The Knockdown/knockout RNA-Seq assay for TRABD is not available on ENCORE database.
98 RBPs can affect the gene expression of TRABD :
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
TRABD | ENSG00000170638.5 | 476.80930 | 304.05080 | 0.64900 | 2.73730 | 2.14200 | HepG2 | BOP1 | |
TRABD | ENSG00000170638.5 | 164.90850 | 305.70530 | -0.89050 | 2.61730 | 1.86670 | HepG2 | CALR | |
TRABD | ENSG00000170638.5 | 255.13070 | 136.92980 | 0.89770 | 6.42100 | 4.87380 | HepG2 | YBX3 | |
TRABD | ENSG00000170638.5 | 330.79070 | 254.17100 | 0.38000 | 2.12750 | 1.55200 | HepG2 | CELF1 | |
TRABD | ENSG00000170638.5 | 385.83070 | 273.26200 | 0.49760 | 3.94410 | 3.08400 | HepG2 | DAZAP1 | |
TRABD | ENSG00000170638.5 | 120.20540 | 248.73850 | -1.04910 | 2.20150 | 1.39770 | HepG2 | DDX24 | |
TRABD | ENSG00000170638.5 | 604.77020 | 798.94930 | -0.40170 | 2.85640 | 1.54420 | HepG2 | DDX47 | |
TRABD | ENSG00000170638.5 | 241.72040 | 134.44760 | 0.84620 | 3.03340 | 2.30220 | HepG2 | DNAJC21 | |
TRABD | ENSG00000170638.5 | 326.23320 | 133.27080 | 1.29140 | 16.20630 | 14.75600 | HepG2 | DNAJC2 | |
TRABD | ENSG00000170638.5 | 101.46250 | 234.01630 | -1.20570 | 2.62290 | 1.54850 | HepG2 | AGO1 | |
TRABD | ENSG00000170638.5 | 377.20330 | 258.27270 | 0.54630 | 2.74200 | 1.93040 | HepG2 | EIF4G2 | |
TRABD | ENSG00000170638.5 | 698.28150 | 907.36090 | -0.37790 | 2.84280 | 2.23490 | HepG2 | ETF1 | |
TRABD | ENSG00000170638.5 | 311.35250 | 464.08450 | -0.57580 | 3.97440 | 3.03990 | HepG2 | FUBP3 | |
TRABD | ENSG00000170638.5 | 637.26040 | 412.08920 | 0.62880 | 2.80550 | 2.10810 | HepG2 | FXR1 | |
TRABD | ENSG00000170638.5 | 484.80540 | 321.41140 | 0.59290 | 5.32150 | 4.36720 | HepG2 | HNRNPF | |
TRABD | ENSG00000170638.5 | 653.20460 | 387.32280 | 0.75390 | 5.14230 | 4.21230 | HepG2 | HNRNPK | |
TRABD | ENSG00000170638.5 | 563.14420 | 248.91040 | 1.17780 | 21.53940 | 19.83400 | HepG2 | HNRNPL | |
TRABD | ENSG00000170638.5 | 288.59150 | 149.98590 | 0.94410 | 5.25350 | 4.43940 | HepG2 | HNRNPU | |
TRABD | ENSG00000170638.5 | 448.69330 | 316.49610 | 0.50340 | 3.40550 | 2.60840 | HepG2 | IGF2BP1 | |
TRABD | ENSG00000170638.5 | 288.38280 | 153.20500 | 0.91240 | 8.49040 | 7.27540 | HepG2 | ILF2 | |
TRABD | ENSG00000170638.5 | 630.27780 | 412.23460 | 0.61240 | 2.43110 | 1.81550 | HepG2 | MAGOH | |
TRABD | ENSG00000170638.5 | 722.99530 | 414.48650 | 0.80260 | 4.08570 | 3.33370 | HepG2 | MATR3 | |
TRABD | ENSG00000170638.5 | 387.88100 | 538.88530 | -0.47440 | 2.82280 | 2.00630 | HepG2 | MSI2 | |
TRABD | ENSG00000170638.5 | 298.75800 | 452.57280 | -0.59920 | 3.79570 | 2.37120 | HepG2 | NAA15 | |
TRABD | ENSG00000170638.5 | 664.50290 | 424.20500 | 0.64740 | 3.49660 | 2.78890 | HepG2 | NCBP2 | |
TRABD | ENSG00000170638.5 | 609.87920 | 270.96790 | 1.17030 | 6.04660 | 4.92070 | HepG2 | NOL12 | |
TRABD | ENSG00000170638.5 | 266.77410 | 128.59800 | 1.05270 | 2.92640 | 1.43410 | HepG2 | NOLC1 | |
TRABD | ENSG00000170638.5 | 434.20760 | 218.55760 | 0.99030 | 2.68580 | 1.60860 | HepG2 | NONO | |
TRABD | ENSG00000170638.5 | 235.95770 | 377.57560 | -0.67820 | 1.91560 | 1.30560 | HepG2 | PABPC4 | |
TRABD | ENSG00000170638.5 | 665.60900 | 412.57220 | 0.68990 | 8.94600 | 7.95630 | HepG2 | PCBP1 | |
TRABD | ENSG00000170638.5 | 430.30820 | 133.77480 | 1.68550 | 5.06080 | 4.09190 | HepG2 | PPIL4 | |
TRABD | ENSG00000170638.5 | 261.63840 | 384.28570 | -0.55460 | 4.34940 | 3.40390 | HepG2 | PRPF4 | |
TRABD | ENSG00000170638.5 | 442.08610 | 258.67200 | 0.77310 | 6.67040 | 5.79820 | HepG2 | PUF60 | |
TRABD | ENSG00000170638.5 | 655.40520 | 274.60290 | 1.25490 | 28.29820 | 26.80130 | HepG2 | PUM1 | |
TRABD | ENSG00000170638.5 | 514.15610 | 274.39540 | 0.90590 | 5.50310 | 4.57270 | HepG2 | PUM2 | |
TRABD | ENSG00000170638.5 | 564.37300 | 690.85410 | -0.29170 | 2.42260 | 1.83580 | HepG2 | PUS1 | |
TRABD | ENSG00000170638.5 | 350.51470 | 454.66010 | -0.37530 | 2.15940 | 1.59560 | HepG2 | QKI | |
TRABD | ENSG00000170638.5 | 553.45870 | 758.36740 | -0.45440 | 3.88850 | 3.30190 | HepG2 | RBM22 | |
TRABD | ENSG00000170638.5 | 500.04270 | 234.24560 | 1.09390 | 4.80660 | 3.48000 | HepG2 | RBM27 | |
TRABD | ENSG00000170638.5 | 535.24360 | 435.14200 | 0.29860 | 1.85500 | 1.33570 | HepG2 | RECQL | |
TRABD | ENSG00000170638.5 | 398.75830 | 215.99240 | 0.88440 | 2.99780 | 2.16580 | HepG2 | RPS2 | |
TRABD | ENSG00000170638.5 | 483.90480 | 133.56700 | 1.85710 | 36.76350 | 34.82560 | HepG2 | SAFB2 | |
TRABD | ENSG00000170638.5 | 576.43150 | 437.07250 | 0.39920 | 2.98440 | 2.37420 | HepG2 | SF3B4 | |
TRABD | ENSG00000170638.5 | 578.60980 | 248.04890 | 1.22190 | 23.10330 | 21.46690 | HepG2 | SLBP | |
TRABD | ENSG00000170638.5 | 289.87530 | 155.75830 | 0.89600 | 7.75840 | 6.76670 | HepG2 | SMN1 | |
TRABD | ENSG00000170638.5 | 425.61590 | 182.43790 | 1.22200 | 4.97950 | 3.66300 | HepG2 | SMNDC1 | |
TRABD | ENSG00000170638.5 | 249.96230 | 456.21050 | -0.86800 | 9.02670 | 8.28230 | HepG2 | SRSF1 | |
TRABD | ENSG00000170638.5 | 463.72470 | 255.41430 | 0.86030 | 10.12030 | 9.02460 | HepG2 | SRSF5 | |
TRABD | ENSG00000170638.5 | 423.36730 | 315.78440 | 0.42290 | 2.18460 | 1.55760 | HepG2 | SRSF7 | |
TRABD | ENSG00000170638.5 | 263.98080 | 371.15280 | -0.49160 | 3.47560 | 2.87260 | HepG2 | SRSF9 | |
TRABD | ENSG00000170638.5 | 491.15610 | 743.60170 | -0.59830 | 6.21720 | 5.50490 | HepG2 | SSB | |
TRABD | ENSG00000170638.5 | 436.02190 | 202.81670 | 1.10410 | 2.34130 | 1.34290 | HepG2 | STIP1 | |
TRABD | ENSG00000170638.5 | 592.17410 | 290.46500 | 1.02760 | 16.77630 | 15.45170 | HepG2 | SUCLG1 | |
TRABD | ENSG00000170638.5 | 149.32010 | 410.06370 | -1.45740 | 18.83310 | 17.55950 | HepG2 | TAF15 | |
TRABD | ENSG00000170638.5 | 273.65670 | 376.78850 | -0.46140 | 2.14020 | 1.40340 | HepG2 | TIA1 | |
TRABD | ENSG00000170638.5 | 253.23390 | 145.72630 | 0.79710 | 4.95800 | 4.32860 | HepG2 | TIAL1 | |
TRABD | ENSG00000170638.5 | 514.57210 | 147.04300 | 1.80700 | 36.80190 | 35.04320 | HepG2 | TRIM56 | |
TRABD | ENSG00000170638.5 | 591.57080 | 252.72970 | 1.22690 | 4.14660 | 3.05210 | HepG2 | TUFM | |
TRABD | ENSG00000170638.5 | 337.94150 | 569.72100 | -0.75350 | 3.30370 | 2.62230 | HepG2 | U2AF1 | |
TRABD | ENSG00000170638.5 | 660.93750 | 267.52240 | 1.30480 | 3.66220 | 2.69230 | HepG2 | UBE2L3 | |
TRABD | ENSG00000170638.5 | 276.63800 | 139.71070 | 0.98550 | 2.60630 | 1.87090 | HepG2 | UCHL5 | |
TRABD | ENSG00000170638.5 | 481.98520 | 591.99450 | -0.29660 | 2.11280 | 1.48830 | HepG2 | UPF1 | |
TRABD | ENSG00000170638.5 | 444.50630 | 232.90270 | 0.93240 | 2.44190 | 1.75660 | HepG2 | XRN2 | |
TRABD | ENSG00000170638.5 | 211.41180 | 379.23320 | -0.84300 | 8.55390 | 7.48210 | HepG2 | ZC3H8 | |
TRABD | ENSG00000170638.5 | 394.15500 | 651.08020 | -0.72410 | 10.96490 | 10.05410 | HepG2 | ZNF622 | |
TRABD | ENSG00000170638.5 | 349.74340 | 178.16970 | 0.97290 | 2.87160 | 1.54810 | HepG2 | ZRANB2 | |
TRABD | ENSG00000170638.5 | 1804.65260 | 931.40510 | 0.95410 | 13.88170 | 12.71360 | K562 | AGGF1 | |
TRABD | ENSG00000170638.5 | 1652.61340 | 1023.63200 | 0.69100 | 4.33340 | 3.04410 | K562 | AKAP8 | |
TRABD | ENSG00000170638.5 | 1827.02040 | 969.20830 | 0.91450 | 7.30990 | 6.20230 | K562 | AKAP8L | |
TRABD | ENSG00000170638.5 | 644.04880 | 1093.35110 | -0.76350 | 7.75760 | 6.85720 | K562 | AQR | |
TRABD | ENSG00000170638.5 | 1492.51490 | 1017.00650 | 0.55330 | 4.04400 | 2.92070 | K562 | ATP5C1 | |
TRABD | ENSG00000170638.5 | 614.47740 | 339.23880 | 0.85700 | 11.26150 | 9.30720 | K562 | BCLAF1 | |
TRABD | ENSG00000170638.5 | 706.07910 | 405.12520 | 0.80140 | 8.52430 | 6.38970 | K562 | CCAR1 | |
TRABD | ENSG00000170638.5 | 328.78080 | 234.62800 | 0.48670 | 2.54920 | 1.32200 | K562 | CIRBP | |
TRABD | ENSG00000170638.5 | 555.30480 | 257.36340 | 1.10940 | 3.08050 | 1.95970 | K562 | CSTF2 | |
TRABD | ENSG00000170638.5 | 869.81650 | 634.81480 | 0.45430 | 4.48240 | 3.59410 | K562 | EIF2S2 | |
TRABD | ENSG00000170638.5 | 233.26550 | 147.72600 | 0.65890 | 3.54730 | 2.65330 | K562 | EIF3G | |
TRABD | ENSG00000170638.5 | 796.86240 | 606.65150 | 0.39340 | 3.50780 | 2.18070 | K562 | EIF4B | |
TRABD | ENSG00000170638.5 | 677.82050 | 441.81030 | 0.61740 | 3.66570 | 2.67960 | K562 | FIP1L1 | |
TRABD | ENSG00000170638.5 | 541.40940 | 700.60300 | -0.37190 | 1.95610 | 1.43010 | K562 | FXR1 | |
TRABD | ENSG00000170638.5 | 25.99110 | 96.68660 | -1.89530 | 7.47670 | 6.19650 | K562 | G3BP2 | |
TRABD | ENSG00000170638.5 | 1249.79470 | 845.89750 | 0.56300 | 5.36680 | 4.30900 | K562 | GRSF1 | |
TRABD | ENSG00000170638.5 | 616.28490 | 218.94600 | 1.49290 | 5.25370 | 3.65470 | K562 | IGF2BP2 | |
TRABD | ENSG00000170638.5 | 383.20010 | 222.68610 | 0.78300 | 4.54220 | 2.93070 | K562 | IGF2BP3 | |
TRABD | ENSG00000170638.5 | 488.64890 | 230.07490 | 1.08660 | 8.56680 | 7.04760 | K562 | MAGOH | |
TRABD | ENSG00000170638.5 | 1427.85040 | 984.57670 | 0.53620 | 3.89940 | 2.55160 | K562 | MAK16 | |
TRABD | ENSG00000170638.5 | 351.37420 | 229.60380 | 0.61380 | 4.28730 | 3.11760 | K562 | MATR3 | |
TRABD | ENSG00000170638.5 | 1843.89240 | 1152.12660 | 0.67840 | 5.68150 | 4.28940 | K562 | MBNL1 | |
TRABD | ENSG00000170638.5 | 418.07500 | 672.78510 | -0.68640 | 4.02560 | 2.52560 | K562 | NCBP2 | |
TRABD | ENSG00000170638.5 | 493.82600 | 239.80620 | 1.04200 | 2.95530 | 1.60570 | K562 | NONO | |
TRABD | ENSG00000170638.5 | 370.15280 | 224.91110 | 0.71870 | 5.48150 | 3.52490 | K562 | PCBP1 | |
TRABD | ENSG00000170638.5 | 340.20780 | 516.55540 | -0.60250 | 4.27090 | 3.27180 | K562 | POLR2G | |
TRABD | ENSG00000170638.5 | 839.09630 | 501.60860 | 0.74220 | 5.09090 | 3.92060 | K562 | PPIG | |
TRABD | ENSG00000170638.5 | 483.87100 | 223.53430 | 1.11400 | 14.19670 | 12.75550 | K562 | PTBP1 | |
TRABD | ENSG00000170638.5 | 942.82230 | 1322.53920 | -0.48830 | 2.37980 | 1.39640 | K562 | PUM1 | |
TRABD | ENSG00000170638.5 | 1659.11410 | 960.90970 | 0.78780 | 8.87100 | 7.94680 | K562 | PUS1 | |
TRABD | ENSG00000170638.5 | 40.29550 | 92.23670 | -1.19470 | 2.94550 | 1.47670 | K562 | RAVER1 | |
TRABD | ENSG00000170638.5 | 1767.96930 | 936.49290 | 0.91670 | 11.09450 | 9.92900 | K562 | RBM15 | |
TRABD | ENSG00000170638.5 | 331.99700 | 214.32700 | 0.63130 | 4.01790 | 2.98730 | K562 | RBM22 | |
TRABD | ENSG00000170638.5 | 429.11560 | 275.73060 | 0.63800 | 3.49740 | 2.36030 | K562 | RPS3 | |
TRABD | ENSG00000170638.5 | 789.82160 | 1068.43860 | -0.43590 | 5.20580 | 4.11270 | K562 | SF3A3 | |
TRABD | ENSG00000170638.5 | 185.14310 | 100.47330 | 0.88170 | 4.96400 | 3.80390 | K562 | SF3B4 | |
TRABD | ENSG00000170638.5 | 67.15600 | 135.64800 | -1.01430 | 4.18510 | 2.12240 | K562 | SND1 | |
TRABD | ENSG00000170638.5 | 410.01260 | 219.14140 | 0.90370 | 8.19800 | 6.99040 | K562 | SRSF1 | |
TRABD | ENSG00000170638.5 | 556.19420 | 266.17730 | 1.06310 | 11.65920 | 9.35620 | K562 | SRSF4 | |
TRABD | ENSG00000170638.5 | 498.43300 | 206.97050 | 1.26790 | 15.84960 | 13.21430 | K562 | SRSF5 | |
TRABD | ENSG00000170638.5 | 368.49040 | 518.16260 | -0.49180 | 2.20940 | 1.47440 | K562 | SYNCRIP | |
TRABD | ENSG00000170638.5 | 30.54480 | 94.90400 | -1.63550 | 5.37380 | 3.05410 | K562 | TAF15 | |
TRABD | ENSG00000170638.5 | 665.40610 | 221.77840 | 1.58500 | 5.35650 | 4.35430 | K562 | TARDBP | |
TRABD | ENSG00000170638.5 | 613.59750 | 213.93220 | 1.52000 | 24.52190 | 21.90780 | K562 | TIA1 | |
TRABD | ENSG00000170638.5 | 542.07660 | 209.94750 | 1.36840 | 8.61650 | 6.37860 | K562 | TRA2A | |
TRABD | ENSG00000170638.5 | 44.23170 | 93.64900 | -1.08220 | 3.32180 | 2.10000 | K562 | U2AF1 | |
TRABD | ENSG00000170638.5 | 44.11040 | 96.74250 | -1.13300 | 4.11900 | 3.14030 | K562 | U2AF2 | |
TRABD | ENSG00000170638.5 | 511.98540 | 246.60130 | 1.05380 | 3.40860 | 2.02090 | K562 | XRN2 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for TRABD is not available on ENCORE database.
8 RBPs can affect the splicing of TRABD :
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
SE | TRABD | ENSG00000170638.5 | chr22 | + | 50631455 | 50631522 | | | 50624343 | 50624405 | 50632004 | 50632083 | -0.09400 | 0.00458 | 0.04325 | excluded | K562 | AQR | |
SE | TRABD | ENSG00000170638.5 | chr22 | + | 50636251 | 50636424 | | | 50635877 | 50636017 | 50636503 | 50636615 | -0.06800 | 0.00020 | 0.00778 | excluded | K562 | RBM15 | |
SE | TRABD | ENSG00000170638.5 | chr22 | + | 50636251 | 50636316 | | | 50635865 | 50636017 | 50636503 | 50636615 | -0.11700 | 0.00103 | 0.02846 | excluded | K562 | AGGF1 | |
A3SS | TRABD | ENSG00000170638.5 | chr22 | + | 50636251 | 50636615 | | | 50636503 | 50636615 | 50635865 | 50636017 | -0.09600 | 0.00008 | 0.01276 | shorter | K562 | RBM15 | |
RI | TRABD | ENSG00000170638.5 | chr22 | + | 50636251 | 50636615 | | | 50636251 | 50636424 | 50636503 | 50636615 | 0.11200 | 0.01619 | 0.08481 | included | K562 | PUS1 | |
RI | TRABD | ENSG00000170638.5 | chr22 | + | 50636251 | 50636615 | | | 50636251 | 50636424 | 50636503 | 50636615 | 0.12000 | 0.00728 | 0.06734 | included | HepG2 | SF3A3 | |
RI | TRABD | ENSG00000170638.5 | chr22 | + | 50636251 | 50636615 | | | 50636251 | 50636424 | 50636503 | 50636615 | 0.46500 | 0.00000 | 0.00000 | included | HepG2 | U2AF2 | |
RI | TRABD | ENSG00000170638.5 | chr22 | + | 50636251 | 50636615 | | | 50636251 | 50636424 | 50636503 | 50636615 | 0.30700 | 0.00000 | 0.00002 | included | HepG2 | U2AF1 | |
RI | TRABD | ENSG00000170638.5 | chr22 | + | 50636251 | 50636615 | | | 50636251 | 50636424 | 50636503 | 50636615 | 0.44700 | 0.00007 | 0.00238 | included | HepG2 | FUBP3 | |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for TRABD is not avaliable on ENCORE database.