711603.416602.29460HepG2UPF2
TWISTNBENSG00000105849.5270.39190390.25900-0.529402.862802.12550HepG2XRN2
TWISTNBENSG00000105849.5252.34730391.58670-0.633903.390001.94480HepG2ZRANB2
TWISTNBENSG00000105849.51167.49970734.395000.668702.979801.74850K562AARS
TWISTNBENSG00000105849.51033.069402202.36050-1.0921021.7804018.82040K562ABCF1
TWISTNBENSG00000105849.5820.762801029.14560-0.326403.438202.36310K562BCLAF1
TWISTNBENSG00000105849.5812.400101265.04030-0.638906.783305.39890K562BOP1
TWISTNBENSG00000105849.5691.65160920.92920-0.413003.187901.79920K562CIRBP
TWISTNBENSG00000105849.5660.655501593.14720-1.2699012.4727010.24380K562CNOT7
TWISTNBENSG00000105849.5756.634401345.12650-0.8301014.3550012.53970K562CPSF6
TWISTNBENSG00000105849.5477.28330619.36050-0.375902.574901.57060K562DDX3X
TWISTNBENSG00000105849.52343.542301828.187600.358205.590604.71200K562DDX47
TWISTNBENSG00000105849.51019.87520736.298800.469904.112703.01570K562DKC1
TWISTNBENSG00000105849.5470.56350877.71960-0.899408.344606.68120K562EFTUD2
TWISTNBENSG00000105849.5535.41680680.27010-0.345402.999301.73200K562EIF2S1
TWISTNBENSG00000105849.5983.113901427.35200-0.537905.805604.82160K562EIF2S2
TWISTNBENSG00000105849.5679.76530939.95110-0.467502.815001.76960K562EIF3D
TWISTNBENSG00000105849.5925.93200748.348700.307102.456901.70580K562EIF3G
TWISTNBENSG00000105849.51193.953101583.01890-0.406903.755202.75660K562FIP1L1
TWISTNBENSG00000105849.51008.616001368.58450-0.440303.810202.80190K562FMR1
TWISTNBENSG00000105849.5788.730301159.97710-0.556502.709401.80430K562FTO
TWISTNBENSG00000105849.51165.52220672.914900.7924014.8170013.52960K562FXR1
TWISTNBENSG00000105849.5632.25070821.49110-0.377702.843401.39020K562G3BP1
TWISTNBENSG00000105849.51046.71110645.517600.697205.587204.50180K562G3BP2
TWISTNBENSG00000105849.5906.380901284.28540-0.502805.175404.09560K562GPKOW
TWISTNBENSG00000105849.51548.549101902.24510-0.296802.383301.68020K562GRSF1
TWISTNBENSG00000105849.5710.184401081.93610-0.607307.581305.88070K562HNRNPA1
TWISTNBENSG00000105849.5415.43010803.93070-0.952508.641307.63760K562HNRNPC
TWISTNBENSG00000105849.5511.59090717.75470-0.488503.532002.23160K562HNRNPF
TWISTNBENSG00000105849.51344.46460858.258700.647406.740704.74480K562HNRNPK
TWISTNBENSG00000105849.5773.171401301.99390-0.751908.028406.30970K562HNRNPM
TWISTNBENSG00000105849.5649.05810859.02650-0.404402.226901.33530K562IGF2BP2
TWISTNBENSG00000105849.5772.079301096.56560-0.506203.128702.12890K562KRR1
TWISTNBENSG00000105849.51132.83050903.047000.327002.705201.87560K562MAGOH
TWISTNBENSG00000105849.5652.068901253.59720-0.9430014.2806012.23060K562METAP2
TWISTNBENSG00000105849.5967.834601149.27910-0.247902.400801.64720K562MTPAP
TWISTNBENSG00000105849.5869.68200570.122800.609102.256501.47960K562NAA15
TWISTNBENSG00000105849.5942.512301277.05000-0.438205.656604.64520K562NSUN2
TWISTNBENSG00000105849.5581.28330784.76570-0.433002.768501.34520K562PHF6
TWISTNBENSG00000105849.51237.205001796.95050-0.538504.459203.38140K562PPIG
TWISTNBENSG00000105849.51250.49740854.117700.549905.454904.39900K562PRPF8
TWISTNBENSG00000105849.5458.45320720.76460-0.652804.771003.53990K562PSIP1
TWISTNBENSG00000105849.51125.11810877.348400.358803.187202.48040K562PTBP1
TWISTNBENSG00000105849.52970.577302216.610600.422304.967403.87740K562PUF60
TWISTNBENSG00000105849.51040.44600678.618800.616405.471704.73990K562PUS1
TWISTNBENSG00000105849.5935.21560661.067000.500405.082004.30050K562RBM15
TWISTNBENSG00000105849.5387.64980656.13130-0.759206.352803.64160K562RECQL
TWISTNBENSG00000105849.51141.95800870.145100.392102.710901.90350K562RPS19
TWISTNBENSG00000105849.5891.03670660.909100.430903.560802.32700K562SAFB
TWISTNBENSG00000105849.5601.40900812.20040-0.433503.319102.15030K562SRSF5
TWISTNBENSG00000105849.5732.93250919.38870-0.327003.041401.81080K562SRSF7
TWISTNBENSG00000105849.5768.563101420.28810-0.885904.742402.59780K562STIP1
TWISTNBENSG00000105849.5533.71320827.20300-0.632204.171502.90380K562SUPV3L1
TWISTNBENSG00000105849.51066.55110743.956700.519605.944204.73230K562SYNCRIP
TWISTNBENSG00000105849.5650.52370839.68250-0.368202.782701.96210K562TIA1
TWISTNBENSG00000105849.5417.20500693.28040-0.732705.546804.17880K562TIAL1
TWISTNBENSG00000105849.5463.55980736.28680-0.667505.885904.38910K562TRIM56
TWISTNBENSG00000105849.51380.724201852.14900-0.423803.719002.04700K562TRIP6
TWISTNBENSG00000105849.51151.550401425.95110-0.308302.577001.35690K562TROVE2
TWISTNBENSG00000105849.5865.61840626.299100.466803.180301.99630K562U2AF1
TWISTNBENSG00000105849.5568.40930875.37620-0.623003.934202.69720K562UCHL5
TWISTNBENSG00000105849.5988.601701354.07550-0.453802.891502.15690K562UPF1
TWISTNBENSG00000105849.5690.316001158.65220-0.747104.571703.43250K562WDR3
TWISTNBENSG00000105849.5981.232301894.48060-0.949106.851005.39590K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TWISTNB is not available on ENCORE database.





1 RBPs can affect the splicing of TWISTNB :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSTWISTNBENSG00000105849.5chr7-1974440119744582197444011974454319748385197487100.153000.000000.00000longerK562AQR
MXETWISTNBENSG00000105849.5chr7-19739694197399031974440119744572197350841973835019748385197487100.068000.000710.006751includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TWISTNB is not avaliable on ENCORE database.