SUV420H2

General Information

Gene Name       : SUV420H2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SUV420H2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SUV420H2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SUV420H2 RNA is bound by 26 proteins.  







eCLIP assay for SUV420H2 is not avaliable on ENCORE database.





26 proteins are bound to SUV420H2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr195585806355858102+3'-UTR,intron-Proximal6.0069813.28065K562AQR
chr195585805555858063+3'-UTR,intron-Proximal5.628629.95272K562AQR
chr195585790055857985+3'-UTR,CDS4.822818.07779K562YBX3
chr195585827655858337+3'-UTR,CDS,intron-Proximal4.104599.78274K562AQR
chr195585764555857718+3'-UTR,CDS,intron-Proximal3.984066.98305HepG2PPIG
chr195585907855859125+3'-UTR4.712164.22122K562DDX55
chr195585757455857631+3'-UTR,CDS,intron-Proximal3.0969811.01080K562BUD13
chr195585759255857716+3'-UTR,CDS3.485095.22707K562GRWD1
chr195585766355857708+3'-UTR,CDS3.061455.24703K562BUD13
chr195585786755857925+3'-UTR,CDS,intron-Proximal3.565816.13978HepG2PPIG
chr195585751555857593+3'-UTR,CDS,intron-Proximal6.5015037.20460K562SF3B4
chr195585526855855353+5'-UTR,CDS,intron-Distal,intron-Proximal4.334438.86977HepG2EFTUD2
chr195585325055853293+5'-UTR3.400533.73423K562UCHL5
chr195585510655855211+5'-UTR,CDS,intron-Distal4.210354.50960HepG2GRWD1
chr195585527655855388+5'-UTR,CDS,intron-Distal,intron-Proximal3.8592318.88646K562EFTUD2
chr195585532155855404+5'-UTR,CDS,intron-Distal,intron-Proximal3.236269.86732K562PRPF8
chr195585517455855387+5'-UTR,CDS,intron-Distal,intron-Proximal5.057604.97857HepG2AQR
chr195585340055853473+5'-UTR,CDS,intron-Proximal3.3302711.56053K562BUD13
chr195585357855853612+CDS,intron-Distal,intron-Proximal3.387073.31745K562ZNF622
chr195585508155855112+CDS,intron-Distal,intron-Proximal4.7538910.24966K562AQR
chr195585351655853589+CDS,intron-Distal,intron-Proximal3.630728.13137K562EFTUD2
chr195585356555853636+CDS,intron-Distal,intron-Proximal3.7610611.35663K562AQR
chr195585353655853623+CDS,intron-Distal,intron-Proximal3.0234811.56083K562BUD13
chr195585341355853455+5'-UTR,CDS,intron-Proximal4.4447513.09382K562AQR
chr195585363555853693+CDS,intron-Distal4.384413.79199HepG2PPIG
chr195585501255855081+CDS,intron-Distal,intron-Proximal7.2294430.67861K562AQR
chr195585500455855054+CDS,intron-Distal,intron-Proximal3.854428.10864K562PRPF8
chr195585225255852292+intron-Distal3.907543.58835K562HNRNPK
chr195585188055851942+intron-Distal4.320314.87774HepG2HNRNPK
chr195585297055853072+intron-Distal,intron-Proximal4.313614.39969K562TARDBP
chr195585684755856897+intron-Distal3.512643.94496K562RBFOX2
chr195585498055855012+intron-Distal,intron-Proximal3.647046.21987K562AQR
chr195585480755854835+intron-Distal5.149346.15361K562PRPF8
chr195585702855857103+intron-Distal3.925953.50800K562HNRNPA1
chr195585724555857322+intron-Distal3.263575.43626K562GTF2F1
chr195585537355855398+intron-Distal,intron-Proximal5.150676.22530K562AQR
chr195585200455852068+intron-Distal4.630365.62822K562HNRNPK
chr195585298155853058+intron-Distal3.217005.06354K562EIF4G2
chr195585426255854321+intron-Distal,intron-Proximal5.6470416.41423K562AQR
chr195585160755851699+intron-Distal4.092387.62617K562HNRNPK
chr195585737755857429+intron-Distal3.401034.83282K562EFTUD2
chr195585299955853057+intron-Distal3.445277.65809K562PRPF8
chr195585297655853052+intron-Distal4.217073.14375HepG2RBFOX2
chr195585479955854837+intron-Distal4.105187.70980K562BUD13
chr195585483555854889+intron-Distal4.598943.80336K562DDX6
chr195585211355852174+intron-Distal4.664835.53033K562HNRNPK
chr195585181955851880+intron-Distal4.400995.38060HepG2HNRNPK
chr195585299255853049+intron-Distal4.289863.42734K562PTBP1
chr195585725055857332+intron-Distal3.359675.87066K562CSTF2T
chr195585739255857434+intron-Distal3.171276.04408K562SF3B4
chr195585170555851786+intron-Distal4.941107.95752K562HNRNPK
chr195585732355857442+intron-Distal4.1625915.24914K562RBFOX2
chr195585480055854873+intron-Distal5.513515.84502K562DHX30
chr195585478855854843+intron-Distal4.632566.34807K562RBFOX2
chr195585538355855433+intron-Distal,intron-Proximal4.202924.61506HepG2EFTUD2
chr195585156255851734+intron-Distal4.4507611.39049HepG2HNRNPK
chr195585479355854905+intron-Distal4.1649410.15155K562EFTUD2
chr195585736155857433+intron-Distal3.162636.12169K562AQR
chr195585631855856378+CDS,intron-Distal3.159043.15535K562EWSR1
chr195585422155854262+intron-Distal,intron-Proximal6.6320338.04753K562AQR
chr195585151655851607+intron-Distal4.785587.23289K562HNRNPK
chr195585164455851798+intron-Distal4.2902113.50956HepG2DDX59
chr195585540055855475+intron-Distal,intron-Proximal4.302067.42639K562EFTUD2
chr195585737055857421+intron-Distal4.007677.33270K562DROSHA
chr195585178655851900+intron-Distal5.6020612.09097K562HNRNPK
chr195585726055857335+intron-Distal3.282705.81412K562SF3B4
chr195585660555856663+intron-Distal4.242685.49043K562HNRNPU
chr195585347355853536+intron-Distal,intron-Proximal3.417819.87841K562BUD13
chr195585196855852041+intron-Distal4.362667.59655HepG2DDX59
chr195585299355853046+intron-Distal3.603996.12493K562DROSHA
chr195585351555853570+intron-Distal,intron-Proximal4.011256.75344HepG2EFTUD2
chr195585480955854896+intron-Distal3.157825.10726K562UCHL5
chr195585699955857102+intron-Distal5.0785315.94994K562RBFOX2
chr195585422955854292+intron-Distal,intron-Proximal3.965856.40042K562EFTUD2
chr195585632955856406+CDS,intron-Distal3.093053.50009K562CSTF2T
chr195585208355852207+intron-Distal4.4897611.39049HepG2HNRNPK
chr195585722155857291+intron-Distal4.002337.14855HepG2RBFOX2
chr195585212555852199+intron-Distal4.302517.31982HepG2DDX59
chr195585480755854835+intron-Distal4.266337.22920K562AQR
chr195585725455857323+intron-Distal3.585358.76201K562RBFOX2
chr195585491255854950+intron-Distal,intron-Proximal4.461417.53589K562AQR
chr195585597555856029+3'-UTR,intron-Distal,intron-Proximal3.324243.93915K562EWSR1
chr195585190055852004+intron-Distal4.972126.78870K562HNRNPK
chr195585222855852305+intron-Distal4.209665.18268HepG2DDX59
chr195585297455853056+intron-Distal3.203573.80754K562RBFOX2
chr195585163355851758+intron-Distal5.026676.97910HepG2PCBP2
chr195585729755857329+intron-Distal3.276307.42773K562BUD13
chr195585421955854221+intron-Distal,intron-Proximal7.0407827.38231K562AQR
chr195585751055857581+intron-Proximal3.079305.86490HepG2SF3B4
chr195585752755857574+intron-Proximal3.458945.12722K562BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SUV420H2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SUV420H2 is not available on ENCORE database.

  • 68 RBPs can affect the levels of SUV420H2.  








The Knockdown/knockout RNA-Seq assay for SUV420H2 is not available on ENCORE database.





68 RBPs can affect the gene expression of SUV420H2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SUV420H2ENSG00000133247.950.3451094.98120-0.915802.551501.51930HepG2AATF
SUV420H2ENSG00000133247.9221.84110131.500100.754403.288202.15920HepG2AKAP8
SUV420H2ENSG00000133247.9149.4135056.755301.396405.596104.78120HepG2BOP1
SUV420H2ENSG00000133247.9262.16180156.422000.744903.355702.27230HepG2CCAR1
SUV420H2ENSG00000133247.947.4363097.30560-1.036503.000001.57020HepG2CSTF2T
SUV420H2ENSG00000133247.960.98900102.52840-0.749402.092701.30940HepG2DDX24
SUV420H2ENSG00000133247.9272.32520148.004300.879603.994503.26370HepG2DDX6
SUV420H2ENSG00000133247.9141.2113065.071701.117705.599804.62880HepG2DNAJC21
SUV420H2ENSG00000133247.9294.37640227.413500.372201.830401.32060HepG2ETF1
SUV420H2ENSG00000133247.9139.5229059.031801.240803.337602.63860HepG2GPKOW
SUV420H2ENSG00000133247.9123.8973072.280900.777403.210802.44250HepG2HNRNPF
SUV420H2ENSG00000133247.9136.2708072.590300.908504.249103.51070HepG2HNRNPU
SUV420H2ENSG00000133247.9108.0318071.177200.601901.964101.34600HepG2IGF2BP1
SUV420H2ENSG00000133247.9211.22300115.062000.876302.800301.60200HepG2KHDRBS1
SUV420H2ENSG00000133247.9223.40330133.755700.739904.067103.14260HepG2NOL12
SUV420H2ENSG00000133247.995.1420046.792201.023702.855901.38160HepG2NOLC1
SUV420H2ENSG00000133247.9131.6931064.744801.024204.790003.84710HepG2PPIL4
SUV420H2ENSG00000133247.9258.78530190.074500.445101.837501.39280HepG2RBM22
SUV420H2ENSG00000133247.9258.31660178.018500.537002.593802.06680HepG2NELFE
SUV420H2ENSG00000133247.9121.8638064.645000.914603.745703.01550HepG2SAFB2
SUV420H2ENSG00000133247.9288.23020214.680300.424902.100601.64520HepG2SRFBP1
SUV420H2ENSG00000133247.9255.89230186.390000.457102.296801.82020HepG2SSB
SUV420H2ENSG00000133247.9153.8549082.351400.901602.596701.93900HepG2SUPV3L1
SUV420H2ENSG00000133247.9149.3044070.536001.081705.212504.57090HepG2TIAL1
SUV420H2ENSG00000133247.9237.53800132.015700.847303.452402.51490HepG2UBE2L3
SUV420H2ENSG00000133247.995.50230169.97350-0.831703.802203.11720HepG2UTP3
SUV420H2ENSG00000133247.9181.4829081.066301.162604.679403.74540HepG2XRN2
SUV420H2ENSG00000133247.9258.55870412.67210-0.674503.479402.14030K562AARS
SUV420H2ENSG00000133247.91873.777501038.241800.8517024.9225023.33050K562AGGF1
SUV420H2ENSG00000133247.91787.301101140.932500.647509.342407.24740K562AKAP8
SUV420H2ENSG00000133247.91811.140801080.352800.745304.045203.25410K562AKAP8L
SUV420H2ENSG00000133247.91494.016601133.578900.398205.232803.93140K562ATP5C1
SUV420H2ENSG00000133247.9591.73510410.965700.525804.891703.59600K562BCLAF1
SUV420H2ENSG00000133247.9537.95180311.778900.786902.831201.76240K562CSTF2
SUV420H2ENSG00000133247.91063.654001431.24980-0.428202.430001.51790K562CELF1
SUV420H2ENSG00000133247.9514.82880806.29340-0.647204.720803.90170K562DDX47
SUV420H2ENSG00000133247.9871.23590672.847000.372702.919401.56380K562DDX6
SUV420H2ENSG00000133247.9577.19180354.054000.705006.419105.08900K562FIP1L1
SUV420H2ENSG00000133247.9168.77600392.19070-1.2164011.021608.60850K562FKBP4
SUV420H2ENSG00000133247.9340.00190721.04310-1.0845018.8863017.41550K562FXR1
SUV420H2ENSG00000133247.927.71350146.56320-2.4029014.2856012.40070K562G3BP2
SUV420H2ENSG00000133247.9559.64350403.120100.473202.406701.35530K562HNRNPF
SUV420H2ENSG00000133247.9703.18630324.957701.113605.174903.59240K562IGF2BP2
SUV420H2ENSG00000133247.91399.822901146.471200.287902.525701.74080K562KIF1C
SUV420H2ENSG00000133247.9128.23430210.68040-0.716302.741701.81300K562KRR1
SUV420H2ENSG00000133247.9644.56370402.666600.678603.608901.79800K562LSM11
SUV420H2ENSG00000133247.91458.567701097.498200.410204.349602.91020K562MAK16
SUV420H2ENSG00000133247.91599.004501284.344800.316003.121602.14590K562MBNL1
SUV420H2ENSG00000133247.9345.83400240.828100.522002.873801.97890K562METAP2
SUV420H2ENSG00000133247.9749.21280444.514800.753006.792604.26840K562NUSAP1
SUV420H2ENSG00000133247.9656.91270401.965000.708504.029803.01550K562PPIG
SUV420H2ENSG00000133247.9728.45620404.668200.848008.551906.77620K562PSIP1
SUV420H2ENSG00000133247.9641.973801269.44820-0.983605.270704.14700K562PUF60
SUV420H2ENSG00000133247.9850.669201350.79220-0.667103.700402.45160K562PUM1
SUV420H2ENSG00000133247.91357.333301071.305200.341302.596402.06680K562PUS1
SUV420H2ENSG00000133247.91603.532301043.915300.6191010.919509.76360K562RBM15
SUV420H2ENSG00000133247.9389.82880625.36110-0.681803.763101.90610K562RPS3A
SUV420H2ENSG00000133247.9756.66320953.36030-0.333403.079002.21920K562SF3A3
SUV420H2ENSG00000133247.9417.08940152.298601.4534020.0636017.58500K562SF3B4
SUV420H2ENSG00000133247.9486.11850350.121200.473402.781401.75380K562SRFBP1
SUV420H2ENSG00000133247.9535.24530324.951600.719902.565101.88090K562SRSF1
SUV420H2ENSG00000133247.9594.43570361.050800.719206.370104.65660K562SRSF4
SUV420H2ENSG00000133247.9601.22890307.011400.969505.582403.99070K562SRSF5
SUV420H2ENSG00000133247.9288.28110479.65740-0.734506.264005.02190K562SYNCRIP
SUV420H2ENSG00000133247.975.16630143.86060-0.936503.053701.49220K562TAF15
SUV420H2ENSG00000133247.9547.45830328.768500.735602.222201.58420K562TARDBP
SUV420H2ENSG00000133247.9658.19730317.161601.053206.166704.87460K562TIA1
SUV420H2ENSG00000133247.9633.12120311.475401.023304.390502.95980K562TRA2A
SUV420H2ENSG00000133247.9637.89340413.642500.624805.279503.87010K562TRIM56
SUV420H2ENSG00000133247.91319.082101106.399600.253602.547101.33380K562TROVE2
SUV420H2ENSG00000133247.9557.65530911.50040-0.7089012.6510010.99820K562WDR43
SUV420H2ENSG00000133247.9344.13750585.69690-0.767203.803301.87310K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SUV420H2 is not available on ENCORE database.





8 RBPs can affect the splicing of SUV420H2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESUV420H2ENSG00000133247.9chr19+558535825585374855853161558534145585410955855186-0.263000.000000.00007excludedK562SRSF1
SESUV420H2ENSG00000133247.9chr19+5585358255853748558531615585341455854109558551860.461000.000980.07438includedHepG2QKI
SESUV420H2ENSG00000133247.9chr19+558553455585536555855047558552115585758055857717-0.134000.000340.00488excludedK562AQR
SESUV420H2ENSG00000133247.9chr19+558535825585374855853161558534145585410955854219-0.188000.002930.03004excludedK562AQR
SESUV420H2ENSG00000133247.9chr19+558553455585536555855047558552115585758055857717-0.133000.007090.08088excludedK562PUS1
SESUV420H2ENSG00000133247.9chr19+5585188155852082558512535585132555853161558534140.051000.003250.09130includedK562HNRNPU
SESUV420H2ENSG00000133247.9chr19+5585358255853748558531615585341455854109558542190.211000.000390.01305includedK562AGGF1
SESUV420H2ENSG00000133247.9chr19+5585534555855365558550475585521155857580558577170.191000.000790.03362includedK562PTBP1
SESUV420H2ENSG00000133247.9chr19+558553455585536555855047558552115585758055857717-0.181000.001390.02527excludedK562HNRNPC
A3SSSUV420H2ENSG00000133247.9chr19+5585502355855211558550475585521155854109558542190.066000.000260.00204longerK562AQR
RISUV420H2ENSG00000133247.9chr19+5585316155853748558531615585341455853582558537480.364000.000010.00009includedK562AQR
RISUV420H2ENSG00000133247.9chr19+558541095585518655854109558542195585502355855186-0.159000.001800.01148excludedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SUV420H2 is not avaliable on ENCORE database.