SLC35E1

General Information

Gene Name       : SLC35E1
Gene ID             : ENSG00000127526.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC35E1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC35E1ENSG00000127526.1412.9316.2214.57ENCSR000AEF
HepG2SLC35E1ENSG00000127526.1421.5515.6718.61ENCSR985KAT
K562SLC35E1ENSG00000127526.1422.6023.0922.84ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC35E1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC35E1 RNA is bound by 15 proteins.  







eCLIP assay for SLC35E1 is not avaliable on ENCORE database.





15 proteins are bound to SLC35E1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191666171116661763-3'-UTR,intron-Distal3.8691713.15612K562PUM2
chr191666295216663010-3'-UTR,intron-Distal3.385063.91951K562PUM2
chr191666232816662400-3'-UTR,intron-Distal4.784409.04751K562UPF1
chr191666420316664248-3'-UTR,intron-Distal4.686506.71037HepG2UPF1
chr191666291016662952-3'-UTR,intron-Distal4.328594.66439HepG2AKAP1
chr191666449916664562-3'-UTR,CDS,intron-Distal,intron-Proximal3.204603.88579K562IGF2BP2
chr191666380016663851-3'-UTR,intron-Distal4.095206.36332HepG2UPF1
chr191666123116661329-3'-UTR,intron-Distal3.916377.57190HepG2UPF1
chr191666397616664026-3'-UTR,intron-Distal5.131948.99356HepG2UPF1
chr191666228316662302-3'-UTR,intron-Distal4.706345.24231K562UPF1
chr191666112816661193-3'-UTR,intron-Distal3.149843.34573K562IGF2BP2
chr191666201416662105-3'-UTR,intron-Distal3.1939311.74548K562UPF1
chr191666215416662198-3'-UTR,intron-Distal4.535555.67997HepG2UPF1
chr191666449716664548-3'-UTR,CDS,intron-Distal,intron-Proximal3.418423.34065K562IGF2BP1
chr191666213216662230-3'-UTR,intron-Distal3.616905.73852HepG2FUBP3
chr191666205816662128-3'-UTR,intron-Distal4.5864820.93435K562PUM2
chr191666170716661756-3'-UTR,intron-Distal3.965055.73324K562FAM120A
chr191666424116664254-3'-UTR,intron-Distal3.356456.82132K562YBX3
chr191666297016662984-3'-UTR,intron-Distal4.180705.15345K562UPF1
chr191666429916664397-3'-UTR,intron-Distal4.086343.98353K562RBM15
chr191666145916661508-3'-UTR,intron-Distal4.636013.70195HepG2UPF1
chr191666350116663550-3'-UTR,intron-Distal3.306534.51679HepG2UPF1
chr191666348816663558-3'-UTR,intron-Distal4.053827.46349HepG2AKAP1
chr191666214816662212-3'-UTR,intron-Distal3.8599511.75503K562UPF1
chr191666435216664408-3'-UTR,intron-Distal3.900003.50232K562IGF2BP1
chr191666430316664391-3'-UTR,intron-Distal5.7191712.32677HepG2UPF1
chr191666324216663333-3'-UTR,intron-Distal,intron-Proximal6.1763122.71172HepG2UPF1
chr191666080216660886-3'-UTR,intron-Distal3.248895.17928K562YBX3
chr191666380116663844-3'-UTR,intron-Distal4.328594.66439HepG2AKAP1
chr191666463116664678-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.191293.26789K562YBX3
chr191666150816661571-3'-UTR,intron-Distal,intron-Proximal4.184394.93514HepG2UPF1
chr191666419816664207-3'-UTR,intron-Distal,intron-Proximal4.457294.31428K562YBX3
chr191666093116660964-3'-UTR,intron-Distal3.504144.14074K562UPF1
chr191666347516663557-3'-UTR,intron-Distal4.1272422.25764K562UPF1
chr191666290116662955-3'-UTR,intron-Distal5.2003016.18694K562UPF1
chr191666455616664607-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.393225.34770HepG2IGF2BP1
chr191666420716664229-3'-UTR,intron-Distal4.7600512.71857K562YBX3
chr191666449816664556-3'-UTR,CDS,intron-Distal,intron-Proximal3.755915.85178HepG2IGF2BP1
chr191666349616663562-3'-UTR,intron-Distal4.7490710.60563HepG2FUBP3
chr191666461516664699-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.221004.53838HepG2IGF2BP1
chr191666120616661332-3'-UTR,intron-Distal4.6206511.39949K562AKAP1
chr191666430816664401-3'-UTR,intron-Distal4.716796.14341HepG2IGF2BP1
chr191666319116663242-3'-UTR,intron-Distal,intron-Proximal4.421248.31857HepG2UPF1
chr191666422916664241-3'-UTR,intron-Distal4.1200911.47083K562YBX3
chr191666261716662662-3'-UTR,intron-Distal4.042776.86497HepG2UPF1
chr191668305316683201-5'-UTR,CDS,intron-Distal,intron-Proximal3.494815.92186HepG2UPF1
chr191668292416682992-5'-UTR,CDS,intron-Distal,intron-Proximal4.884424.79919K562GEMIN5
chr191668310516683191-5'-UTR,CDS,intron-Distal,intron-Proximal3.9969218.54040HepG2DDX3X
chr191668285916683013-5'-UTR,CDS,intron-Distal,intron-Proximal3.6831923.73436HepG2DDX3X
chr191667892016678977-CDS,intron-Distal4.172893.66655K562YBX3
chr191668225116682328-CDS,intron-Distal,intron-Proximal4.378393.89565K562PRPF8
chr191668301316683105-CDS,intron-Distal,intron-Proximal4.1233518.40188HepG2DDX3X
chr191667877416678844-CDS,intron-Distal,intron-Proximal3.533644.88100K562AQR
chr191668225916682309-intron-Distal,intron-Proximal3.899597.53394K562AQR
chr191667254016672677-intron-Distal4.013943.99137K562NONO
chr191667875516678819-intron-Distal,intron-Proximal4.418355.30668HepG2RBFOX2
chr191668230916682323-intron-Distal,intron-Proximal3.518345.35619K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC35E1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC35E1 is not available on ENCORE database.

  • 97 RBPs can affect the levels of SLC35E1.  








The Knockdown/knockout RNA-Seq assay for SLC35E1 is not available on ENCORE database.





97 RBPs can affect the gene expression of SLC35E1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC35E1ENSG00000127526.9870.968301188.38240-0.448304.064002.78840HepG2AATF
SLC35E1ENSG00000127526.91457.342601912.11290-0.391803.235702.21580HepG2ABCF1
SLC35E1ENSG00000127526.91194.145001787.81000-0.5822013.7105012.57500HepG2ACO1
SLC35E1ENSG00000127526.9902.379301243.13030-0.462203.932202.76730HepG2ADAR
SLC35E1ENSG00000127526.91719.229402433.20730-0.501104.096803.46710HepG2AKAP1
SLC35E1ENSG00000127526.9900.878901796.08330-0.9954031.7003029.55600HepG2AKAP8L
SLC35E1ENSG00000127526.91168.470702013.22450-0.7849010.326708.87990HepG2ASCC1
SLC35E1ENSG00000127526.9813.076001787.26950-1.1363047.8268045.86770HepG2CKAP4
SLC35E1ENSG00000127526.9512.69930732.72130-0.515204.002502.73540HepG2CSTF2
SLC35E1ENSG00000127526.91647.873901857.24790-0.172601.992901.34780HepG2DAZAP1
SLC35E1ENSG00000127526.91196.606201653.39830-0.466509.324807.96430HepG2DDX19B
SLC35E1ENSG00000127526.91016.196101283.02610-0.336402.897301.96030HepG2DDX24
SLC35E1ENSG00000127526.91558.187502330.72060-0.580906.037605.14770HepG2DDX3X
SLC35E1ENSG00000127526.92013.899001631.423000.303802.267001.35130HepG2DDX5
SLC35E1ENSG00000127526.92848.067602002.391400.508204.279503.52480HepG2DDX6
SLC35E1ENSG00000127526.9999.663401710.41040-0.7748019.2480017.83080HepG2DKC1
SLC35E1ENSG00000127526.9999.207901251.75450-0.325103.351202.58270HepG2DNAJC21
SLC35E1ENSG00000127526.9818.989801260.45920-0.622006.143204.82020HepG2EEF2
SLC35E1ENSG00000127526.91073.672801450.23100-0.433704.766203.25400HepG2EIF2S2
SLC35E1ENSG00000127526.9798.605501023.21050-0.357502.240001.41850HepG2EIF3D
SLC35E1ENSG00000127526.9934.846201238.08390-0.405303.977202.70770HepG2EIF3G
SLC35E1ENSG00000127526.91484.013102126.89240-0.519204.395003.59370HepG2EIF4A3
SLC35E1ENSG00000127526.92469.382601755.165500.492405.361404.24860HepG2EIF4G2
SLC35E1ENSG00000127526.91136.365401656.14320-0.543406.215504.64980HepG2ESF1
SLC35E1ENSG00000127526.9896.382802121.43130-1.2429049.2041047.25900HepG2ETF1
SLC35E1ENSG00000127526.91133.475201746.87500-0.624009.120707.62550HepG2EWSR1
SLC35E1ENSG00000127526.91583.001101249.367300.341402.973701.79100HepG2FASTKD2
SLC35E1ENSG00000127526.9895.381301246.78460-0.477602.798302.00720HepG2FUBP3
SLC35E1ENSG00000127526.91382.269601990.82720-0.526304.730303.87130HepG2G3BP1
SLC35E1ENSG00000127526.91253.151902113.77210-0.7543010.121208.41790HepG2G3BP2
SLC35E1ENSG00000127526.91267.401901706.75460-0.429407.082705.60870HepG2HDGF
SLC35E1ENSG00000127526.9679.221101263.74710-0.8958013.6942012.42940HepG2HNRNPA1
SLC35E1ENSG00000127526.9813.476901405.69830-0.7891011.233109.91530HepG2HNRNPC
SLC35E1ENSG00000127526.91560.239702016.34640-0.370003.175202.42820HepG2HNRNPK
SLC35E1ENSG00000127526.91089.937401331.89180-0.289202.421001.52990HepG2HNRNPM
SLC35E1ENSG00000127526.91027.206201396.40370-0.443006.863105.94670HepG2HNRNPU
SLC35E1ENSG00000127526.91070.575401899.30510-0.827103.171102.11550HepG2IGF2BP3
SLC35E1ENSG00000127526.9925.190501259.54350-0.445102.805001.60520HepG2KHDRBS1
SLC35E1ENSG00000127526.91383.605101634.18800-0.240103.067101.99600HepG2KIF1C
SLC35E1ENSG00000127526.91475.748602147.06550-0.540905.242504.34590HepG2MAGOH
SLC35E1ENSG00000127526.91412.856202159.02230-0.611805.915405.01910HepG2MATR3
SLC35E1ENSG00000127526.91741.428602209.83050-0.343702.414301.81990HepG2NCBP2
SLC35E1ENSG00000127526.9774.41620985.43080-0.347602.231201.55690HepG2NSUN2
SLC35E1ENSG00000127526.91080.493501382.18390-0.355304.462703.41750HepG2PARN
SLC35E1ENSG00000127526.91632.107302026.04610-0.311902.863702.24980HepG2PCBP1
SLC35E1ENSG00000127526.9647.87050846.16990-0.385203.288001.94370HepG2PKM
SLC35E1ENSG00000127526.91498.500002061.67370-0.460308.144607.30760HepG2PTBP1
SLC35E1ENSG00000127526.91330.682201757.98500-0.401804.111003.40080HepG2PUF60
SLC35E1ENSG00000127526.91585.422801866.15430-0.235203.323902.68640HepG2PUM1
SLC35E1ENSG00000127526.91170.888301864.80630-0.6714012.0016010.66150HepG2PUM2
SLC35E1ENSG00000127526.91225.954101820.97820-0.5708013.3588012.18060HepG2PUS1
SLC35E1ENSG00000127526.91784.631002232.63890-0.323103.589402.89130HepG2QKI
SLC35E1ENSG00000127526.91007.477301441.46680-0.516802.483001.81380HepG2RAVER1
SLC35E1ENSG00000127526.91479.694001773.13440-0.261002.521002.02030HepG2RBM22
SLC35E1ENSG00000127526.91688.721202026.34060-0.262902.095901.50350HepG2RBM25
SLC35E1ENSG00000127526.9892.616201405.67420-0.655207.078205.48430HepG2RBM27
SLC35E1ENSG00000127526.91392.350302294.36510-0.7206018.7300017.56600HepG2NELFE
SLC35E1ENSG00000127526.91322.055802137.03390-0.6928017.5345016.19970HepG2RECQL
SLC35E1ENSG00000127526.91055.009801415.80970-0.424402.182801.34150HepG2RPS10
SLC35E1ENSG00000127526.9687.41790995.63430-0.534405.483204.64980HepG2RPS19
SLC35E1ENSG00000127526.91025.030001296.43690-0.338902.225201.50340HepG2RPS2
SLC35E1ENSG00000127526.9971.126401327.31890-0.450802.680301.89270HepG2RPS3A
SLC35E1ENSG00000127526.9920.049601323.34540-0.524404.663103.25210HepG2RPS5
SLC35E1ENSG00000127526.9667.86270890.00510-0.414302.410801.67220HepG2RRP9
SLC35E1ENSG00000127526.91426.958702105.03220-0.560903.976503.16150HepG2SF3A3
SLC35E1ENSG00000127526.91408.472102146.29630-0.6077013.7973012.63280HepG2SF3B4
SLC35E1ENSG00000127526.9808.462501450.17780-0.8430026.1673024.51950HepG2SMN1
SLC35E1ENSG00000127526.91388.832602240.33890-0.6898018.6876017.68690HepG2SRSF1
SLC35E1ENSG00000127526.91496.353401735.72480-0.214102.214501.64740HepG2SRSF5
SLC35E1ENSG00000127526.91621.160401407.766800.203501.923901.33250HepG2SRSF7
SLC35E1ENSG00000127526.91194.728801738.85700-0.5415010.9731010.08410HepG2SSB
SLC35E1ENSG00000127526.91149.446401840.99990-0.679606.989705.09180HepG2SSRP1
SLC35E1ENSG00000127526.91519.701301974.02240-0.377407.001906.09150HepG2SUCLG1
SLC35E1ENSG00000127526.91768.954501303.417400.440503.245202.23240HepG2SUPT6H
SLC35E1ENSG00000127526.9864.149701161.02670-0.426002.754902.07950HepG2SUPV3L1
SLC35E1ENSG00000127526.91182.983302013.89890-0.7676017.6318016.39120HepG2TAF15
SLC35E1ENSG00000127526.91443.324201083.315800.413803.561902.75180HepG2TARDBP
SLC35E1ENSG00000127526.9823.695801808.26590-1.134407.616705.93990HepG2TBRG4
SLC35E1ENSG00000127526.9841.514501356.81710-0.6892011.0855010.19980HepG2TIAL1
SLC35E1ENSG00000127526.9896.991301447.24840-0.690105.155403.19680HepG2TRA2A
SLC35E1ENSG00000127526.91691.646801368.999700.305201.824901.34790HepG2TRIM56
SLC35E1ENSG00000127526.9579.26170813.05950-0.489103.049501.41620HepG2TROVE2
SLC35E1ENSG00000127526.91292.034101717.43700-0.410604.488603.34420HepG2TUFM
SLC35E1ENSG00000127526.91145.621701651.39990-0.527605.563704.68870HepG2U2AF1
SLC35E1ENSG00000127526.9482.00620685.85760-0.508903.566602.70770HepG2UCHL5
SLC35E1ENSG00000127526.91457.538701918.86090-0.396706.107104.60820HepG2UTP18
SLC35E1ENSG00000127526.91200.258501802.36310-0.5865012.5079011.37540HepG2UTP3
SLC35E1ENSG00000127526.91087.130401585.15250-0.544103.592302.38500HepG2XRCC6
SLC35E1ENSG00000127526.9727.209501142.90330-0.652306.170305.10290HepG2XRN2
SLC35E1ENSG00000127526.9909.784401186.63370-0.383305.339404.45680HepG2ZC3H8
SLC35E1ENSG00000127526.91621.092602053.16900-0.340906.492705.74670HepG2ZNF622
SLC35E1ENSG00000127526.9997.592901672.59450-0.7456017.6525016.34160K562AGGF1
SLC35E1ENSG00000127526.91352.589401740.39850-0.363703.243202.53410K562AKAP8L
SLC35E1ENSG00000127526.92681.530601963.254200.449704.656803.93070K562AQR
SLC35E1ENSG00000127526.91573.417401279.425200.298302.549101.55050K562DDX3X
SLC35E1ENSG00000127526.92390.741902099.748200.187101.896701.33850K562DDX47
SLC35E1ENSG00000127526.91699.788301282.928700.405803.610802.55730K562EFTUD2
SLC35E1ENSG00000127526.9796.594401068.79880-0.424102.411401.75730K562G3BP2
SLC35E1ENSG00000127526.91602.934601000.770400.679509.344007.87780K562GPKOW
SLC35E1ENSG00000127526.91505.836001847.03940-0.294602.519001.73500K562KIF1C
SLC35E1ENSG00000127526.91668.174201334.770700.321603.077401.78330K562NCBP2
SLC35E1ENSG00000127526.91194.620301426.87050-0.256301.996101.31380K562POLR2G
SLC35E1ENSG00000127526.91123.597401726.08280-0.619407.081906.25880K562PUS1
SLC35E1ENSG00000127526.91427.683601111.040700.361703.709502.71550K562SF3B4
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC35E1 is not available on ENCORE database.





5 RBPs can affect the splicing of SLC35E1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC35E1ENSG00000127526.9chr19-1667884216678980166773421667746816682322166823930.204000.000020.00053includedHepG2U2AF2
SESLC35E1ENSG00000127526.9chr19-1667884216678980166773421667746816682322166823930.196000.000100.02351includedHepG2HNRNPUL1
A3SSSLC35E1ENSG00000127526.9chr19-1667734216677504166773421667746816678842166790250.106000.000020.00016longerK562AQR
MXESLC35E1ENSG00000127526.9chr19-1666596216666208166773421667746816660641166647201667884216678980-0.180000.000000.000072includedK562DHX30
MXESLC35E1ENSG00000127526.9chr19-1667734216677468166788421667898016665962166662081668232216682393-0.235000.003820.068882includedK562FXR2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC35E1 is not avaliable on ENCORE database.