PSD3

General Information

Gene Name       : PSD3
Gene ID             : ENSG00000156011.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PSD3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PSD3ENSG00000156011.160.690.850.77ENCSR000AEF
HepG2PSD3ENSG00000156011.162.413.973.19ENCSR985KAT
K562PSD3ENSG00000156011.160.000.040.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PSD3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PSD3 RNA is bound by 10 proteins.  







eCLIP assay for PSD3 is not avaliable on ENCORE database.





10 proteins are bound to PSD3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr81839325818393369-3'-UTR,CDS,intron-Distal3.636073.12746HepG2GRWD1
chr81865877818658832-3'-UTR,CDS,intron-Distal,intron-Proximal4.469143.38968HepG2BCLAF1
chr81862294918623049-5'-UTR,CDS,intron-Distal,intron-Proximal3.130934.39623HepG2PPIG
chr81862295718623005-5'-UTR,CDS,intron-Distal,intron-Proximal3.881365.06180HepG2BCLAF1
chr81862300518623050-5'-UTR,CDS,intron-Distal,intron-Proximal3.630114.09885HepG2BCLAF1
chr81873008318730139-CDS,intron-Distal3.835343.14999HepG2GRWD1
chr81872959518729663-CDS,intron-Distal3.152283.80299HepG2GRWD1
chr81872961518729652-CDS,intron-Distal3.980335.36555HepG2BCLAF1
chr81872539818725474-CDS,intron-Distal4.274868.49795HepG2BCLAF1
chr81872547418725540-CDS,intron-Distal3.545145.15500HepG2BCLAF1
chr81872935718729423-CDS,intron-Distal3.197463.79741HepG2GRWD1
chr81872528718725398-CDS,intron-Distal3.450114.51709HepG2BCLAF1
chr81872540318725475-CDS,intron-Distal4.210354.50960HepG2GRWD1
chr81872547518725573-CDS,intron-Distal4.241284.28220HepG2GRWD1
chr81872970418729728-CDS,intron-Distal3.461593.27569HepG2BCLAF1
chr81872518718725356-CDS,intron-Distal4.847677.25648HepG2GRWD1
chr81862103718621103-intron-Distal3.359575.19856HepG2PTBP1
chr81877140118771518-intron-Distal4.558415.02084HepG2HNRNPM
chr81859389518593987-intron-Distal4.216573.80778HepG2QKI
chr81856861418568725-intron-Distal4.346024.03915HepG2SUGP2
chr81860256318602658-intron-Distal4.245034.30850HepG2QKI
chr81871570718715790-intron-Distal4.202525.06031HepG2CSTF2
chr81860712518607282-intron-Distal3.489463.68462HepG2MATR3
chr81877096718771046-intron-Distal4.093613.60235HepG2HNRNPM
chr81874139618741469-intron-Distal4.249323.83958HepG2QKI
chr81841449118414583-intron-Distal6.9869320.17531HepG2DKC1
chr81865390218654037-intron-Distal5.1425513.58433HepG2QKI
chr81860712818607216-intron-Distal4.214824.07628HepG2PTBP1
chr81862110318621169-intron-Distal3.536754.32634HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PSD3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PSD3 is not available on ENCORE database.

  • 87 RBPs can affect the levels of PSD3.  








The Knockdown/knockout RNA-Seq assay for PSD3 is not available on ENCORE database.





87 RBPs can affect the gene expression of PSD3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PSD3ENSG00000156011.121380.68810900.382600.616705.512804.23310HepG2ABCF1
PSD3ENSG00000156011.12998.62880833.286800.261002.409401.83500HepG2ACO1
PSD3ENSG00000156011.12310.78710608.52740-0.969407.667806.06680HepG2BCCIP
PSD3ENSG00000156011.121351.77450742.365900.8646011.295309.83410HepG2CIRBP
PSD3ENSG00000156011.12606.25730833.24820-0.458804.669803.84950HepG2CKAP4
PSD3ENSG00000156011.12667.88130995.64100-0.576003.102802.28960HepG2CNOT7
PSD3ENSG00000156011.12552.04150728.88700-0.400902.734201.72280HepG2YBX3
PSD3ENSG00000156011.12517.32000729.91210-0.496704.869503.36040HepG2DDX1
PSD3ENSG00000156011.12583.32660753.28980-0.368902.545301.89170HepG2DDX21
PSD3ENSG00000156011.12834.00060559.857300.574904.005302.48820HepG2DDX27
PSD3ENSG00000156011.12573.80170904.63800-0.656805.648604.78440HepG2DDX3X
PSD3ENSG00000156011.121134.01140787.708500.525604.815103.50380HepG2DDX5
PSD3ENSG00000156011.12466.47520777.06770-0.736205.929805.05460HepG2DDX6
PSD3ENSG00000156011.12542.70830690.31130-0.347102.207901.33180HepG2DHX30
PSD3ENSG00000156011.121210.15150797.266500.602007.898006.86470HepG2DKC1
PSD3ENSG00000156011.12585.45510715.72390-0.289802.117301.49340HepG2DNAJC21
PSD3ENSG00000156011.12509.02170709.38710-0.478805.914905.01480HepG2DNAJC2
PSD3ENSG00000156011.121467.43460825.593600.829709.168808.01210HepG2EIF4A3
PSD3ENSG00000156011.12610.18890832.95220-0.449005.148004.06330HepG2EIF4G1
PSD3ENSG00000156011.12346.49020526.30790-0.603105.457803.78040HepG2FAM120A
PSD3ENSG00000156011.121293.94740909.177900.509003.455002.60080HepG2FIP1L1
PSD3ENSG00000156011.12432.25370709.00420-0.713902.595301.61350HepG2FTO
PSD3ENSG00000156011.12627.94230464.010100.436403.025902.20720HepG2FUBP3
PSD3ENSG00000156011.12481.58790772.69930-0.682105.593104.66050HepG2G3BP1
PSD3ENSG00000156011.121274.93290820.284400.636106.451105.08300HepG2G3BP2
PSD3ENSG00000156011.12495.41550802.41710-0.695705.657804.76430HepG2GPKOW
PSD3ENSG00000156011.12517.90850841.69760-0.700604.965903.07830HepG2HNRNPA0
PSD3ENSG00000156011.12376.60730722.58050-0.9401011.4952010.32020HepG2HNRNPA1
PSD3ENSG00000156011.12634.62120775.96780-0.290102.425501.54280HepG2HNRNPA2B1
PSD3ENSG00000156011.12520.26960821.95230-0.659804.867502.99360HepG2HNRNPAB
PSD3ENSG00000156011.12616.01100803.73170-0.383802.596301.92250HepG2HNRNPC
PSD3ENSG00000156011.12513.60150862.40550-0.747705.756103.58670HepG2HNRNPD
PSD3ENSG00000156011.12561.11800782.36560-0.479503.478402.70000HepG2HNRNPK
PSD3ENSG00000156011.12498.84610769.20580-0.624809.700508.51400HepG2HNRNPL
PSD3ENSG00000156011.12328.62300627.31460-0.9328011.212209.53210HepG2HNRNPM
PSD3ENSG00000156011.12523.43590798.41830-0.609108.364707.35070HepG2HNRNPU
PSD3ENSG00000156011.12647.71760815.55880-0.332403.572402.74910HepG2ILF2
PSD3ENSG00000156011.12647.43280970.60080-0.584103.531302.01160HepG2ILF3
PSD3ENSG00000156011.12471.26780948.48650-1.0091010.771808.32250HepG2KHDRBS1
PSD3ENSG00000156011.12800.034401202.10980-0.587404.382003.33050HepG2LARP4
PSD3ENSG00000156011.12554.03750767.20490-0.469603.299501.97400HepG2LIN28B
PSD3ENSG00000156011.12346.87070549.26020-0.663102.681801.60580HepG2NONO
PSD3ENSG00000156011.12824.172201070.36260-0.377102.971201.30700HepG2NUP35
PSD3ENSG00000156011.12507.78650742.23860-0.547703.737401.40850HepG2NUSAP1
PSD3ENSG00000156011.12604.08340790.30440-0.387703.784802.81180HepG2PARN
PSD3ENSG00000156011.12900.23670757.486300.249001.966401.44100HepG2PCBP1
PSD3ENSG00000156011.12583.64420827.44680-0.503602.690901.66710HepG2PCBP2
PSD3ENSG00000156011.12598.22620892.82170-0.577703.108201.49410HepG2PNPT1
PSD3ENSG00000156011.12795.390601153.04030-0.535703.775001.68950HepG2PPIG
PSD3ENSG00000156011.12422.27240712.12630-0.7540010.315908.93860HepG2PPIL4
PSD3ENSG00000156011.121097.43430848.391400.371204.921404.17680HepG2PUM1
PSD3ENSG00000156011.12546.14520847.79280-0.634407.647006.55550HepG2PUM2
PSD3ENSG00000156011.12401.04210848.77750-1.0816016.2664014.99290HepG2PUS1
PSD3ENSG00000156011.121048.33880834.780800.328502.727802.10720HepG2QKI
PSD3ENSG00000156011.121729.32690798.541401.114709.598708.33890HepG2RAVER1
PSD3ENSG00000156011.121943.98830914.159201.0884032.5565031.16620HepG2RBM22
PSD3ENSG00000156011.12603.22710961.54910-0.672704.720502.73320HepG2RBM47
PSD3ENSG00000156011.121170.57930857.789100.448404.002903.37390HepG2NELFE
PSD3ENSG00000156011.121552.240001027.048900.595705.191704.29430HepG2RPLP0
PSD3ENSG00000156011.12773.93470572.975400.433603.424502.74950HepG2RPS19
PSD3ENSG00000156011.12677.48280999.56420-0.561103.646802.72900HepG2RPS3A
PSD3ENSG00000156011.12817.46600456.689000.839808.130906.87130HepG2RRP9
PSD3ENSG00000156011.12565.25910711.03010-0.331002.952302.29210HepG2SAFB2
PSD3ENSG00000156011.12578.67470941.26960-0.701905.627203.75760HepG2SART3
PSD3ENSG00000156011.12645.19220949.66740-0.557702.940601.33540HepG2SBDS
PSD3ENSG00000156011.12813.147101086.17380-0.417702.492401.85320HepG2SF3A3
PSD3ENSG00000156011.121250.50580757.973800.722209.037707.83350HepG2SF3B1
PSD3ENSG00000156011.121110.98870802.484100.469205.989005.17590HepG2SF3B4
PSD3ENSG00000156011.122318.368101032.501401.1669051.2797049.83350HepG2SRFBP1
PSD3ENSG00000156011.121816.71040815.511001.1555015.8004013.30470HepG2SRSF3
PSD3ENSG00000156011.121174.30160681.428000.7851017.4723016.30370HepG2SRSF9
PSD3ENSG00000156011.121784.75850896.442200.9933033.1277031.80280HepG2SSB
PSD3ENSG00000156011.12408.32860607.30090-0.572703.060001.76640HepG2STAU1
PSD3ENSG00000156011.12627.25900869.43900-0.471002.816201.70430HepG2STIP1
PSD3ENSG00000156011.121378.40820752.841000.8725018.7091017.43920HepG2TAF15
PSD3ENSG00000156011.12447.95890782.74640-0.8052013.6863012.56730HepG2TRIM56
PSD3ENSG00000156011.121299.33620777.761500.740308.745307.62320HepG2U2AF1
PSD3ENSG00000156011.12157.19760351.87760-1.162509.708408.28820HepG2UCHL5
PSD3ENSG00000156011.12645.86480963.26700-0.576708.963107.82740HepG2UPF1
PSD3ENSG00000156011.12281.13830545.50630-0.956306.015104.49320HepG2UPF2
PSD3ENSG00000156011.12778.03720990.12700-0.347803.471502.31220HepG2UTP18
PSD3ENSG00000156011.121203.12230930.001200.371404.692703.94490HepG2UTP3
PSD3ENSG00000156011.12515.00230895.30050-0.797806.447304.77670HepG2XPO5
PSD3ENSG00000156011.12250.69480586.32260-1.2258012.6156011.08880HepG2XRN2
PSD3ENSG00000156011.12934.86520594.133000.6539011.4389010.23140HepG2ZC3H8
PSD3ENSG00000156011.12832.403301059.41370-0.347904.520803.86590HepG2ZNF622
PSD3ENSG00000156011.1224.501502.059103.572703.572402.71730K562GRSF1
PSD3ENSG00000156011.1218.347003.502702.388902.168401.63150K562HNRNPC
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PSD3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of PSD3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PSD3 is not avaliable on ENCORE database.