TSPAN1

General Information

Gene Name       : TSPAN1
Gene ID             : ENSG00000117472.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TSPAN1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TSPAN1ENSG00000117472.90.000.200.10ENCSR000AEF
HepG2TSPAN1ENSG00000117472.92.002.642.32ENCSR985KAT
K562TSPAN1ENSG00000117472.90.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TSPAN1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on TSPAN1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for TSPAN1 is not avaliable on ENCORE database.






NO known proteins are bound to TSPAN1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for TSPAN1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TSPAN1 is not available on ENCORE database.

  • 86 RBPs can affect the levels of TSPAN1.  








The Knockdown/knockout RNA-Seq assay for TSPAN1 is not available on ENCORE database.





86 RBPs can affect the gene expression of TSPAN1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TSPAN1ENSG00000117472.5150.5186062.600701.265607.412906.51580HepG2ACO1
TSPAN1ENSG00000117472.57.4807059.81780-2.999309.233207.55340HepG2ADAR
TSPAN1ENSG00000117472.5105.9435054.297600.964202.558002.04510HepG2AKAP1
TSPAN1ENSG00000117472.5168.0737035.922502.2260014.7068012.53000HepG2AKAP8
TSPAN1ENSG00000117472.5116.1858050.503101.201903.456801.59960HepG2APOBEC3C
TSPAN1ENSG00000117472.5119.2422044.925801.408205.673504.57120HepG2ASCC1
TSPAN1ENSG00000117472.595.77180169.58440-0.824304.307703.48470HepG2AUH
TSPAN1ENSG00000117472.534.9340069.77080-0.998002.316101.76330HepG2BOP1
TSPAN1ENSG00000117472.585.8452045.572400.913502.332801.62040HepG2CALR
TSPAN1ENSG00000117472.589.3808041.054201.122303.235301.72580HepG2CSTF2T
TSPAN1ENSG00000117472.569.43260107.99590-0.637301.941601.30440HepG2DAZAP1
TSPAN1ENSG00000117472.529.3229057.89700-0.981502.443701.65550HepG2DDX19B
TSPAN1ENSG00000117472.586.9988044.143900.978702.716602.04360HepG2DDX21
TSPAN1ENSG00000117472.541.6920092.16940-1.144502.678301.40940HepG2DDX27
TSPAN1ENSG00000117472.5162.4909052.011001.643408.722207.66490HepG2DDX3X
TSPAN1ENSG00000117472.5365.4428098.507201.8912016.8943015.21700HepG2DDX55
TSPAN1ENSG00000117472.580.4021044.683200.847401.907201.38550HepG2DDX6
TSPAN1ENSG00000117472.531.6550059.69030-0.915102.233701.63550HepG2DNAJC2
TSPAN1ENSG00000117472.583.4333043.713600.932402.123401.31580HepG2EEF2
TSPAN1ENSG00000117472.5227.8920042.950402.4075020.2220018.71870HepG2EIF2S1
TSPAN1ENSG00000117472.516.8133047.46300-1.497203.122902.44480HepG2EIF4A3
TSPAN1ENSG00000117472.5135.57850194.70650-0.522202.268401.71550HepG2ETF1
TSPAN1ENSG00000117472.510.3925061.17260-2.557408.266906.83490HepG2EWSR1
TSPAN1ENSG00000117472.5283.3197047.068402.5895014.9680013.41360HepG2FIP1L1
TSPAN1ENSG00000117472.5170.99430101.054500.758703.091601.34930HepG2FMR1
TSPAN1ENSG00000117472.511.1215064.16410-2.528405.092103.72300HepG2FTO
TSPAN1ENSG00000117472.5161.0674040.126002.0050011.733609.66420HepG2FUS
TSPAN1ENSG00000117472.5115.2168047.895001.266304.615303.73870HepG2FXR1
TSPAN1ENSG00000117472.5108.9261044.426101.293804.844103.97460HepG2G3BP1
TSPAN1ENSG00000117472.5285.6210061.591502.213206.417804.84330HepG2GNB2L1
TSPAN1ENSG00000117472.518.3494050.06110-1.448003.016901.85350HepG2GRSF1
TSPAN1ENSG00000117472.599.2301059.766100.731302.360901.45250HepG2HDGF
TSPAN1ENSG00000117472.59.8882060.81940-2.620707.056006.09570HepG2HNRNPA1
TSPAN1ENSG00000117472.575.00010228.96320-1.6102014.4361012.97170HepG2HNRNPF
TSPAN1ENSG00000117472.514.3689044.99370-1.646803.002302.27610HepG2HNRNPK
TSPAN1ENSG00000117472.525.9665098.36900-1.921508.580807.45650HepG2HNRNPL
TSPAN1ENSG00000117472.535.3935069.28970-0.969202.088201.53330HepG2HNRNPLL
TSPAN1ENSG00000117472.5106.4458032.472501.712707.401205.95900HepG2HNRNPM
TSPAN1ENSG00000117472.5188.1915067.196901.4856011.3413010.18430HepG2HNRNPU
TSPAN1ENSG00000117472.570.40460225.46570-1.6792013.7934012.30540HepG2IGF2BP1
TSPAN1ENSG00000117472.5103.7308052.721000.976302.861901.51290HepG2ILF3
TSPAN1ENSG00000117472.5125.0382054.505701.197804.575802.48530HepG2CCAR2
TSPAN1ENSG00000117472.5120.6081060.381500.998003.184901.96740HepG2LARP7
TSPAN1ENSG00000117472.5367.8999038.089803.2717042.8601040.35740HepG2MSI2
TSPAN1ENSG00000117472.5198.9171049.312802.0120013.6729012.33250HepG2NCBP2
TSPAN1ENSG00000117472.522.7659061.44020-1.432303.095402.30550HepG2NSUN2
TSPAN1ENSG00000117472.5236.4680043.912102.4289015.6379013.97250HepG2PABPC4
TSPAN1ENSG00000117472.5112.0343059.532800.912103.348101.44390HepG2PES1
TSPAN1ENSG00000117472.526.6589059.93540-1.168802.972702.21190HepG2PPIL4
TSPAN1ENSG00000117472.523.8032079.49050-1.739606.442305.31690HepG2PRPF4
TSPAN1ENSG00000117472.5324.3909043.672702.8928043.1251041.51360HepG2PTBP1
TSPAN1ENSG00000117472.5195.59770102.232900.935905.175104.39180HepG2PUF60
TSPAN1ENSG00000117472.551.59440108.53230-1.072804.167203.47140HepG2PUM1
TSPAN1ENSG00000117472.5148.2677063.763001.217306.871805.97630HepG2PUS1
TSPAN1ENSG00000117472.594.9481036.655901.373003.725602.91150HepG2RAVER1
TSPAN1ENSG00000117472.588.53720162.73840-0.878203.756503.17710HepG2RBM22
TSPAN1ENSG00000117472.5103.9175042.926301.275404.764503.90100HepG2RBM25
TSPAN1ENSG00000117472.5139.3433048.603301.519407.514206.70020HepG2NELFE
TSPAN1ENSG00000117472.5108.07360246.61470-1.190208.189407.11240HepG2RPLP0
TSPAN1ENSG00000117472.5105.6447034.529301.613206.520505.62110HepG2RPS19
TSPAN1ENSG00000117472.5151.1653067.144601.170704.478403.47360HepG2RPS2
TSPAN1ENSG00000117472.533.9516075.16900-1.146702.663301.89040HepG2RRP9
TSPAN1ENSG00000117472.519.1204051.12270-1.418903.068001.69140HepG2SART3
TSPAN1ENSG00000117472.578.9571034.659001.187703.182202.17200HepG2SERBP1
TSPAN1ENSG00000117472.53.3789068.58180-4.3432013.5135012.07510HepG2SF3B1
TSPAN1ENSG00000117472.580.3833045.468500.821902.006101.48960HepG2SF3B4
TSPAN1ENSG00000117472.553.2061098.04090-0.881802.722802.02600HepG2SLBP
TSPAN1ENSG00000117472.5148.0564069.796901.084805.728204.85560HepG2SMN1
TSPAN1ENSG00000117472.5145.7867076.309700.933802.723301.94800HepG2SNRNP70
TSPAN1ENSG00000117472.5124.72100183.80670-0.559502.235201.76920HepG2SRFBP1
TSPAN1ENSG00000117472.541.3955093.82270-1.180503.415501.60300HepG2SRP68
TSPAN1ENSG00000117472.5139.1809047.459401.552107.843907.14210HepG2SRSF1
TSPAN1ENSG00000117472.5213.67770100.949101.081707.851106.86780HepG2SRSF5
TSPAN1ENSG00000117472.561.66280224.94070-1.8671017.3541015.87510HepG2SRSF7
TSPAN1ENSG00000117472.5104.6791031.434701.735407.127405.26080HepG2STAU1
TSPAN1ENSG00000117472.5431.4866098.062102.1374022.5969021.00210HepG2SUPV3L1
TSPAN1ENSG00000117472.5169.9319042.658901.9939014.7632013.62090HepG2TAF15
TSPAN1ENSG00000117472.598.2422038.277101.359803.745802.51140HepG2TBRG4
TSPAN1ENSG00000117472.5118.3241039.197201.593808.163406.73930HepG2TIA1
TSPAN1ENSG00000117472.512.7039040.26150-1.664102.472901.87660HepG2U2AF1
TSPAN1ENSG00000117472.52.2652057.92810-4.6766013.4438011.79760HepG2UCHL5
TSPAN1ENSG00000117472.550.6914018.193001.478303.552002.77690HepG2UPF1
TSPAN1ENSG00000117472.534.3677089.79400-1.385603.870602.67060HepG2UPF2
TSPAN1ENSG00000117472.5104.6545040.312301.376205.082903.67440HepG2XRCC6
TSPAN1ENSG00000117472.555.1444096.53140-0.807801.950901.33440HepG2XRN2
TSPAN1ENSG00000117472.594.5486020.008502.2403011.0293010.11650HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TSPAN1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TSPAN1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TSPAN1 is not avaliable on ENCORE database.