PAXIP1

General Information

Gene Name : PAXIP1
Gene ID : ENSG00000157212.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PAXIP1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PAXIP1	ENSG00000157212.18	19.13	18.49	18.81	ENCSR000AEF
HepG2	PAXIP1	ENSG00000157212.18	12.06	15.38	13.72	ENCSR985KAT
K562	PAXIP1	ENSG00000157212.18	21.77	24.27	23.02	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PAXIP1 is not avaliable on ENCORE database.

Proteins bound to RNA

PAXIP1 RNA is bound by 24 proteins.

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eCLIP assay for PAXIP1 is not avaliable on ENCORE database.

24 proteins are bound to PAXIP1 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	154735505	154735578	-	3'-UTR,intron-Distal	6.24031	15.61756	K562	PUM2
chr7	154760440	154760516	-	3'-UTR,CDS,intron-Distal	4.13611	11.20412	K562	RBM15
chr7	154780642	154780732	-	intron-Distal	4.31732	10.50718	K562	KHSRP
chr7	154760321	154760516	-	3'-UTR,CDS,intron-Distal	3.68568	10.46214	K562	ZNF622
chr7	154767862	154767939	-	5'-UTR,CDS,intron-Distal	5.47342	9.91399	K562	UCHL5
chr7	154794631	154794692	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.39150	9.90275	HepG2	GTF2F1
chr7	154760389	154760440	-	3'-UTR,CDS,intron-Distal	4.21750	8.85903	K562	RBM15
chr7	154760516	154760573	-	3'-UTR,CDS,intron-Distal	5.07498	8.63033	K562	RBM15
chr7	154780845	154780936	-	intron-Distal	5.17030	8.49499	K562	KHSRP
chr7	154794632	154794691	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.05224	8.41080	HepG2	PRPF4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 52 entries

eCLIP assay for PAXIP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PAXIP1 is not available on ENCORE database.
62 RBPs can affect the levels of PAXIP1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PAXIP1 is not available on ENCORE database.

62 RBPs can affect the gene expression of PAXIP1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PAXIP1	ENSG00000157212.14	156.52120	467.54890	-1.57880	15.76510	14.60170	HepG2	AKAP1
PAXIP1	ENSG00000157212.14	1294.90850	772.81710	0.74460	14.03550	12.77690	K562	FXR1
PAXIP1	ENSG00000157212.14	488.01660	803.63780	-0.71960	10.87980	10.06400	HepG2	SRFBP1
PAXIP1	ENSG00000157212.14	375.61550	680.55720	-0.85750	9.72190	8.69790	HepG2	PUF60
PAXIP1	ENSG00000157212.14	423.21340	702.07000	-0.73020	10.36210	7.55610	K562	AKAP1
PAXIP1	ENSG00000157212.14	554.04540	912.17370	-0.71930	7.97030	7.01790	HepG2	BOP1
PAXIP1	ENSG00000157212.14	690.46740	454.28030	0.60390	7.01720	6.34690	HepG2	SRSF1
PAXIP1	ENSG00000157212.14	1163.53680	743.12820	0.64670	7.57600	6.22020	K562	EIF4A3
PAXIP1	ENSG00000157212.14	713.47830	412.50620	0.79040	7.19040	6.14810	HepG2	MAGOH
PAXIP1	ENSG00000157212.14	465.27470	760.72370	-0.70930	6.92940	5.92090	HepG2	RPLP0
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 70 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PAXIP1 is not available on ENCORE database.

14 RBPs can affect the splicing of PAXIP1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PAXIP1	ENSG00000157212.14	chr7	-	154748933	154749004	154747238	154747341	154751599	154751643	-0.16900	0.00000	0.00015	excluded	K562	SF3B4
SE	PAXIP1	ENSG00000157212.14	chr7	-	154777726	154777889	154774928	154775042	154782715	154782779	0.21900	0.00000	0.00080	included	K562	WDR3
SE	PAXIP1	ENSG00000157212.14	chr7	-	154748933	154749004	154747238	154747341	154751599	154751643	-0.08300	0.00000	0.00004	excluded	K562	AQR
SE	PAXIP1	ENSG00000157212.14	chr7	-	154777765	154777889	154774928	154775042	154782715	154782779	0.27900	0.00000	0.00022	included	K562	SUPV3L1
SE	PAXIP1	ENSG00000157212.14	chr7	-	154777726	154777889	154774928	154775042	154782715	154782779	0.26800	0.00000	0.00010	included	K562	UTP18
SE	PAXIP1	ENSG00000157212.14	chr7	-	154748933	154749004	154747238	154747341	154751599	154751643	-0.07900	0.00000	0.00028	excluded	K562	RBM15
SE	PAXIP1	ENSG00000157212.14	chr7	-	154777765	154777889	154774928	154775042	154782715	154782779	-0.24500	0.00000	0.00335	excluded	HepG2	EIF3D
A3SS	PAXIP1	ENSG00000157212.14	chr7	-	154748933	154749041	154748933	154749004	154751599	154751780	0.12100	0.00000	0.00001	longer	K562	AQR
A3SS	PAXIP1	ENSG00000157212.14	chr7	-	154739612	154739835	154739612	154739713	154745964	154746133	0.15500	0.00000	0.00000	longer	K562	AQR
SE	PAXIP1	ENSG00000157212.14	chr7	-	154748933	154749004	154747238	154747341	154751599	154751643	-0.07100	0.00001	0.00042	excluded	K562	PUS1

Showing 1 to 10 of 24 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PAXIP1

General Information

Functions

Localization

Domains (AlphaFold: PAXIP1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PAXIP1 is not avaliable on ENCORE database.

24 proteins are bound to PAXIP1 RNA:

eCLIP assay for PAXIP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PAXIP1 is not available on ENCORE database.

62 RBPs can affect the gene expression of PAXIP1 :

The Knockdown/knockout RNA-Seq assay for PAXIP1 is not available on ENCORE database.

14 RBPs can affect the splicing of PAXIP1 :

The Knockdown/knockout RNA-Seq assay for PAXIP1 is not avaliable on ENCORE database.