SNPH

General Information

Gene Name       : SNPH
Gene ID             : ENSG00000101298.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SNPH)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SNPHENSG00000101298.140.030.100.07ENCSR000AEF
HepG2SNPHENSG00000101298.140.040.010.03ENCSR985KAT
K562SNPHENSG00000101298.141.531.011.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SNPH is not avaliable on ENCORE database.



Proteins bound to RNA
  • SNPH RNA is bound by 1 proteins.  







eCLIP assay for SNPH is not avaliable on ENCORE database.





1 proteins are bound to SNPH RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2012873681287500+3'-UTR6.0396215.26585K562UPF1
chr2012887161288763+3'-UTR4.190133.69433K562UPF1
chr2012887631288843+3'-UTR5.067926.29854K562UPF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SNPH is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SNPH is not available on ENCORE database.

  • 85 RBPs can affect the levels of SNPH.  








The Knockdown/knockout RNA-Seq assay for SNPH is not available on ENCORE database.





85 RBPs can affect the gene expression of SNPH :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SNPHENSG00000101298.926.832502.177503.623205.535104.73420HepG2ACO1
SNPHENSG00000101298.970.847602.999804.5617012.4445011.39890HepG2AKAP1
SNPHENSG00000101298.939.728206.791802.548205.709904.78400HepG2AUH
SNPHENSG00000101298.91.0788015.19090-3.815702.986902.36780HepG2BOP1
SNPHENSG00000101298.984.317802.872904.8752017.1371015.72110HepG2DDX3X
SNPHENSG00000101298.92.0026015.83690-2.983402.366901.46260HepG2DDX59
SNPHENSG00000101298.940.126405.063202.986304.159203.23040HepG2FIP1L1
SNPHENSG00000101298.917.331902.646802.711002.392201.74700HepG2FXR1
SNPHENSG00000101298.94.5168024.89350-2.462403.244102.47270HepG2HNRNPF
SNPHENSG00000101298.91.6171015.08720-3.221802.415901.82200HepG2HNRNPLL
SNPHENSG00000101298.910.322701.063703.278602.090501.55560HepG2HNRNPU
SNPHENSG00000101298.93.3931024.51380-2.852903.657402.83450HepG2IGF2BP1
SNPHENSG00000101298.91.3637013.37750-3.294202.135901.47610HepG2NSUN2
SNPHENSG00000101298.90.000006.80670-99999.999992.064501.38790HepG2PRPF4
SNPHENSG00000101298.918.517200.436705.405904.925404.23890HepG2PTBP1
SNPHENSG00000101298.948.957206.514502.909707.590406.83090HepG2RBM22
SNPHENSG00000101298.913.111700.486404.752302.498201.97970HepG2NELFE
SNPHENSG00000101298.92.3814026.80450-3.492604.484903.64460HepG2RPLP0
SNPHENSG00000101298.924.147801.314404.199304.972004.17530HepG2RPS19
SNPHENSG00000101298.915.251101.103403.788803.316702.62350HepG2SMN1
SNPHENSG00000101298.921.182007.359701.525001.795001.36490HepG2SRFBP1
SNPHENSG00000101298.922.038700.475205.535405.176204.58100HepG2SRSF1
SNPHENSG00000101298.91.0271016.06800-3.967602.973601.92800HepG2SRSF3
SNPHENSG00000101298.919.241702.619502.876802.763302.13780HepG2SRSF5
SNPHENSG00000101298.93.5635024.45430-2.778703.714802.92550HepG2SRSF7
SNPHENSG00000101298.924.097602.982603.014203.407002.73050HepG2SUCLG1
SNPHENSG00000101298.9675.90160226.195201.5791024.2440021.01290K562ABCF1
SNPHENSG00000101298.9256.36010180.351500.507302.497701.57260K562AKAP8
SNPHENSG00000101298.9453.09590170.778401.4076017.7663015.83360K562AKAP8L
SNPHENSG00000101298.9209.01900371.04550-0.828005.042804.29310K562AQR
SNPHENSG00000101298.9272.67180179.190200.605603.742102.66650K562ATP5C1
SNPHENSG00000101298.9661.07270439.504000.588805.378002.57300K562AUH
SNPHENSG00000101298.9274.38960107.290101.3546012.6134010.53260K562BCLAF1
SNPHENSG00000101298.9363.62070196.131200.890507.995405.98010K562CCDC124
SNPHENSG00000101298.9425.13600232.196100.872506.379304.08750K562CKAP4
SNPHENSG00000101298.9354.82460235.222900.593002.984901.83300K562CPEB4
SNPHENSG00000101298.9184.6597081.395501.181706.214004.54290K562CSTF2
SNPHENSG00000101298.9639.36750386.515700.726007.572805.98630K562CELF1
SNPHENSG00000101298.9305.79740192.560900.667204.122102.31660K562DDX19B
SNPHENSG00000101298.9333.47930201.197100.728905.342903.61700K562DDX21
SNPHENSG00000101298.9151.6875094.074000.689103.034401.64260K562DDX27
SNPHENSG00000101298.9313.96370149.559501.069809.626607.55800K562DDX3X
SNPHENSG00000101298.9239.97270108.188201.149203.261101.41450K562DDX51
SNPHENSG00000101298.9234.18820103.598601.176604.153302.55120K562EEF2
SNPHENSG00000101298.9263.04380100.048801.3945010.008508.16490K562EFTUD2
SNPHENSG00000101298.9288.43390164.301400.811806.524504.63220K562EIF2S1
SNPHENSG00000101298.9149.97190220.08100-0.553302.750002.03290K562EIF2S2
SNPHENSG00000101298.9287.10160140.730101.028509.577407.30000K562EIF4B
SNPHENSG00000101298.9223.81140314.37380-0.490202.543801.63840K562EIF4G2
SNPHENSG00000101298.9296.12990162.605700.864805.948304.66960K562FIP1L1
SNPHENSG00000101298.917.2458054.21400-1.652403.799602.94180K562G3BP2
SNPHENSG00000101298.9209.74260100.313901.064005.259003.28040K562GEMIN5
SNPHENSG00000101298.9361.43520216.001800.742606.127404.47260K562GLRX3
SNPHENSG00000101298.9172.5650091.587100.913804.134903.16920K562GPKOW
SNPHENSG00000101298.9269.49350110.973901.279909.562808.50690K562HNRNPC
SNPHENSG00000101298.9391.68340219.964000.832307.154705.37580K562HNRNPL
SNPHENSG00000101298.9304.65330214.511400.506002.848601.94210K562HNRNPU
SNPHENSG00000101298.9385.84870201.278400.938706.869504.13300K562IGF2BP1
SNPHENSG00000101298.9317.17340138.564001.194608.700106.50340K562IGF2BP2
SNPHENSG00000101298.9252.92090181.233900.480702.467201.69380K562KIF1C
SNPHENSG00000101298.9236.41660107.603901.135507.725605.25790K562LARP7
SNPHENSG00000101298.9211.2208089.400201.240307.831806.32300K562METAP2
SNPHENSG00000101298.9597.20280335.096100.833507.997106.12530K562MSI2
SNPHENSG00000101298.9226.67940156.024500.538802.498301.33370K562NCBP2
SNPHENSG00000101298.9482.77430343.860500.489403.019101.45280K562NOL12
SNPHENSG00000101298.9219.3773098.777901.151105.950003.89910K562NONO
SNPHENSG00000101298.9336.70840252.329600.416102.430401.72650K562NSUN2
SNPHENSG00000101298.9238.36290129.412100.881105.067303.73490K562PCBP2
SNPHENSG00000101298.9206.61350387.91710-0.908806.485605.21040K562PCBP3
SNPHENSG00000101298.9178.52110297.54340-0.737004.966903.88950K562POLR2G
SNPHENSG00000101298.9308.83240184.596700.742304.818403.68980K562PPIG
SNPHENSG00000101298.9153.3120099.512800.623402.114601.33410K562PSIP1
SNPHENSG00000101298.9213.18800141.351600.592702.923602.24350K562PTBP1
SNPHENSG00000101298.9236.30300364.81630-0.626504.338602.97760K562PUM1
SNPHENSG00000101298.9223.23940165.019600.435901.820701.32180K562RBM15
SNPHENSG00000101298.9378.73220135.458601.4832017.5254015.19830K562RBM22
SNPHENSG00000101298.9221.08160132.108100.742803.732802.03560K562RBM34
SNPHENSG00000101298.9228.61280142.567400.681203.447602.20750K562NELFE
SNPHENSG00000101298.9485.85770248.978300.9644011.427609.86070K562SF3A3
SNPHENSG00000101298.9191.8517056.311301.768406.912205.52380K562SF3B4
SNPHENSG00000101298.9202.5236097.298901.057504.696502.51250K562SRP68
SNPHENSG00000101298.9514.07400255.083001.0109014.0627012.16760K562SRPK2
SNPHENSG00000101298.9200.50050138.588300.532701.937001.33280K562SRSF1
SNPHENSG00000101298.9254.58500179.540700.503702.679101.53380K562SRSF7
SNPHENSG00000101298.9294.49480161.834300.863603.213601.44580K562STIP1
SNPHENSG00000101298.9191.3680094.162001.023004.550103.22120K562SUPV3L1
SNPHENSG00000101298.9152.86920298.44690-0.965206.686105.39980K562SYNCRIP
SNPHENSG00000101298.9349.33150140.224701.316803.276002.50460K562TARDBP
SNPHENSG00000101298.9161.4209085.898200.910003.726601.77260K562TFIP11
SNPHENSG00000101298.9270.30190135.271900.998607.267405.83990K562TIA1
SNPHENSG00000101298.9260.28560132.826600.970503.447702.20080K562TRA2A
SNPHENSG00000101298.9544.03390287.839100.9183011.746509.15480K562TROVE2
SNPHENSG00000101298.9264.8554099.711201.4093010.035108.04650K562UCHL5
SNPHENSG00000101298.9426.96340224.547900.927007.331205.42560K562UTP3
SNPHENSG00000101298.9578.82540439.721000.396402.703601.42970K562WRN
SNPHENSG00000101298.9197.68080101.616400.959904.097702.51040K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SNPH is not available on ENCORE database.






No RBPs affect the alternative splcing events of SNPH on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SNPH is not avaliable on ENCORE database.