RALGPS2

General Information

Gene Name       : RALGPS2
Gene ID             : ENSG00000116191.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RALGPS2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RALGPS2ENSG00000116191.171.421.151.28ENCSR000AEF
HepG2RALGPS2ENSG00000116191.1714.8816.7715.82ENCSR985KAT
K562RALGPS2ENSG00000116191.170.931.481.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RALGPS2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RALGPS2 RNA is bound by 22 proteins.  







eCLIP assay for RALGPS2 is not avaliable on ENCORE database.





22 proteins are bound to RALGPS2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1178887547178887629+3'-UTR3.366303.12167HepG2FUBP3
chr1178885475178885528+3'-UTR,CDS3.881365.06180HepG2BCLAF1
chr1178885493178885615+3'-UTR4.012853.60441HepG2GRWD1
chr1178694374178694430+5'-UTR3.782474.27210HepG2NCBP2
chr1178745834178745909+5'-UTR,CDS4.220396.22576HepG2BCLAF1
chr1178777221178777266+CDS,intron-Proximal3.7404810.10467HepG2BCLAF1
chr1178790708178790792+CDS,intron-Proximal3.621705.36861HepG2U2AF2
chr1178858775178858833+CDS,intron-Proximal4.686455.87377HepG2PPIG
chr1178858776178858830+CDS,intron-Proximal3.665306.67313HepG2BCLAF1
chr1178875920178875937+CDS4.526884.70478HepG2BCLAF1
chr1178754691178754746+CDS,intron-Proximal4.264967.23562HepG2BCLAF1
chr1178802603178802653+CDS5.107206.13315HepG2BCLAF1
chr1178745909178745946+CDS3.017573.17233HepG2BCLAF1
chr1178866798178866810+CDS,intron-Proximal4.310054.04372HepG2BCLAF1
chr1178753612178753658+CDS,intron-Distal,intron-Proximal4.550767.53358HepG2BCLAF1
chr1178777179178777221+CDS,intron-Proximal4.4852411.55759HepG2BCLAF1
chr1178854288178854317+CDS3.450113.68471HepG2BCLAF1
chr1178875958178876002+CDS3.737866.39464HepG2BCLAF1
chr1178855236178855256+CDS,intron-Proximal4.630114.78529HepG2BCLAF1
chr1178846647178846721+CDS3.343377.39995HepG2BCLAF1
chr1178863078178863156+CDS4.8041810.19430HepG2BCLAF1
chr1178854211178854273+CDS3.551554.51003HepG2PPIG
chr1178780506178780538+CDS3.337626.20035HepG2BCLAF1
chr1178866848178866891+CDS4.026884.51739HepG2BCLAF1
chr1178780448178780506+CDS,intron-Proximal4.0636613.23699HepG2BCLAF1
chr1178848102178848196+CDS,intron-Proximal4.692245.01842HepG2PRPF8
chr1178854208178854332+CDS,intron-Proximal3.052835.87166HepG2GRWD1
chr1178749639178749698+intron-Distal3.899103.05187HepG2QKI
chr1178694601178694681+intron-Distal,intron-Proximal3.657943.40641HepG2GTF2F1
chr1178694599178694659+intron-Distal,intron-Proximal3.926848.82330HepG2EFTUD2
chr1178805926178805972+intron-Distal4.076483.27829HepG2MATR3
chr1178754773178755008+intron-Distal,intron-Proximal3.543494.79415HepG2KHSRP
chr1178875213178875265+intron-Distal4.592614.85866HepG2QKI
chr1178732302178732363+intron-Distal4.189933.07980HepG2HNRNPM
chr1178721283178721356+intron-Distal4.308714.85913HepG2HNRNPC
chr1178749713178749791+intron-Distal4.776545.54528HepG2QKI
chr1178726974178727002+intron-Distal4.258273.89085K562EXOSC5
chr1178704597178704626+intron-Distal3.103233.21744HepG2HNRNPC
chr1178780717178780791+intron-Distal4.1050110.82383HepG2U2AF2
chr1178706064178706168+intron-Distal5.9375015.06634HepG2QKI
chr1178823632178823665+intron-Distal3.663295.42334HepG2QKI
chr1178756650178756747+intron-Distal5.280316.79597HepG2XPO5
chr1178860190178860260+intron-Distal4.588804.20763HepG2U2AF2
chr1178758053178758095+intron-Distal4.372344.52538HepG2PTBP1
chr1178859985178860042+intron-Distal4.720305.34107HepG2KHSRP
chr1178737509178737555+intron-Distal3.922023.63454HepG2SUGP2
chr1178715860178715942+intron-Distal4.536754.40847HepG2PTBP1
chr1178848217178848333+intron-Distal,intron-Proximal4.863555.54528HepG2QKI
chr1178859603178859647+intron-Distal3.458524.79415HepG2KHSRP
chr1178733022178733068+intron-Distal4.235283.30696K562EXOSC5
chr1178780698178780781+intron-Distal3.714824.89779HepG2PTBP1
chr1178725652178725690+intron-Distal4.155043.30687K562EXOSC5
chr1178860168178860248+intron-Distal4.037523.50357HepG2QKI
chr1178726105178726208+intron-Distal4.312936.93499HepG2EXOSC5
chr1178726314178726364+intron-Distal4.143373.60235HepG2HNRNPM
chr1178706168178706255+intron-Distal4.052395.75173HepG2QKI
chr1178805806178805872+intron-Distal3.294033.59803HepG2PTBP1
chr1178729308178729396+intron-Distal3.089484.23155HepG2MATR3
chr1178860293178860356+intron-Distal5.567419.50483HepG2U2AF2
chr1178861585178861648+intron-Distal4.727573.77802HepG2U2AF2
chr1178727645178727734+intron-Distal3.404934.69648HepG2PCBP2
chr1178694866178694919+intron-Distal4.580365.98353HepG2EFTUD2
chr1178722740178722897+intron-Distal3.423813.89652HepG2SFPQ
chr1178727204178727237+intron-Distal4.111313.30687K562EXOSC5
chr1178711738178711845+intron-Distal3.060453.02891HepG2HNRNPL
chr1178726337178726393+intron-Distal4.982567.06230K562EXOSC5
chr1178823665178823695+intron-Distal3.113524.88847HepG2QKI
chr1178694631178694653+intron-Proximal3.458578.93727HepG2PRPF4
chr1178694600178694631+intron-Proximal3.8619710.88032HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RALGPS2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RALGPS2 is not available on ENCORE database.

  • 77 RBPs can affect the levels of RALGPS2.  








The Knockdown/knockout RNA-Seq assay for RALGPS2 is not available on ENCORE database.





77 RBPs can affect the gene expression of RALGPS2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RALGPS2ENSG00000116191.131267.524101770.64660-0.482303.564702.97090HepG2AKAP1
RALGPS2ENSG00000116191.13636.39640882.45460-0.471602.399801.52810HepG2BCCIP
RALGPS2ENSG00000116191.13605.11530994.08130-0.716206.338004.52680HepG2BUD13
RALGPS2ENSG00000116191.13890.941901273.54400-0.515406.760805.80480HepG2CKAP4
RALGPS2ENSG00000116191.13903.777901619.13540-0.841206.559805.38130HepG2CNOT7
RALGPS2ENSG00000116191.131521.49390968.507400.651607.587506.49490HepG2CPSF6
RALGPS2ENSG00000116191.13816.508101295.75520-0.6663011.7948010.64520HepG2CELF1
RALGPS2ENSG00000116191.131176.316001393.17400-0.244102.697101.96320HepG2DAZAP1
RALGPS2ENSG00000116191.13952.155801178.01400-0.307103.099002.22020HepG2DDX19B
RALGPS2ENSG00000116191.131283.982701696.16450-0.401703.005702.35730HepG2DDX3X
RALGPS2ENSG00000116191.131485.386801164.136700.351502.303701.38240HepG2DDX5
RALGPS2ENSG00000116191.131171.87590923.838600.343002.661801.69800HepG2DHX30
RALGPS2ENSG00000116191.131528.243001218.569600.326602.582501.92540HepG2DKC1
RALGPS2ENSG00000116191.13535.99050957.83000-0.8376014.7695013.25430HepG2DNAJC21
RALGPS2ENSG00000116191.13805.83390949.42450-0.236602.199501.60540HepG2DNAJC2
RALGPS2ENSG00000116191.131186.21690892.022600.411103.922802.66320HepG2EIF3G
RALGPS2ENSG00000116191.132284.390501507.103800.599903.104902.37980HepG2EIF4B
RALGPS2ENSG00000116191.131834.450101316.691000.478304.910003.84380HepG2EIF4G2
RALGPS2ENSG00000116191.131457.025301149.249100.342202.919601.79810HepG2ESF1
RALGPS2ENSG00000116191.133073.440701924.094600.6756020.5291019.14930HepG2ETF1
RALGPS2ENSG00000116191.13915.974601244.73360-0.442504.214603.18360HepG2EWSR1
RALGPS2ENSG00000116191.13932.04180722.194300.367902.529601.31370HepG2FKBP4
RALGPS2ENSG00000116191.131339.74310826.015000.697606.056404.91330HepG2FUBP3
RALGPS2ENSG00000116191.131114.619301561.74990-0.486604.184603.34680HepG2FXR1
RALGPS2ENSG00000116191.131510.349101097.837700.460103.461302.75130HepG2GPKOW
RALGPS2ENSG00000116191.131007.937201498.80560-0.572403.755202.45680HepG2GRSF1
RALGPS2ENSG00000116191.13936.465101216.06850-0.376904.306903.10490HepG2HDGF
RALGPS2ENSG00000116191.13944.156201336.78940-0.501703.437501.87320HepG2HNRNPAB
RALGPS2ENSG00000116191.13650.982701075.63370-0.724508.605007.43450HepG2HNRNPC
RALGPS2ENSG00000116191.13905.504801269.05030-0.487008.671007.54170HepG2HNRNPL
RALGPS2ENSG00000116191.13706.643301047.69040-0.568205.001104.18120HepG2HNRNPLL
RALGPS2ENSG00000116191.13597.47470924.37150-0.629606.631005.24570HepG2HNRNPM
RALGPS2ENSG00000116191.13869.215801068.52100-0.297803.001402.37230HepG2HNRNPU
RALGPS2ENSG00000116191.131179.625601472.67170-0.320102.126101.52480HepG2IGF2BP2
RALGPS2ENSG00000116191.131073.119201542.57940-0.523503.872402.42060HepG2KHDRBS1
RALGPS2ENSG00000116191.13831.184301746.70110-1.071403.660802.70680HepG2LARP4
RALGPS2ENSG00000116191.131235.097101571.04940-0.347102.105001.55040HepG2MATR3
RALGPS2ENSG00000116191.131210.598201608.06500-0.409602.987702.33060HepG2NCBP2
RALGPS2ENSG00000116191.131004.579201381.47280-0.459605.607604.52880HepG2NOL12
RALGPS2ENSG00000116191.132154.78750929.007601.2137026.0286024.10110HepG2NSUN2
RALGPS2ENSG00000116191.132015.382801479.818500.445502.074401.32220HepG2PABPC1
RALGPS2ENSG00000116191.131826.021901432.126200.350402.431701.75080HepG2PABPC4
RALGPS2ENSG00000116191.131085.570601312.05870-0.273402.904402.28610HepG2PCBP1
RALGPS2ENSG00000116191.13477.46370669.51220-0.487702.663101.87030HepG2PRPF8
RALGPS2ENSG00000116191.13993.557401335.05150-0.426206.119505.36880HepG2PTBP1
RALGPS2ENSG00000116191.13927.626101318.75910-0.507605.359804.56480HepG2PUF60
RALGPS2ENSG00000116191.131707.939301398.908300.287902.770302.09930HepG2PUM2
RALGPS2ENSG00000116191.131022.764901297.30460-0.343004.060703.33990HepG2PUS1
RALGPS2ENSG00000116191.131643.815801312.261000.324902.853502.17070HepG2RBM25
RALGPS2ENSG00000116191.13424.88540800.89320-0.914505.386704.56160HepG2RPS19
RALGPS2ENSG00000116191.13480.70440662.30910-0.462402.252101.53560HepG2RRP9
RALGPS2ENSG00000116191.131108.303701712.16440-0.627505.158404.21910HepG2SF3A3
RALGPS2ENSG00000116191.131566.229001036.983000.594806.742205.68230HepG2SF3B1
RALGPS2ENSG00000116191.131673.922301264.538200.404503.481702.70980HepG2SLBP
RALGPS2ENSG00000116191.13871.052101109.65650-0.349304.712403.90970HepG2SMN1
RALGPS2ENSG00000116191.13699.560601169.79240-0.741704.395403.17030HepG2SMNDC1
RALGPS2ENSG00000116191.132891.109701816.419700.6704022.6020021.52960HepG2SRFBP1
RALGPS2ENSG00000116191.132338.675201577.116100.5683014.3072013.32340HepG2SSB
RALGPS2ENSG00000116191.131064.630901414.05130-0.409502.442501.41820HepG2STIP1
RALGPS2ENSG00000116191.131641.207301073.397500.612504.071502.59910HepG2SUB1
RALGPS2ENSG00000116191.131110.67300863.743400.362702.501101.85410HepG2SUPV3L1
RALGPS2ENSG00000116191.131650.405801304.034600.339703.847103.20480HepG2TAF15
RALGPS2ENSG00000116191.13650.531901038.20240-0.674409.355008.53100HepG2TIAL1
RALGPS2ENSG00000116191.13647.815401047.55340-0.6934012.8646011.77380HepG2TRIM56
RALGPS2ENSG00000116191.13856.859601145.99510-0.419502.787702.15660HepG2U2AF1
RALGPS2ENSG00000116191.13645.599201465.98280-1.1832038.5144036.64700HepG2UTP3
RALGPS2ENSG00000116191.131062.506001456.07590-0.454602.690101.61220HepG2XPO5
RALGPS2ENSG00000116191.131016.75550846.314100.264602.655901.99670HepG2ZC3H8
RALGPS2ENSG00000116191.131477.542001669.98030-0.176601.932501.45330HepG2ZNF622
RALGPS2ENSG00000116191.13181.39920245.46790-0.436401.808301.32960K562AGGF1
RALGPS2ENSG00000116191.1367.32520115.61630-0.780102.281301.49610K562BOP1
RALGPS2ENSG00000116191.13126.56550223.82180-0.822505.177504.32480K562DDX47
RALGPS2ENSG00000116191.1357.07220107.42630-0.912503.020601.93830K562EIF3D
RALGPS2ENSG00000116191.1376.23860165.62720-1.119303.926102.98680K562EIF3G
RALGPS2ENSG00000116191.1399.57600180.73890-0.860004.030503.32060K562FXR1
RALGPS2ENSG00000116191.1377.76490125.03030-0.685102.040001.51670K562HNRNPC
RALGPS2ENSG00000116191.1340.07280102.63560-1.356804.623603.39230K562HNRNPM
RALGPS2ENSG00000116191.13284.90220186.760000.609203.758802.71510K562HNRNPU
RALGPS2ENSG00000116191.1369.96090114.56960-0.711602.126801.35780K562METAP2
RALGPS2ENSG00000116191.13236.64100151.283200.645302.730901.90440K562PCBP3
RALGPS2ENSG00000116191.13179.78250116.029300.631702.646801.86590K562POLR2G
RALGPS2ENSG00000116191.1373.34150211.63990-1.528908.284507.17640K562PTBP1
RALGPS2ENSG00000116191.13124.00180253.28440-1.030406.241005.46510K562PUS1
RALGPS2ENSG00000116191.1389.05380176.89660-0.990203.382302.48500K562SF3A3
RALGPS2ENSG00000116191.13124.48820207.45780-0.736803.199402.44360K562SRSF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RALGPS2 is not available on ENCORE database.





6 RBPs can affect the splicing of RALGPS2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERALGPS2ENSG00000116191.13chr1+178861364178861442178858776178858831178863053178863159-0.284000.001640.08616excludedHepG2RBM22
SERALGPS2ENSG00000116191.13chr1+1788613641788614421788587761788588311788630531788631590.800000.000000.00000includedHepG2U2AF2
SERALGPS2ENSG00000116191.13chr1+1788613641788614421788587761788588311788630531788631590.651000.000000.00183includedHepG2HNRNPUL1
SERALGPS2ENSG00000116191.13chr1+1788759101788760021788712401788713461788854641788855100.122000.000000.00100includedHepG2HNRNPUL1
SERALGPS2ENSG00000116191.13chr1+178875910178876002178871240178871346178885464178885510-0.115000.000130.00596excludedHepG2SF3A3
SERALGPS2ENSG00000116191.13chr1+1788613641788614421788587761788588311788630531788631590.486000.000000.00039includedHepG2SUPV3L1
MXERALGPS2ENSG00000116191.13chr1+1787907461787908391788025581788026851787804491787805391788466321788467700.531000.000390.086801includedK562WDR3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RALGPS2 is not avaliable on ENCORE database.