RP11-1023L17.1

General Information

Gene Name       : RP11-1023L17.1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-1023L17.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-1023L17.1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-1023L17.1 RNA is bound by 36 proteins.  







eCLIP assay for RP11-1023L17.1 is not avaliable on ENCORE database.





36 proteins are bound to RP11-1023L17.1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr53418962734189655-intron-Distal,intron-Proximal4.109004.70114K562FUS
chr53419260034192707-intron-Distal4.5373712.65876K562EWSR1
chr53419183934191884-intron-Distal3.4926212.48100K562CSTF2T
chr53419135534191385-intron-Distal3.9284013.56902K562FUS
chr53419317934193249-intron-Distal4.487735.82242K562EWSR1
chr53419279634192844-intron-Distal3.620789.62377K562FUS
chr53419031634190336-intron-Distal4.203243.83825K562TAF15
chr53419050834190535-intron-Distal4.413946.28603K562FUS
chr53418292434182977-intron-Distal,intron-Proximal4.304755.09803HepG2EIF3H
chr53419249434192531-intron-Distal3.139616.68270K562CSTF2T
chr53419236534192391-intron-Distal3.404713.67103HepG2FKBP4
chr53419184334191879-intron-Distal3.571027.91405HepG2FUS
chr53419219834192236-intron-Distal3.050514.99242HepG2FKBP4
chr53419109134191104-intron-Distal3.375995.07299K562TAF15
chr53419184334191886-intron-Distal3.622718.83977HepG2FKBP4
chr53419136234191431-intron-Distal3.395345.74494K562DDX51
chr53419075434190823-intron-Distal3.378298.53149K562TIA1
chr53417555434175609-intron-Distal3.052156.17838K562ZNF622
chr53418950234189556-intron-Distal3.950674.18895HepG2FKBP4
chr53419002634190069-intron-Distal3.855674.97824K562TAF15
chr53419272734192796-intron-Distal3.7160112.17273K562FUS
chr53419046834190496-intron-Distal3.704743.19512HepG2FKBP4
chr53419263734192711-intron-Distal3.2817917.51373K562DROSHA
chr53419195434191981-intron-Distal4.648007.63791K562FUS
chr53419293934193001-intron-Distal4.041474.10258HepG2FUS
chr53419187934191924-intron-Distal3.425419.55904HepG2FUS
chr53419010234190114-intron-Distal3.918454.11145K562FUS
chr53419169334191736-intron-Distal4.338146.24469HepG2FKBP4
chr53419291734192955-intron-Distal4.496556.09551K562FUS
chr53419082434190840-intron-Distal4.6498113.52140K562FUS
chr53419258734192701-intron-Distal3.677544.61282K562EXOSC5
chr53417556134175610-intron-Distal3.795843.45590K562GRWD1
chr53418949934189559-intron-Distal3.195247.22172HepG2CSTF2T
chr53417556034175605-intron-Distal3.503987.02567HepG2BCLAF1
chr53419294234192991-intron-Distal3.274023.52787K562EWSR1
chr53419138534191429-intron-Distal5.0113330.27675K562FUS
chr53419135234191429-intron-Distal3.8776310.25423HepG2SFPQ
chr53419235934192399-intron-Distal3.767788.65261K562CSTF2T
chr53418293534182986-intron-Distal,intron-Proximal5.1036018.98002K562U2AF2
chr53419260034192708-intron-Distal3.072627.74060HepG2TAF15
chr53419045634190495-intron-Distal4.020744.44432K562TAF15
chr53417592634175928-intron-Distal,intron-Proximal3.650825.11891HepG2GRWD1
chr53419135734191426-intron-Distal3.030587.74290K562HNRNPUL1
chr53419075334190824-intron-Distal6.2494222.98204K562FUS
chr53417561334175642-intron-Distal3.928556.23335HepG2GRWD1
chr53419259134192704-intron-Distal3.519673.52645HepG2NCBP2
chr53419321234193278-intron-Distal4.851358.60984K562FUS
chr53417556034175613-intron-Distal4.726975.85983HepG2GRWD1
chr53419011634190154-intron-Distal4.112494.20405K562EWSR1
chr53419108534191130-intron-Distal3.163785.12554K562DROSHA
chr53419354434193596-intron-Distal4.715153.30336K562EWSR1
chr53418986534189895-intron-Distal3.848027.36088K562FUS
chr53418994034189969-intron-Distal3.387495.60791K562FUS
chr53416835434168437-intron-Distal3.279677.24951K562HNRNPL
chr53419259434192701-intron-Distal4.9046321.69243K562TAF15
chr53419219134192244-intron-Distal4.663749.93860K562EWSR1
chr53417604234176063-intron-Distal,intron-Proximal4.387074.21675K562ZNF622
chr53419053534190580-intron-Distal3.881167.29439K562FUS
chr53418293034183034-intron-Distal,intron-Proximal3.1202613.49763K562SF3B4
chr53419011634190156-intron-Distal4.228154.48497K562NONO
chr53419156334191609-intron-Distal3.204746.05036HepG2FKBP4
chr53419032334190343-intron-Distal4.583633.30336K562EWSR1
chr53421335834213469-intron-Distal3.689603.06150K562KHSRP
chr53417555134175615-intron-Distal3.357244.13112K562SRSF1
chr53419260034192614-intron-Distal3.311513.93932K562DROSHA
chr53419020934190277-intron-Distal3.9602312.53409K562FUS
chr53419110434191131-intron-Distal3.375995.07299K562TAF15
chr53418985134189865-intron-Distal3.660666.78069K562FUS
chr53419237334192399-intron-Distal3.747287.00002K562FUS
chr53419219734192240-intron-Distal3.546024.61337K562EXOSC5
chr53419235834192400-intron-Distal3.967075.62476K562EWSR1
chr53419188634191937-intron-Distal3.023469.52191HepG2FKBP4
chr53419144834191484-intron-Distal3.700085.61600K562FUS
chr53418287434182936-intron-Distal,intron-Proximal4.043963.60656K562NOLC1
chr53419040634190440-intron-Distal4.220204.93241K562FUS
chr53419137434191427-intron-Distal3.740995.60212HepG2HNRNPU
chr53416836434168459-intron-Distal3.709369.31890HepG2HNRNPL
chr53419220234192235-intron-Distal4.035228.93661K562FUS
chr53419012834190191-intron-Distal3.141344.32871K562AKAP8L
chr53419155234191616-intron-Distal5.0659318.93901K562FUS
chr53419044934190536-intron-Distal6.1486910.47585K562EWSR1
chr53419010934190154-intron-Distal3.282993.34554K562NOLC1
chr53424195134242079-intron-Distal4.185803.51329HepG2MATR3
chr53419017434190209-intron-Distal4.110799.34351K562FUS
chr53417555634175613-intron-Distal4.032893.48187K562RBM15
chr53419109234191129-intron-Distal3.803527.78087K562FUS
chr53419084034190875-intron-Distal4.182589.55102K562FUS
chr53419236234192400-intron-Distal3.200923.18103HepG2FUS
chr53419262634192700-intron-Distal3.5063510.47385HepG2FKBP4
chr53419260434192710-intron-Distal3.0511016.52516K562CSTF2T
chr53418291234182984-intron-Distal,intron-Proximal3.3638026.76193HepG2BCLAF1
chr53417592434175962-intron-Distal,intron-Proximal3.286936.93667HepG2PPIG
chr53419079534190857-intron-Distal3.350705.96704HepG2FUS
chr53419015434190188-intron-Distal3.204933.34554K562NOLC1
chr53424114334241187-intron-Distal4.118216.11008K562EXOSC5
chr53419249034192532-intron-Distal3.473295.24039K562EWSR1
chr53418297334182992-intron-Distal,intron-Proximal3.730745.06646HepG2U2AF1
chr53419184534191936-intron-Distal3.8852820.50505K562FUS
chr53418769934187761-intron-Distal3.524446.75305K562MATR3
chr53419247734192525-intron-Distal3.115353.74323K562DROSHA
chr53419075034190859-intron-Distal3.7883610.72038K562EWSR1
chr53417561334175643-intron-Distal,intron-Proximal3.052806.47139HepG2PPIG
chr53419219234192240-intron-Distal3.5251312.67285K562CSTF2T
chr53419154234191611-intron-Distal4.068766.45362K562EWSR1
chr53419077034190847-intron-Distal3.252788.03911K562DROSHA
chr53419188434191938-intron-Distal3.6720319.39772K562CSTF2T
chr53417560834175642-intron-Distal3.193016.28688K562UCHL5
chr53419184734191931-intron-Distal3.0460721.12565K562DROSHA
chr53419183734191935-intron-Distal4.4275611.11302K562EWSR1
chr53418950134189540-intron-Distal4.063193.00997K562TAF15
chr53417560934175642-intron-Distal3.506818.32162K562ZNF622
chr53416485334164937-intron-Distal4.109588.43456K562TARDBP
chr53419249534192534-intron-Distal4.919726.66405K562TAF15
chr53418950434189555-intron-Distal3.068763.05821K562EWSR1
chr53419138434191429-intron-Distal3.4064715.21870K562TAF15
chr53419137234191428-intron-Distal3.4082616.84640K562CSTF2T
chr53419169734191742-intron-Distal3.8341812.93223K562CSTF2T
chr53419137334191431-intron-Distal3.8260712.75481HepG2FKBP4
chr53418272034182784-intron-Distal,intron-Proximal4.300456.99120K562AQR
chr53419011434190146-intron-Distal4.990679.53349K562FUS
chr53419262434192727-intron-Distal3.3954612.73698K562FUS
chr53419135634191430-intron-Distal3.528928.73183HepG2FUS
chr53419014634190174-intron-Distal5.4374213.41386K562FUS
chr53419219034192245-intron-Distal3.875975.10669K562HNRNPM
chr53417546134175519-intron-Distal,intron-Proximal4.754105.48475K562TIA1
chr53424194734242051-intron-Distal3.264593.59803HepG2PTBP1
chr53419184034191931-intron-Distal3.3974217.31367K562TAF15
chr53419219434192240-intron-Distal4.5946915.44130K562TAF15
chr53419237334192396-intron-Distal3.336127.22172HepG2CSTF2T
chr53419031034190336-intron-Distal3.319313.74491K562CSTF2T
chr53419219534192238-intron-Distal4.278869.29993K562HNRNPUL1
chr53419045734190508-intron-Distal3.746106.41844K562FUS
chr53418459634184661-intron-Distal3.231485.95302HepG2HNRNPC
chr53418962234189672-intron-Distal,intron-Proximal4.913414.42197K562EWSR1
chr53417592434175962-intron-Distal,intron-Proximal3.209226.62505K562UCHL5
chr53421839934218431-intron-Distal,intron-Proximal3.998595.06180HepG2BCLAF1
chr53419295534193029-intron-Distal5.3616811.38124K562FUS
chr53419155434191612-intron-Distal4.882437.73240K562NONO
chr53419136834191428-intron-Distal3.475733.86744K562HNRNPM
chr53419135734191430-intron-Distal4.2789415.34589K562EWSR1
chr53419185034191924-intron-Distal3.2590511.44498K562MTPAP
chr53419248934192539-intron-Distal3.162034.17814HepG2FKBP4
chr53418292534182991-intron-Distal,intron-Proximal3.2102613.54803HepG2U2AF2
chr53419248834192535-intron-Distal5.2714412.39747K562FUS
chr53417592834175970-intron-Distal3.424786.42383HepG2GRWD1
chr53419292634193002-intron-Distal3.923814.70126HepG2SFPQ
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-1023L17.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-1023L17.1 is not available on ENCORE database.

  • 66 RBPs can affect the levels of RP11-1023L17.1.  








The Knockdown/knockout RNA-Seq assay for RP11-1023L17.1 is not available on ENCORE database.





66 RBPs can affect the gene expression of RP11-1023L17.1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-1023L17.1ENSG00000215158.560.14690103.97250-0.789602.704702.10320HepG2ACO1
RP11-1023L17.1ENSG00000215158.529.9058070.13780-1.229802.707402.18110HepG2AKAP1
RP11-1023L17.1ENSG00000215158.553.70560138.99710-1.371906.376105.50990HepG2BOP1
RP11-1023L17.1ENSG00000215158.559.5328096.15970-0.691702.324901.55560HepG2DDX19B
RP11-1023L17.1ENSG00000215158.5289.61740144.907800.998904.596303.34750HepG2DDX59
RP11-1023L17.1ENSG00000215158.5124.2417059.698301.057303.243202.50140HepG2EIF4B
RP11-1023L17.1ENSG00000215158.5252.69610106.981501.239906.055504.95940HepG2FIP1L1
RP11-1023L17.1ENSG00000215158.590.1839036.285201.313402.104501.41100HepG2FUBP3
RP11-1023L17.1ENSG00000215158.586.47480144.65630-0.742302.366501.77080HepG2GPKOW
RP11-1023L17.1ENSG00000215158.5121.4084058.100101.063203.693402.89580HepG2HNRNPK
RP11-1023L17.1ENSG00000215158.5122.3291069.550400.814503.105802.29160HepG2PRPF4
RP11-1023L17.1ENSG00000215158.5102.9911056.418500.868202.531101.92930HepG2QKI
RP11-1023L17.1ENSG00000215158.5110.4973051.200201.109704.001003.20200HepG2RBM25
RP11-1023L17.1ENSG00000215158.598.9558053.984500.874102.566701.96910HepG2RECQL
RP11-1023L17.1ENSG00000215158.596.17560169.93690-0.821303.186202.32860HepG2RPS3A
RP11-1023L17.1ENSG00000215158.5120.8738046.049901.392106.996406.19090HepG2SRSF9
RP11-1023L17.1ENSG00000215158.5108.2861050.871901.089804.048703.39070HepG2TAF15
RP11-1023L17.1ENSG00000215158.598.1596046.753201.070002.564801.75780HepG2TIA1
RP11-1023L17.1ENSG00000215158.545.0945076.88320-0.769701.962301.47150HepG2TRIM56
RP11-1023L17.1ENSG00000215158.592.27210152.21220-0.722102.586701.53330HepG2XPO5
RP11-1023L17.1ENSG00000215158.5273.44800630.71790-1.205706.084105.27200K562AQR
RP11-1023L17.1ENSG00000215158.5273.66490443.92880-0.697902.343101.54620K562BOP1
RP11-1023L17.1ENSG00000215158.5994.639501462.14770-0.555802.645601.50340K562CCDC124
RP11-1023L17.1ENSG00000215158.5249.70810472.05030-0.918705.969804.82230K562CPSF6
RP11-1023L17.1ENSG00000215158.5440.32570772.64440-0.8112012.2987011.03190K562DDX47
RP11-1023L17.1ENSG00000215158.5189.25210296.84120-0.649402.863201.55920K562EEF2
RP11-1023L17.1ENSG00000215158.5209.89600307.08390-0.549002.567801.57330K562EIF3D
RP11-1023L17.1ENSG00000215158.5209.69140313.85160-0.581803.824802.89860K562EIF3G
RP11-1023L17.1ENSG00000215158.5284.80090513.86060-0.851408.536007.09280K562EIF4A3
RP11-1023L17.1ENSG00000215158.5632.20740830.24020-0.393104.018702.88900K562EIF4G2
RP11-1023L17.1ENSG00000215158.5514.05900321.381500.677504.640503.11370K562FKBP4
RP11-1023L17.1ENSG00000215158.5402.36330277.453600.536203.385001.88470K562FUS
RP11-1023L17.1ENSG00000215158.5205.47600534.39100-1.3789022.5051020.89640K562FXR1
RP11-1023L17.1ENSG00000215158.5751.36420533.494300.493904.226202.42060K562G3BP1
RP11-1023L17.1ENSG00000215158.5286.11150450.71310-0.655602.711201.92460K562GPKOW
RP11-1023L17.1ENSG00000215158.5297.31500419.46050-0.496502.978902.19590K562GRSF1
RP11-1023L17.1ENSG00000215158.5243.08450370.11730-0.606503.724803.04510K562HNRNPC
RP11-1023L17.1ENSG00000215158.5286.00900698.30540-1.2878017.8644015.12190K562HNRNPL
RP11-1023L17.1ENSG00000215158.5135.88210326.95120-1.266709.882007.89310K562HNRNPM
RP11-1023L17.1ENSG00000215158.5375.92180539.00450-0.519903.587602.68610K562HSPD1
RP11-1023L17.1ENSG00000215158.5471.23310330.062200.513603.181701.51130K562LSM11
RP11-1023L17.1ENSG00000215158.5341.00160586.46620-0.782305.346504.16550K562MAGOH
RP11-1023L17.1ENSG00000215158.5377.52870585.32410-0.632604.307003.13380K562MATR3
RP11-1023L17.1ENSG00000215158.5313.37370439.93730-0.489402.533201.69880K562METAP2
RP11-1023L17.1ENSG00000215158.5143.32930282.59760-0.979406.224904.13060K562NONO
RP11-1023L17.1ENSG00000215158.5173.37840300.89570-0.795304.608502.22070K562PA2G4
RP11-1023L17.1ENSG00000215158.5395.50810521.86700-0.400002.348001.45140K562PCBP2
RP11-1023L17.1ENSG00000215158.5165.05720271.74210-0.719303.679601.53890K562PES1
RP11-1023L17.1ENSG00000215158.5647.27820419.285900.626402.945101.33740K562PKM
RP11-1023L17.1ENSG00000215158.5205.57000334.03560-0.700404.869803.80530K562POLR2G
RP11-1023L17.1ENSG00000215158.5296.89730451.24210-0.603904.312003.25680K562PPIG
RP11-1023L17.1ENSG00000215158.5121.71960279.09630-1.197208.226806.93110K562PRPF8
RP11-1023L17.1ENSG00000215158.5354.53440569.76510-0.684405.871504.93370K562PTBP1
RP11-1023L17.1ENSG00000215158.5433.78990905.82210-1.0622015.7285013.75430K562PUF60
RP11-1023L17.1ENSG00000215158.5773.20920963.71510-0.317702.484301.47710K562PUM1
RP11-1023L17.1ENSG00000215158.5701.37110944.01410-0.428604.864503.57960K562PUM2
RP11-1023L17.1ENSG00000215158.5865.56400591.923900.548102.741101.33560K562RAVER1
RP11-1023L17.1ENSG00000215158.5362.45240546.50820-0.592504.137603.08650K562RBM22
RP11-1023L17.1ENSG00000215158.5331.34820575.07240-0.795405.772104.11300K562NELFE
RP11-1023L17.1ENSG00000215158.597.82350284.29130-1.5391011.7395010.02980K562RPS19
RP11-1023L17.1ENSG00000215158.5338.04620649.42940-0.942008.730606.84290K562RPS3
RP11-1023L17.1ENSG00000215158.5147.59300285.36470-0.951205.074603.27260K562RRP9
RP11-1023L17.1ENSG00000215158.5428.36310645.40150-0.591405.827404.55460K562SF3B4
RP11-1023L17.1ENSG00000215158.5318.39920558.52460-0.810807.594606.43090K562SRSF1
RP11-1023L17.1ENSG00000215158.5479.02410626.94290-0.388202.472101.48440K562SRSF4
RP11-1023L17.1ENSG00000215158.5441.45340323.732300.447402.712301.45040K562SSB
RP11-1023L17.1ENSG00000215158.5233.84700335.04780-0.518803.124102.25090K562SYNCRIP
RP11-1023L17.1ENSG00000215158.5386.48330565.33920-0.548703.986503.12980K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-1023L17.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-1023L17.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-1023L17.1 is not avaliable on ENCORE database.