SIPA1L1

General Information

Gene Name       : SIPA1L1
Gene ID             : ENSG00000197555.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SIPA1L1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SIPA1L1ENSG00000197555.933.3845.4639.42ENCSR000AEF
HepG2SIPA1L1ENSG00000197555.914.8016.5115.66ENCSR985KAT
K562SIPA1L1ENSG00000197555.99.058.878.96ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SIPA1L1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SIPA1L1 RNA is bound by 16 proteins.  







eCLIP assay for SIPA1L1 is not avaliable on ENCORE database.





16 proteins are bound to SIPA1L1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr147220573472205891+3'-UTR,CDS,intron-Proximal4.370124.14322HepG2FXR2
chr147212510172125154+CDS,intron-Proximal4.741305.68196HepG2BCLAF1
chr147212813472128229+CDS,intron-Proximal3.650914.83899HepG2PRPF8
chr147211717572117228+CDS,intron-Proximal3.381363.27569HepG2BCLAF1
chr147205590772055978+CDS5.067346.04243HepG2BCLAF1
chr147182566271825733+intron-Distal4.009843.77875HepG2ILF3
chr147184641171846452+intron-Distal,intron-Proximal4.132613.86368HepG2HNRNPM
chr147178722971787428+intron-Distal,intron-Proximal3.570186.64741HepG2DDX59
chr147187418871874292+intron-Distal3.307684.97118HepG2U2AF2
chr147187419071874297+intron-Distal4.500823.98265HepG2ILF3
chr147190553971905622+intron-Distal5.2809820.77837HepG2XPO5
chr147178951571789583+intron-Distal4.788136.44072HepG2HNRNPM
chr147187414271874282+intron-Distal6.3824640.51599HepG2PCBP2
chr147187918071879239+intron-Distal4.320194.66899HepG2HNRNPM
chr147187260971872752+intron-Distal3.463915.10768HepG2QKI
chr147180510871805204+intron-Distal3.457214.84410HepG2SUGP2
chr147200901872009110+intron-Distal4.668266.36200HepG2PTBP1
chr147178729971787480+intron-Distal,intron-Proximal4.210458.61746HepG2HNRNPK
chr147178804071788108+intron-Distal4.178154.48529K562TIA1
chr147180699371807043+intron-Distal3.834683.07980HepG2HNRNPM
chr147200278872002859+intron-Distal4.399104.85866HepG2QKI
chr147183110071831149+intron-Distal4.118636.92189HepG2PCBP2
chr147180512771805202+intron-Distal4.462094.38558HepG2HNRNPM
chr147178993871789986+intron-Distal4.558415.16513HepG2HNRNPM
chr147180470871804851+intron-Distal3.763213.68462HepG2MATR3
chr147187412171874255+intron-Distal3.912616.25656HepG2PTBP1
chr147200964772009738+intron-Distal4.472104.03269HepG2PTBP1
chr147183105271831100+intron-Distal3.771195.00478HepG2PCBP2
chr147182546671825532+intron-Distal3.877543.37208HepG2ILF3
chr147189740871897461+intron-Distal3.632584.33990HepG2QKI
chr147188724371887318+intron-Distal4.276543.83958HepG2QKI
chr147205822472058322+intron-Distal4.513507.41529HepG2QKI
chr147187415971874253+intron-Distal3.231075.37989HepG2HNRNPK
chr147200975272009840+intron-Distal4.746325.57752HepG2PTBP1
chr147178718271787269+intron-Proximal3.313175.66201HepG2NCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SIPA1L1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SIPA1L1 is not available on ENCORE database.

  • 85 RBPs can affect the levels of SIPA1L1.  








The Knockdown/knockout RNA-Seq assay for SIPA1L1 is not available on ENCORE database.





85 RBPs can affect the gene expression of SIPA1L1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SIPA1L1ENSG00000197555.51689.815701229.344700.458903.765002.67490HepG2ABCF1
SIPA1L1ENSG00000197555.51228.68300958.610600.358004.721603.96740HepG2ACO1
SIPA1L1ENSG00000197555.52080.66150916.066801.1834017.8988016.67050HepG2AKAP1
SIPA1L1ENSG00000197555.51378.736301074.077600.360102.403201.42910HepG2AKAP8
SIPA1L1ENSG00000197555.51461.83400963.119600.6019011.5668010.13930HepG2AKAP8L
SIPA1L1ENSG00000197555.51085.12880757.956900.517604.181803.22460HepG2ASCC1
SIPA1L1ENSG00000197555.51774.689301344.424500.400506.244905.28010HepG2AUH
SIPA1L1ENSG00000197555.51840.498401310.491400.489905.352404.55400HepG2BOP1
SIPA1L1ENSG00000197555.51213.574001009.454600.265602.082801.40640HepG2CALR
SIPA1L1ENSG00000197555.51026.58090720.114900.511404.108603.17690HepG2CIRBP
SIPA1L1ENSG00000197555.51059.86350754.932500.489402.453601.73730HepG2CNOT7
SIPA1L1ENSG00000197555.51693.247201085.554800.6413013.1466011.94920HepG2CELF1
SIPA1L1ENSG00000197555.5951.544801167.18020-0.294703.335502.53430HepG2DAZAP1
SIPA1L1ENSG00000197555.5552.95510801.36700-0.535304.782903.91810HepG2DDX21
SIPA1L1ENSG00000197555.51401.82310884.703000.663906.665505.52630HepG2DDX55
SIPA1L1ENSG00000197555.51112.44440917.132200.278402.605201.94610HepG2DKC1
SIPA1L1ENSG00000197555.5724.97140880.23060-0.280002.249701.60970HepG2DNAJC21
SIPA1L1ENSG00000197555.5734.42100872.40240-0.248402.283801.67890HepG2DNAJC2
SIPA1L1ENSG00000197555.51217.51990932.718800.384303.730602.37480HepG2EIF2S2
SIPA1L1ENSG00000197555.51318.17920630.317701.0643015.8908013.94760HepG2EIF3D
SIPA1L1ENSG00000197555.5958.32140756.618500.340802.647301.58960HepG2EIF3G
SIPA1L1ENSG00000197555.5517.43650800.77760-0.630004.758303.92300HepG2EIF4A3
SIPA1L1ENSG00000197555.51760.46900779.722701.1748014.1415012.65530HepG2EIF4B
SIPA1L1ENSG00000197555.51447.620301151.544600.330004.141103.15590HepG2EIF4G1
SIPA1L1ENSG00000197555.51181.037601543.60380-0.386205.326504.54050HepG2ETF1
SIPA1L1ENSG00000197555.52632.191401241.385901.0842017.7206016.06520HepG2FIP1L1
SIPA1L1ENSG00000197555.51421.44840970.507100.550503.600402.32830HepG2FUS
SIPA1L1ENSG00000197555.51067.81280808.035600.402102.666101.98690HepG2FXR1
SIPA1L1ENSG00000197555.51315.66530749.527000.811609.130507.95630HepG2G3BP1
SIPA1L1ENSG00000197555.5752.88940561.216000.423802.847801.93640HepG2GEMIN5
SIPA1L1ENSG00000197555.5578.57370888.66280-0.619106.405205.48140HepG2HNRNPA1
SIPA1L1ENSG00000197555.5594.50240988.45470-0.733508.473707.31320HepG2HNRNPC
SIPA1L1ENSG00000197555.51206.348201450.71740-0.266102.866702.13840HepG2HNRNPF
SIPA1L1ENSG00000197555.5776.299101063.19430-0.453706.614605.61660HepG2HNRNPL
SIPA1L1ENSG00000197555.51007.06250761.862000.402502.739802.06700HepG2IGF2BP2
SIPA1L1ENSG00000197555.51629.07500715.038301.187906.791405.29180HepG2IGF2BP3
SIPA1L1ENSG00000197555.51139.80290812.828300.487703.385402.69420HepG2MATR3
SIPA1L1ENSG00000197555.51088.18300659.683300.722004.649103.30680HepG2METAP2
SIPA1L1ENSG00000197555.51370.432601004.884800.447504.703003.66960HepG2MSI2
SIPA1L1ENSG00000197555.51356.65060831.963800.705407.196006.19700HepG2NCBP2
SIPA1L1ENSG00000197555.51357.55150971.956700.481907.445206.16610HepG2PARN
SIPA1L1ENSG00000197555.51252.08820783.432400.6764012.9881011.82620HepG2PCBP1
SIPA1L1ENSG00000197555.5690.96030875.79830-0.342003.069102.29630HepG2PPIL4
SIPA1L1ENSG00000197555.51382.06000797.164700.7938017.6898016.53540HepG2PTBP1
SIPA1L1ENSG00000197555.51786.454501172.847900.6070016.8756015.66740HepG2PUM1
SIPA1L1ENSG00000197555.5894.038701171.97960-0.390503.710502.93950HepG2PUM2
SIPA1L1ENSG00000197555.51140.30550976.408000.223802.097001.54260HepG2PUS1
SIPA1L1ENSG00000197555.51524.70100863.364000.8204015.9948014.67170HepG2QKI
SIPA1L1ENSG00000197555.51475.26630886.405000.734804.585303.69030HepG2RAVER1
SIPA1L1ENSG00000197555.52708.781701290.162001.0700037.3021035.82510HepG2RBM22
SIPA1L1ENSG00000197555.51046.93560783.552700.418003.698602.92620HepG2RBM25
SIPA1L1ENSG00000197555.51446.75680887.173600.7054014.0102012.96840HepG2NELFE
SIPA1L1ENSG00000197555.51060.81930826.271100.360403.814803.10680HepG2RECQL
SIPA1L1ENSG00000197555.51047.82730613.330800.7726010.663609.55210HepG2RPS19
SIPA1L1ENSG00000197555.51186.21170913.890000.376202.419501.41940HepG2RPS5
SIPA1L1ENSG00000197555.5849.67170675.391000.331102.023201.34120HepG2RRP9
SIPA1L1ENSG00000197555.5692.25590874.45490-0.337103.489002.78110HepG2SAFB2
SIPA1L1ENSG00000197555.5838.31480615.566800.445503.288702.25930HepG2SERBP1
SIPA1L1ENSG00000197555.5882.386601059.40110-0.263802.568001.88870HepG2SLBP
SIPA1L1ENSG00000197555.51400.153201019.780500.457208.528807.49800HepG2SMN1
SIPA1L1ENSG00000197555.52253.516801457.181400.6289017.0549016.08870HepG2SRFBP1
SIPA1L1ENSG00000197555.51588.66470866.297500.8748023.0997022.02150HepG2SRSF1
SIPA1L1ENSG00000197555.51865.546401386.154000.428402.870901.84890HepG2SRSF3
SIPA1L1ENSG00000197555.51116.189301425.28900-0.352704.646503.77950HepG2SRSF7
SIPA1L1ENSG00000197555.5990.56100704.774800.491006.963806.15980HepG2SRSF9
SIPA1L1ENSG00000197555.51583.613001265.162600.323804.271903.66390HepG2SSB
SIPA1L1ENSG00000197555.51821.664701240.616700.554104.453903.70000HepG2SUCLG1
SIPA1L1ENSG00000197555.51179.04430880.782900.420703.234802.51070HepG2SUPV3L1
SIPA1L1ENSG00000197555.51013.94100778.647800.380803.692703.06050HepG2TAF15
SIPA1L1ENSG00000197555.5751.69870954.18880-0.344102.813702.30980HepG2TIAL1
SIPA1L1ENSG00000197555.51284.601301062.032200.274401.831001.30920HepG2U2AF1
SIPA1L1ENSG00000197555.51407.07520974.949200.529203.373502.20080HepG2XRCC6
SIPA1L1ENSG00000197555.5611.68270867.03200-0.503302.998702.24390HepG2XRN2
SIPA1L1ENSG00000197555.51506.484201053.736700.5156010.403809.23940HepG2ZC3H8
SIPA1L1ENSG00000197555.5507.48980688.31720-0.439704.141503.47190K562AGGF1
SIPA1L1ENSG00000197555.5487.59530620.68720-0.348201.835301.33830K562AQR
SIPA1L1ENSG00000197555.5659.58510429.149200.620004.833503.66840K562BOP1
SIPA1L1ENSG00000197555.5606.02070456.303800.409302.809002.02050K562CPSF6
SIPA1L1ENSG00000197555.51098.37680789.289900.476606.556205.61310K562DDX47
SIPA1L1ENSG00000197555.5816.08240504.998800.692309.827408.59740K562EIF2S2
SIPA1L1ENSG00000197555.5460.45910273.373500.752103.572502.41430K562EIF3A
SIPA1L1ENSG00000197555.5647.70100392.289000.723305.429303.91670K562EIF3D
SIPA1L1ENSG00000197555.5651.87760464.288000.489503.343802.39810K562FMR1
SIPA1L1ENSG00000197555.5430.13280673.02380-0.645905.608704.52990K562GRSF1
SIPA1L1ENSG00000197555.5219.49170399.07400-0.862506.915306.01170K562HNRNPC
SIPA1L1ENSG00000197555.5496.51460713.26750-0.522604.622403.22020K562HNRNPL
SIPA1L1ENSG00000197555.5391.90570622.87020-0.668405.848604.58150K562PPIG
SIPA1L1ENSG00000197555.5224.19020357.80700-0.674503.846302.75460K562PSIP1
SIPA1L1ENSG00000197555.5797.954201018.66320-0.352302.765801.80610K562PUM2
SIPA1L1ENSG00000197555.5810.93940638.646900.344503.214402.44300K562UPF1
SIPA1L1ENSG00000197555.5686.61380568.268900.272802.183901.42550K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SIPA1L1 is not available on ENCORE database.





1 RBPs can affect the splicing of SIPA1L1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESIPA1L1ENSG00000197555.5chr14+721170517211722672090764720909537212504972125153-0.107000.004220.06621excludedHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SIPA1L1 is not avaliable on ENCORE database.