TERF1

General Information

Gene Name       : TERF1
Gene ID             : ENSG00000147601.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TERF1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TERF1ENSG00000147601.1315.6112.4314.02ENCSR000AEF
HepG2TERF1ENSG00000147601.1310.5319.7515.14ENCSR985KAT
K562TERF1ENSG00000147601.1314.5315.8315.18ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TERF1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TERF1 RNA is bound by 6 proteins.  







eCLIP assay for TERF1 is not avaliable on ENCORE database.





6 proteins are bound to TERF1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr87395842873958482+3'-UTR3.473064.08064K562KHSRP
chr87395829473958387+3'-UTR,CDS4.215073.45943HepG2BCLAF1
chr87393445573934542+CDS,intron-Proximal4.480334.37348HepG2BCLAF1
chr87392113373921314+CDS3.308863.80299HepG2GRWD1
chr87393937173939470+intron-Distal,intron-Proximal4.119494.02395HepG2KHSRP
chr87393989273939952+intron-Distal3.985843.79098HepG2SUGP2
chr87394326573943360+intron-Distal4.021133.60944K562TARDBP
chr87393936973939467+intron-Distal,intron-Proximal4.631304.96658K562KHSRP
chr87393574173935827+intron-Distal4.411833.37054HepG2XPO5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TERF1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TERF1 is not available on ENCORE database.

  • 92 RBPs can affect the levels of TERF1.  








The Knockdown/knockout RNA-Seq assay for TERF1 is not available on ENCORE database.





92 RBPs can affect the gene expression of TERF1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TERF1ENSG00000147601.9463.37290642.78810-0.472202.910502.10690HepG2ASCC1
TERF1ENSG00000147601.9529.66400727.98340-0.458804.603503.75700HepG2AUH
TERF1ENSG00000147601.9496.99950748.91060-0.591505.134204.35000HepG2BOP1
TERF1ENSG00000147601.9285.36470506.68840-0.8283010.994809.84870HepG2CKAP4
TERF1ENSG00000147601.9220.36490687.54990-1.6416025.3596023.54320HepG2CPSF6
TERF1ENSG00000147601.9342.95400443.42020-0.370702.319401.38870HepG2YBX3
TERF1ENSG00000147601.9573.77490725.14230-0.337803.373702.56980HepG2DAZAP1
TERF1ENSG00000147601.9248.88030415.02560-0.737705.692704.75640HepG2DDX21
TERF1ENSG00000147601.9529.10400405.927000.382202.232501.42230HepG2DDX24
TERF1ENSG00000147601.9284.96860438.99090-0.623403.274802.44400HepG2DDX55
TERF1ENSG00000147601.9406.36950639.20620-0.653504.522103.74900HepG2DDX6
TERF1ENSG00000147601.9311.04680435.36680-0.485103.516902.73090HepG2DNAJC21
TERF1ENSG00000147601.9289.58430431.57860-0.575604.100403.33730HepG2DNAJC2
TERF1ENSG00000147601.9131.32410614.55080-2.2264036.0959034.11370HepG2EIF2S1
TERF1ENSG00000147601.9343.10620679.18290-0.985109.518308.34260HepG2EIF4A3
TERF1ENSG00000147601.9458.98770661.21860-0.526702.697502.01690HepG2EIF4B
TERF1ENSG00000147601.9575.14580715.31140-0.314602.785601.94560HepG2EIF4G1
TERF1ENSG00000147601.9455.90160685.23800-0.587905.052503.97190HepG2EIF4G2
TERF1ENSG00000147601.9379.50240635.64670-0.744106.010705.04660HepG2G3BP1
TERF1ENSG00000147601.9490.19530779.41680-0.669005.273604.40810HepG2GPKOW
TERF1ENSG00000147601.9482.13710666.37840-0.466904.738703.56710HepG2HNRNPA2B1
TERF1ENSG00000147601.9416.20310542.99900-0.383702.774102.05620HepG2HNRNPF
TERF1ENSG00000147601.9455.40010643.53060-0.498903.368102.60040HepG2HNRNPK
TERF1ENSG00000147601.9474.47620660.57940-0.477405.673104.73870HepG2HNRNPL
TERF1ENSG00000147601.9214.21980485.68990-1.1809018.1040016.65420HepG2HNRNPU
TERF1ENSG00000147601.9388.31140534.70230-0.461503.258302.47770HepG2IGF2BP1
TERF1ENSG00000147601.9326.32160646.13920-0.985609.995708.79740HepG2IGF2BP2
TERF1ENSG00000147601.9356.67360496.11300-0.476104.589803.66560HepG2ILF2
TERF1ENSG00000147601.9452.61460649.87160-0.521902.793001.78640HepG2KHSRP
TERF1ENSG00000147601.9636.54760926.68440-0.541803.458502.52910HepG2LARP4
TERF1ENSG00000147601.9457.35890685.40870-0.583604.215903.40910HepG2MAGOH
TERF1ENSG00000147601.9364.16770574.70330-0.658202.289901.55140HepG2MSI2
TERF1ENSG00000147601.9395.75340705.50950-0.834107.486106.46800HepG2NCBP2
TERF1ENSG00000147601.9265.32220504.02580-0.925804.747202.88030HepG2NKRF
TERF1ENSG00000147601.9512.41660719.04430-0.488804.467203.49930HepG2NOL12
TERF1ENSG00000147601.9383.09170628.36120-0.713905.743704.71660HepG2PABPC4
TERF1ENSG00000147601.9461.64320591.31180-0.357102.182401.63280HepG2PCBP1
TERF1ENSG00000147601.9316.03920430.90920-0.447303.367502.52140HepG2PRPF4
TERF1ENSG00000147601.9412.55900601.64880-0.544305.207404.50570HepG2PTBP1
TERF1ENSG00000147601.9514.16240728.57220-0.502806.751705.91000HepG2PUM1
TERF1ENSG00000147601.9535.29040728.06020-0.443703.940603.14350HepG2PUM2
TERF1ENSG00000147601.9419.31610516.20420-0.299902.074501.52290HepG2PUS1
TERF1ENSG00000147601.9453.85810651.67090-0.521904.809104.01920HepG2QKI
TERF1ENSG00000147601.9342.26510489.26170-0.515501.907701.31090HepG2RAVER1
TERF1ENSG00000147601.9434.30170675.21610-0.636706.562605.31170HepG2RBM15
TERF1ENSG00000147601.9495.75830698.58290-0.494804.664004.03660HepG2RBM22
TERF1ENSG00000147601.9367.27540600.27230-0.708805.565404.14440HepG2RBM27
TERF1ENSG00000147601.9402.49920584.89390-0.539203.925003.13470HepG2RPLP0
TERF1ENSG00000147601.9241.99990370.52520-0.614603.787203.07850HepG2RPS19
TERF1ENSG00000147601.9370.65100553.63460-0.578903.773902.84310HepG2RPS2
TERF1ENSG00000147601.9270.43430432.51740-0.677506.592905.66210HepG2SAFB2
TERF1ENSG00000147601.9230.52760371.93670-0.690104.261103.10210HepG2SERBP1
TERF1ENSG00000147601.9417.45300736.23910-0.818608.550407.37360HepG2SF3B1
TERF1ENSG00000147601.9336.92800626.45330-0.8948012.2057011.10320HepG2SF3B4
TERF1ENSG00000147601.9506.63200658.04850-0.377303.683702.89310HepG2SLBP
TERF1ENSG00000147601.9383.58660504.36980-0.394903.213302.52860HepG2SMN1
TERF1ENSG00000147601.9465.76720789.02950-0.7605011.5290010.69540HepG2SRFBP1
TERF1ENSG00000147601.9893.79340653.857500.450904.754804.17760HepG2SRSF1
TERF1ENSG00000147601.9568.59940677.64460-0.253101.886401.35600HepG2SRSF5
TERF1ENSG00000147601.9408.21410533.46730-0.386102.866202.15890HepG2SRSF7
TERF1ENSG00000147601.9305.74880531.92710-0.7989010.406309.45470HepG2SRSF9
TERF1ENSG00000147601.9437.05500685.07450-0.648408.339107.54210HepG2SSB
TERF1ENSG00000147601.9240.33450437.01570-0.862605.630304.71810HepG2SUPV3L1
TERF1ENSG00000147601.9471.63800587.64550-0.317302.116001.61340HepG2TAF15
TERF1ENSG00000147601.9423.69420724.91680-0.774807.806306.66870HepG2TARDBP
TERF1ENSG00000147601.9211.29300471.86850-1.1591014.3958013.41300HepG2TIAL1
TERF1ENSG00000147601.9286.75300476.16180-0.731608.096707.21120HepG2TRIM56
TERF1ENSG00000147601.9526.68590670.49460-0.348302.365301.56330HepG2TUFM
TERF1ENSG00000147601.9388.44080592.55040-0.609206.920605.89870HepG2UPF1
TERF1ENSG00000147601.9518.72690651.69090-0.329202.942602.38430HepG2ZNF622
TERF1ENSG00000147601.9864.726501211.06300-0.486004.471102.88610K562ABCF1
TERF1ENSG00000147601.91172.69590866.895200.435805.799005.02560K562AGGF1
TERF1ENSG00000147601.9428.67370547.98640-0.354302.636101.70130K562BCLAF1
TERF1ENSG00000147601.9585.33380863.58370-0.561104.229703.14340K562BOP1
TERF1ENSG00000147601.9618.57290896.71600-0.535703.327901.72440K562CKAP4
TERF1ENSG00000147601.9815.651301287.68460-0.658803.890602.58960K562CNOT7
TERF1ENSG00000147601.9922.440401117.12980-0.276302.309101.30770K562CPEB4
TERF1ENSG00000147601.9384.76120918.28400-1.2550012.5522010.87160K562CPSF6
TERF1ENSG00000147601.91264.036801620.48170-0.358403.393302.31180K562CELF1
TERF1ENSG00000147601.9375.62100578.70130-0.623506.986205.01640K562EIF2S1
TERF1ENSG00000147601.9313.33950550.43740-0.812908.089706.68790K562EIF4A3
TERF1ENSG00000147601.9361.44990495.69430-0.455703.547302.21360K562EIF4B
TERF1ENSG00000147601.91019.440401318.05410-0.370603.726602.63840K562EIF4G2
TERF1ENSG00000147601.9715.33070934.24170-0.385202.254601.47970K562FMR1
TERF1ENSG00000147601.9486.41430876.77260-0.850005.446504.33750K562GPKOW
TERF1ENSG00000147601.9702.18210988.71300-0.493703.282902.46220K562GRSF1
TERF1ENSG00000147601.9376.36240576.11420-0.614204.770804.00750K562HNRNPC
TERF1ENSG00000147601.9792.604101044.50910-0.398202.799801.73690K562HNRNPL
TERF1ENSG00000147601.9459.13960765.80130-0.738007.126405.69220K562HNRNPU
TERF1ENSG00000147601.91250.63900957.290600.385503.154502.26960K562KIF1C
TERF1ENSG00000147601.9299.87160748.55640-1.3198013.5609011.35910K562KRR1
TERF1ENSG00000147601.9557.38710693.10190-0.314402.045601.31830K562MAGOH
TERF1ENSG00000147601.9589.38880855.81210-0.538103.763902.73170K562METAP2
TERF1ENSG00000147601.9597.55240768.91430-0.363803.476602.57410K562MTPAP
TERF1ENSG00000147601.9575.22370854.34990-0.570708.864407.63070K562NSUN2
TERF1ENSG00000147601.9770.48800988.13350-0.358902.490401.71660K562PPIG
TERF1ENSG00000147601.9543.14390407.974700.412802.290201.60510K562PRPF8
TERF1ENSG00000147601.91145.491401498.77430-0.387804.325303.11950K562PUM2
TERF1ENSG00000147601.91418.70970894.571500.665207.795806.93090K562PUS1
TERF1ENSG00000147601.91074.18860871.633300.301402.612102.03370K562RBM15
TERF1ENSG00000147601.9614.00900843.00000-0.457305.004803.93490K562SF3A3
TERF1ENSG00000147601.9583.44750833.70570-0.514902.957801.95150K562SF3B1
TERF1ENSG00000147601.9450.47550627.66500-0.478504.083903.03820K562SF3B4
TERF1ENSG00000147601.9691.23130863.66940-0.321303.153202.15950K562SRPK2
TERF1ENSG00000147601.9923.02680660.112800.483604.698803.78240K562SRSF1
TERF1ENSG00000147601.9376.91210531.64980-0.496202.910101.82100K562SRSF4
TERF1ENSG00000147601.9471.10750594.87200-0.336502.390001.30620K562SRSF7
TERF1ENSG00000147601.9252.14000395.03340-0.647703.706002.51400K562SUPV3L1
TERF1ENSG00000147601.9644.98600506.242700.349302.437601.66740K562SYNCRIP
TERF1ENSG00000147601.9660.57530905.88400-0.455605.388504.42220K562UPF1
TERF1ENSG00000147601.9604.54370893.89170-0.564304.370202.85040K562UTP3
TERF1ENSG00000147601.9890.609701171.22850-0.395203.336302.37750K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TERF1 is not available on ENCORE database.





18 RBPs can affect the splicing of TERF1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETERF1ENSG00000147601.9chr8+7394257073942630739391747393928773944276739443680.231000.000330.00841includedK562SRSF1
SETERF1ENSG00000147601.9chr8+739425707394263073939174739392877394427673944368-0.298000.000130.00733excludedK562PRPF8
SETERF1ENSG00000147601.9chr8+739425707394263073939174739392877394427673944368-0.177000.000140.00387excludedHepG2U2AF1
SETERF1ENSG00000147601.9chr8+739425707394263073939174739392877394427673944368-0.081000.000730.01077excludedHepG2U2AF2
SETERF1ENSG00000147601.9chr8+739425707394263073939174739392877394427673944368-0.257000.000040.00513excludedHepG2AKAP1
SETERF1ENSG00000147601.9chr8+7392509073925166739210987392144073926129739262250.103000.000090.00154includedK562AQR
SETERF1ENSG00000147601.9chr8+739425707394263073939174739392877394427673944368-0.091000.010220.08269excludedK562AQR
SETERF1ENSG00000147601.9chr8+7394257073942630739391747393928773944276739443680.128000.000030.01079includedK562DROSHA
SETERF1ENSG00000147601.9chr8+739425707394263073939174739392877394427673944368-0.279000.000080.00685excludedHepG2PTBP1
SETERF1ENSG00000147601.9chr8+7394257073942630739391747393928773944276739443680.150000.000020.01036includedK562LARP4
SETERF1ENSG00000147601.9chr8+739425707394263073939174739392877394427673944368-0.248000.000360.01932excludedHepG2MATR3
SETERF1ENSG00000147601.9chr8+739425707394263073939174739392877394427673944368-0.301000.000310.03234excludedHepG2DDX6
SETERF1ENSG00000147601.9chr8+7394257073942630739391747393928773944276739443680.277000.000420.05022includedHepG2LARP4
SETERF1ENSG00000147601.9chr8+7394257073942630739391747393928773944276739443680.144000.000010.00163includedK562HNRNPUL1
SETERF1ENSG00000147601.9chr8+7394257073942630739391747393928773944276739443680.180000.000070.05133includedK562PUM2
SETERF1ENSG00000147601.9chr8+7394257073942630739391747393928773944276739443680.180000.000110.02188includedHepG2RBFOX2
SETERF1ENSG00000147601.9chr8+7394257073942630739391747393928773944276739443680.227000.000000.00245includedK562EIF4G2
SETERF1ENSG00000147601.9chr8+7394257073942630739391747393928773944276739443680.227000.001830.05958includedK562TARDBP
SETERF1ENSG00000147601.9chr8+7392509073925166739210987392144073926129739262250.094000.002170.06802includedK562HNRNPU
SETERF1ENSG00000147601.9chr8+7394257073942630739391747393928773944276739443680.112000.000740.09780includedK562NPM1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TERF1 is not avaliable on ENCORE database.