STX1A

General Information

Gene Name       : STX1A
Gene ID             : ENSG00000106089.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: STX1A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878STX1AENSG00000106089.111.232.081.66ENCSR000AEF
HepG2STX1AENSG00000106089.1110.666.578.62ENCSR985KAT
K562STX1AENSG00000106089.117.124.125.62ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for STX1A is not avaliable on ENCORE database.



Proteins bound to RNA
  • STX1A RNA is bound by 3 proteins.  







eCLIP assay for STX1A is not avaliable on ENCORE database.





3 proteins are bound to STX1A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr77311704273117109-CDS,intron-Distal,intron-Proximal3.725324.25955HepG2RBFOX2
chr77311690373116978-intron-Distal,intron-Proximal5.0625612.22125HepG2RBFOX2
chr77311552873115561-intron-Distal,intron-Proximal4.501223.18939HepG2RBFOX2
chr77311533273115449-intron-Distal,intron-Proximal6.3924018.03905HepG2RBFOX2
chr77311544973115498-intron-Distal4.890866.37401HepG2RBFOX2
chr77311533473115392-intron-Distal,intron-Proximal4.103993.84029K562DROSHA
chr77311683273116900-intron-Distal,intron-Proximal3.656573.76326HepG2RBFOX2
chr77311698673117029-intron-Distal,intron-Proximal3.140153.02792HepG2RBFOX2
chr77313341673133520-intron-Distal3.615024.14880HepG2CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for STX1A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for STX1A is not available on ENCORE database.

  • 101 RBPs can affect the levels of STX1A.  








The Knockdown/knockout RNA-Seq assay for STX1A is not available on ENCORE database.





101 RBPs can affect the gene expression of STX1A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
STX1AENSG00000106089.7338.19060128.476101.3962017.4441016.19570HepG2ACO1
STX1AENSG00000106089.7369.46190202.494300.867405.728004.25510HepG2AKAP8
STX1AENSG00000106089.7253.02460172.944400.548902.683402.00660HepG2AUH
STX1AENSG00000106089.7217.9761094.423601.206905.156703.87340HepG2BCCIP
STX1AENSG00000106089.7174.1705099.662100.805303.479602.81720HepG2BOP1
STX1AENSG00000106089.7251.30840109.678801.196105.912605.04040HepG2CELF1
STX1AENSG00000106089.7184.55140102.135700.853403.572202.87200HepG2DDX3X
STX1AENSG00000106089.7285.6802092.850201.6213010.259008.88500HepG2DDX55
STX1AENSG00000106089.7279.8150087.758701.6728012.9694011.75230HepG2DDX6
STX1AENSG00000106089.7167.0953084.342700.986204.178803.45900HepG2EIF2S1
STX1AENSG00000106089.7208.7830090.761501.201805.625404.66750HepG2EIF4B
STX1AENSG00000106089.7376.53210198.576100.923008.896607.92150HepG2ETF1
STX1AENSG00000106089.7527.97370176.865601.5777016.0555014.46020HepG2FIP1L1
STX1AENSG00000106089.7192.9827094.064901.036605.117404.19640HepG2FXR1
STX1AENSG00000106089.7198.5313087.242101.186206.631105.62270HepG2G3BP1
STX1AENSG00000106089.7134.0272080.756200.730802.290001.36690HepG2GNB2L1
STX1AENSG00000106089.7276.10000177.272100.639102.375501.34250HepG2GRSF1
STX1AENSG00000106089.7287.30280162.119300.825404.345402.59950HepG2HNRNPA0
STX1AENSG00000106089.7183.04540127.158000.525502.255001.60280HepG2HNRNPF
STX1AENSG00000106089.7250.3189088.379901.5019010.911909.60430HepG2HNRNPK
STX1AENSG00000106089.7164.41650100.514200.709903.318102.65930HepG2HNRNPU
STX1AENSG00000106089.7191.3880088.673701.109805.687004.75210HepG2IGF2BP2
STX1AENSG00000106089.7276.20870176.434800.646502.795701.96100HepG2LARP4
STX1AENSG00000106089.7134.9768079.121500.770502.699201.57930HepG2LARP7
STX1AENSG00000106089.7189.8969094.097901.012904.888804.02450HepG2MAGOH
STX1AENSG00000106089.7228.30190143.117500.673602.984202.14450HepG2MSI2
STX1AENSG00000106089.7266.7679096.843901.4618010.641509.43960HepG2NCBP2
STX1AENSG00000106089.7219.42570116.979700.907405.295504.24710HepG2NOL12
STX1AENSG00000106089.7126.8992063.423301.000502.825001.35630HepG2NOLC1
STX1AENSG00000106089.7689.80510175.059201.9782021.3741018.93150HepG2PABPC1
STX1AENSG00000106089.7166.4961086.226300.949204.156503.28340HepG2PABPC4
STX1AENSG00000106089.7152.7393094.620700.690702.689102.08890HepG2PCBP1
STX1AENSG00000106089.7299.92070171.740900.804203.882102.07530HepG2PNPT1
STX1AENSG00000106089.7231.05850111.655801.049105.052904.27650HepG2PUF60
STX1AENSG00000106089.7193.85050118.514100.709803.483702.83340HepG2PUM1
STX1AENSG00000106089.7326.03590118.435901.4608014.5888013.12670HepG2PUM2
STX1AENSG00000106089.7174.99920104.290800.746602.136501.57590HepG2QKI
STX1AENSG00000106089.7287.8550089.732501.6815010.343309.04470HepG2RAVER1
STX1AENSG00000106089.7387.43750165.970201.222906.292205.58780HepG2RBM22
STX1AENSG00000106089.7320.71020184.984700.793804.187702.31750HepG2RBM47
STX1AENSG00000106089.7174.27470107.145900.701702.655102.12300HepG2NELFE
STX1AENSG00000106089.7173.5071099.767300.798303.439302.76190HepG2RECQL
STX1AENSG00000106089.7207.74650136.951300.601102.781502.09680HepG2RPLP0
STX1AENSG00000106089.7478.29990192.152601.3156012.2559010.77870HepG2SF3A3
STX1AENSG00000106089.7189.2948097.982200.949904.573503.68360HepG2SF3B1
STX1AENSG00000106089.7195.33400100.252300.962205.083704.32360HepG2SF3B4
STX1AENSG00000106089.7167.73480104.371500.684403.179202.49730HepG2SMN1
STX1AENSG00000106089.7506.27520187.452501.4333023.0946022.01540HepG2SRFBP1
STX1AENSG00000106089.7209.30150110.227700.925005.393404.56110HepG2SRSF5
STX1AENSG00000106089.7177.2091085.111601.057906.360305.58470HepG2SRSF9
STX1AENSG00000106089.7117.10060162.74500-0.474901.774601.34150HepG2SSB
STX1AENSG00000106089.7402.52320167.499501.264806.602104.84200HepG2STIP1
STX1AENSG00000106089.7227.32420125.373100.858403.737803.03400HepG2SUCLG1
STX1AENSG00000106089.7161.8668092.411900.808602.078501.48030HepG2SUPV3L1
STX1AENSG00000106089.7131.7290061.928801.088803.551202.43890HepG2TFIP11
STX1AENSG00000106089.7140.3563086.419500.699602.502401.70530HepG2TIA1
STX1AENSG00000106089.7153.9253098.543600.643302.843802.27410HepG2TRIM56
STX1AENSG00000106089.7212.70600109.061000.963602.099801.34760HepG2TUFM
STX1AENSG00000106089.7321.16590151.282201.086007.454806.43030HepG2U2AF1
STX1AENSG00000106089.7263.1469073.260401.844706.056004.54150HepG2U2AF2
STX1AENSG00000106089.7190.77800115.424800.724802.253301.50280HepG2UBE2L3
STX1AENSG00000106089.7129.0196054.577501.241105.100204.06130HepG2UCHL5
STX1AENSG00000106089.7260.52140164.523800.663004.033503.32960HepG2UTP3
STX1AENSG00000106089.7334.04990187.418200.833707.985507.18140HepG2ZNF622
STX1AENSG00000106089.7363.23790188.785500.944108.804707.86840K562AGGF1
STX1AENSG00000106089.7316.19780207.485900.607703.105902.04990K562AKAP8
STX1AENSG00000106089.7418.10590196.449501.089602.807302.14910K562AKAP8L
STX1AENSG00000106089.7405.53360180.791501.165409.966208.95810K562AQR
STX1AENSG00000106089.7150.4191096.419700.641502.055601.30970K562BOP1
STX1AENSG00000106089.7167.20510102.517400.705602.759401.97880K562CPSF6
STX1AENSG00000106089.7364.05360198.808700.872708.488307.42750K562DDX47
STX1AENSG00000106089.7239.3555092.984001.364009.540407.75250K562EFTUD2
STX1AENSG00000106089.7267.1057099.094701.4304012.5548010.76390K562EIF4A3
STX1AENSG00000106089.7142.3526089.236300.673702.775101.62040K562EIF4B
STX1AENSG00000106089.76.6848031.32490-2.228403.568002.74050K562G3BP2
STX1AENSG00000106089.7195.2788097.875400.996405.145904.06850K562GPKOW
STX1AENSG00000106089.7323.49520191.192200.758604.497803.53830K562GRSF1
STX1AENSG00000106089.7195.97120132.865400.560602.477301.46110K562HNRNPA1
STX1AENSG00000106089.7220.28020121.100200.863002.791501.56590K562HNRNPA2B1
STX1AENSG00000106089.7241.27800109.942801.133807.258206.33560K562HNRNPC
STX1AENSG00000106089.7252.96460147.141000.781605.059803.83880K562HNRNPU
STX1AENSG00000106089.798.0023053.749600.866502.293701.38460K562IGF2BP2
STX1AENSG00000106089.7318.26900208.448200.610504.004902.98850K562KIF1C
STX1AENSG00000106089.7138.7333083.582600.730902.105001.30170K562KRR1
STX1AENSG00000106089.7142.5854056.454801.336607.330205.93510K562MAGOH
STX1AENSG00000106089.7276.93890175.140200.661004.322403.41270K562NSUN2
STX1AENSG00000106089.7259.25550105.918701.291305.567904.02790K562PABPN1
STX1AENSG00000106089.7125.0915050.224601.316405.747904.32810K562PCBP2
STX1AENSG00000106089.7292.12210125.916001.214004.999002.86350K562PPP1R8
STX1AENSG00000106089.7242.7418090.484201.423609.583008.18280K562PRPF8
STX1AENSG00000106089.7182.0654098.588300.884902.509501.65460K562PSIP1
STX1AENSG00000106089.7384.35390239.001900.685304.671803.61460K562PUF60
STX1AENSG00000106089.7375.77250194.755100.948104.308303.65310K562PUS1
STX1AENSG00000106089.7360.88180189.816600.926804.724003.96880K562RBM15
STX1AENSG00000106089.7156.2263052.577901.571009.924508.17830K562RBM22
STX1AENSG00000106089.7142.9559090.012300.667302.277401.38250K562RCC2
STX1AENSG00000106089.7157.4152092.166200.772202.548501.76520K562RPS19
STX1AENSG00000106089.7219.1315096.859801.177702.610101.45730K562SF1
STX1AENSG00000106089.7392.98570172.805301.1852013.7568012.04970K562SF3A3
STX1AENSG00000106089.7211.6827093.095701.185006.387904.87510K562SF3B1
STX1AENSG00000106089.7103.7268032.576201.670808.048006.54580K562SF3B4
STX1AENSG00000106089.7370.55740118.074701.649908.944706.12900K562SFPQ
STX1AENSG00000106089.7182.39200116.162100.650802.815601.54090K562SLBP
STX1AENSG00000106089.7271.41510111.246201.286605.374303.47930K562SNRNP200
STX1AENSG00000106089.7147.0956085.322700.785702.766101.74190K562SRFBP1
STX1AENSG00000106089.7255.07430177.041600.526702.732501.80140K562SRPK2
STX1AENSG00000106089.7103.9893053.777000.951303.090602.34670K562SRSF1
STX1AENSG00000106089.7237.05320162.827300.541802.682101.53590K562SRSF7
STX1AENSG00000106089.7330.51920208.531700.664404.243902.41010K562SUCLG1
STX1AENSG00000106089.7153.2891087.604400.807102.939701.89050K562SUPV3L1
STX1AENSG00000106089.7109.8273054.417601.013003.714902.88970K562TARDBP
STX1AENSG00000106089.7106.6871052.494101.023103.623802.66730K562TIA1
STX1AENSG00000106089.7158.2822094.817800.739202.660501.74480K562TIAL1
STX1AENSG00000106089.7197.05000100.802200.966904.840603.50760K562TRIM56
STX1AENSG00000106089.7250.22180185.704200.430101.978201.36410K562UPF1
STX1AENSG00000106089.7313.84600197.531100.667902.592901.35570K562UTP18
STX1AENSG00000106089.7245.41950159.952100.617502.514001.37280K562UTP3
STX1AENSG00000106089.7229.69590158.902400.531502.430901.60850K562WDR3
STX1AENSG00000106089.7282.31920165.232000.772705.994904.79950K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for STX1A is not available on ENCORE database.





1 RBPs can affect the splicing of STX1A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESTX1AENSG00000106089.7chr7-7311772973117972731171747311731273118084731181580.260000.000810.02605includedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for STX1A is not avaliable on ENCORE database.