OXR1

General Information

Gene Name       : OXR1
Gene ID             : ENSG00000164830.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: OXR1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878OXR1ENSG00000164830.1818.0415.2116.62ENCSR000AEF
HepG2OXR1ENSG00000164830.1813.3415.1214.23ENCSR985KAT
K562OXR1ENSG00000164830.1811.1812.2311.71ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for OXR1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • OXR1 RNA is bound by 18 proteins.  







eCLIP assay for OXR1 is not avaliable on ENCORE database.





18 proteins are bound to OXR1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr8107764257107764347+3'-UTR3.677203.18550K562ZC3H11A
chr8107705061107705112+3'-UTR,CDS,intron-Distal,intron-Proximal4.153734.69071HepG2GRWD1
chr8107704955107705061+3'-UTR,CDS,intron-Distal,intron-Proximal4.346005.64460HepG2GRWD1
chr8107718790107718868+3'-UTR,CDS,intron-Distal3.023403.42031HepG2BCLAF1
chr8107718784107718880+3'-UTR,CDS,intron-Distal3.066595.39266HepG2GRWD1
chr8107719275107719375+3'-UTR,CDS,intron-Distal,intron-Proximal4.261626.23296HepG2BCLAF1
chr8107705098107705106+3'-UTR,CDS,intron-Distal,intron-Proximal4.491343.45943HepG2BCLAF1
chr8107705078107705098+3'-UTR,CDS,intron-Distal3.567343.27569HepG2BCLAF1
chr8107715131107715166+3'-UTR,CDS,intron-Distal,intron-Proximal3.567343.27569HepG2BCLAF1
chr8107718609107718662+3'-UTR,CDS,intron-Distal,intron-Proximal3.342126.19339HepG2BCLAF1
chr8107764783107764843+3'-UTR4.463885.91894K562TIA1
chr8107764446107764496+3'-UTR4.727378.61496K562PUM2
chr8107695425107695494+3'-UTR,CDS,intron-Distal,intron-Proximal3.688083.01531K562YBX3
chr8107726165107726219+CDS,intron-Distal,intron-Proximal4.422593.38968HepG2BCLAF1
chr8107670279107670397+CDS,intron-Distal,intron-Proximal4.333083.60441HepG2GRWD1
chr8107722856107722933+CDS,intron-Distal5.033786.37937HepG2BCLAF1
chr8107641189107641270+intron-Distal4.686946.23638HepG2QKI
chr8107736031107736060+intron-Distal3.525866.60564HepG2ILF3
chr8107743820107743858+intron-Distal4.088734.28663HepG2SUGP2
chr8107705213107705313+intron-Distal4.535325.62025K562KHSRP
chr8107726863107726966+intron-Distal3.378555.14771HepG2KHSRP
chr8107751340107751391+intron-Distal3.140683.51804HepG2HNRNPL
chr8107742022107742132+intron-Distal6.6141121.30205K562LSM11
chr8107727081107727133+intron-Distal4.445314.76003K562KHSRP
chr8107749180107749325+intron-Distal3.805263.42844K562KHSRP
chr8107756828107756898+intron-Distal3.580294.70430K562CSTF2T
chr8107741979107742026+intron-Distal4.2017811.26887HepG2LSM11
chr8107707220107707355+intron-Distal3.274003.76460HepG2HNRNPL
chr8107632085107632208+intron-Distal3.341154.74917HepG2PCBP2
chr8107726997107727081+intron-Distal5.4352210.95353K562KHSRP
chr8107749233107749327+intron-Distal3.780453.20552HepG2KHSRP
chr8107727001107727072+intron-Distal4.543495.64557HepG2KHSRP
chr8107756822107756943+intron-Distal3.776486.66709HepG2CSTF2
chr8107643409107643497+intron-Distal3.939563.16986HepG2QKI
chr8107743759107743820+intron-Distal3.724055.32485HepG2SUGP2
chr8107736060107736084+intron-Distal3.535296.81985HepG2ILF3
chr8107703114107703178+intron-Distal4.408864.45977HepG2U2AF2
chr8107745300107745374+intron-Distal3.307615.10681HepG2SUGP2
chr8107740741107740833+intron-Distal3.521604.23286HepG2QKI
chr8107744839107744951+intron-Distal4.091597.95181HepG2SUGP2
chr8107693279107693341+intron-Distal4.062393.28841HepG2PTBP1
chr8107742026107742097+intron-Distal5.0061914.09948HepG2LSM11
chr8107741981107742004+intron-Distal4.871394.68272K562LSM11
chr8107670439107670590+intron-Distal,intron-Proximal4.079683.04182K562HNRNPM
chr8107742004107742022+intron-Distal5.533878.97652K562LSM11
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for OXR1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for OXR1 is not available on ENCORE database.

  • 78 RBPs can affect the levels of OXR1.  








The Knockdown/knockout RNA-Seq assay for OXR1 is not available on ENCORE database.





78 RBPs can affect the gene expression of OXR1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
OXR1ENSG00000164830.13382.28920629.16830-0.718804.863503.61670HepG2BCCIP
OXR1ENSG00000164830.13327.32000679.95650-1.0547013.0568011.88760HepG2BOP1
OXR1ENSG00000164830.13423.46580580.76290-0.455703.851802.64680HepG2YBX3
OXR1ENSG00000164830.13605.53740388.657600.639605.447604.01150HepG2CSTF2
OXR1ENSG00000164830.13652.13890903.28560-0.470005.244704.41200HepG2CELF1
OXR1ENSG00000164830.13806.60090971.22820-0.268002.636601.90970HepG2DAZAP1
OXR1ENSG00000164830.13764.16480603.619100.340102.160301.55260HepG2DDX21
OXR1ENSG00000164830.13332.04280618.59410-0.897607.141905.96900HepG2DDX55
OXR1ENSG00000164830.13545.20220728.14790-0.417402.798301.78110HepG2DDX5
OXR1ENSG00000164830.131036.78950740.523900.485406.155505.22180HepG2DKC1
OXR1ENSG00000164830.13343.71410565.23080-0.717609.806808.66800HepG2DNAJC2
OXR1ENSG00000164830.13375.34270531.45420-0.501703.178801.99130HepG2EFTUD2
OXR1ENSG00000164830.13631.82450963.79000-0.609201.828201.33340HepG2EIF2S1
OXR1ENSG00000164830.13811.84990570.064700.510004.858903.47460HepG2EIF3G
OXR1ENSG00000164830.13654.264001065.29730-0.703302.322101.73440HepG2EIF4A3
OXR1ENSG00000164830.131135.96290958.198300.245402.238501.47150HepG2EIF4G1
OXR1ENSG00000164830.13381.91100756.41480-0.9859014.0763012.27380HepG2EWSR1
OXR1ENSG00000164830.13341.77900462.54910-0.436502.934501.72740HepG2FAM120A
OXR1ENSG00000164830.13560.068201074.24720-0.939703.683002.89360HepG2FXR1
OXR1ENSG00000164830.13678.80210892.59890-0.395004.061502.96300HepG2HNRNPA2B1
OXR1ENSG00000164830.13498.99560640.39100-0.359902.093601.48060HepG2HNRNPC
OXR1ENSG00000164830.13598.63680884.70690-0.563508.780507.64450HepG2HNRNPL
OXR1ENSG00000164830.13528.69330636.15700-0.267001.866801.35980HepG2HNRNPU
OXR1ENSG00000164830.13581.269401013.37080-0.801902.847902.16440HepG2IGF2BP2
OXR1ENSG00000164830.13481.49670649.81320-0.432504.953603.99540HepG2ILF2
OXR1ENSG00000164830.13595.113701018.91560-0.775803.817302.83850HepG2LARP4
OXR1ENSG00000164830.13493.11520691.79960-0.488403.577902.28680HepG2LARP7
OXR1ENSG00000164830.13306.40000541.62080-0.821904.533603.20790HepG2METAP2
OXR1ENSG00000164830.13555.92750795.15710-0.516302.855901.39970HepG2NKRF
OXR1ENSG00000164830.13346.90930567.98490-0.711303.184502.00830HepG2NONO
OXR1ENSG00000164830.13782.07050598.785600.385202.394301.69710HepG2NSUN2
OXR1ENSG00000164830.13751.97590985.75570-0.390504.504703.76210HepG2PCBP1
OXR1ENSG00000164830.131011.74800724.650100.481402.567101.56560HepG2PCBP2
OXR1ENSG00000164830.13560.15080814.88380-0.540803.536301.52970HepG2PPIG
OXR1ENSG00000164830.13975.59920612.035100.6726011.269409.86110HepG2PRPF4
OXR1ENSG00000164830.13711.576901003.02400-0.495306.425605.66040HepG2PTBP1
OXR1ENSG00000164830.13337.87310975.92930-1.5303050.6887048.79830HepG2PUM1
OXR1ENSG00000164830.131492.87930975.211300.614209.324508.13010HepG2PUM2
OXR1ENSG00000164830.13469.49310699.39900-0.575002.534001.85870HepG2RAVER1
OXR1ENSG00000164830.13621.705901119.04050-0.8480015.9309014.89530HepG2RBM22
OXR1ENSG00000164830.13305.11360503.57700-0.722906.232505.35150HepG2RPS19
OXR1ENSG00000164830.13710.730201044.31200-0.555208.006307.08240HepG2SF3B4
OXR1ENSG00000164830.13428.18660660.66370-0.625708.635907.59920HepG2SMN1
OXR1ENSG00000164830.131672.454401263.902500.404006.351705.67700HepG2SRFBP1
OXR1ENSG00000164830.131317.744401090.021500.273602.694402.22650HepG2SRSF1
OXR1ENSG00000164830.13730.89000907.72520-0.312602.891202.25190HepG2SRSF5
OXR1ENSG00000164830.131038.23960886.778400.227401.913001.43830HepG2SRSF9
OXR1ENSG00000164830.131887.718101097.344700.7825022.2745021.12460HepG2SSB
OXR1ENSG00000164830.131251.34120979.714700.352903.608502.98380HepG2TAF15
OXR1ENSG00000164830.13504.48490658.18100-0.383702.258701.59450HepG2TARDBP
OXR1ENSG00000164830.13393.38140623.67140-0.664908.438507.53960HepG2TRIM56
OXR1ENSG00000164830.13708.98370950.70830-0.423302.532201.73290HepG2UBE2L3
OXR1ENSG00000164830.13527.61800720.43350-0.449404.017603.20000HepG2UPF1
OXR1ENSG00000164830.13482.29890695.54550-0.528205.204504.42640HepG2UTP3
OXR1ENSG00000164830.13443.62830606.20220-0.450402.406301.72610HepG2XRN2
OXR1ENSG00000164830.13768.90450603.969900.348203.502802.76080HepG2ZC3H8
OXR1ENSG00000164830.13316.50270792.33460-1.3239018.3050017.20490HepG2ZNF622
OXR1ENSG00000164830.13883.64670654.792800.432303.857402.93160K562CPSF6
OXR1ENSG00000164830.13668.90030841.32810-0.330902.256501.32170K562DDX3X
OXR1ENSG00000164830.13770.831601183.18970-0.618206.391405.45910K562DDX47
OXR1ENSG00000164830.13507.40080788.07820-0.635208.077506.72660K562EIF3G
OXR1ENSG00000164830.13624.99880879.02070-0.492003.756802.80490K562EIF4A3
OXR1ENSG00000164830.13418.12840914.15150-1.1285013.3121012.08510K562FXR1
OXR1ENSG00000164830.131455.18540957.959600.603102.669101.97770K562G3BP2
OXR1ENSG00000164830.13422.01350674.51790-0.676606.424405.55220K562HNRNPC
OXR1ENSG00000164830.13440.55750602.27950-0.451103.053201.84920K562HNRNPF
OXR1ENSG00000164830.13728.270601069.36800-0.554204.991103.52930K562HNRNPL
OXR1ENSG00000164830.13450.88360612.11560-0.441002.444501.57290K562HNRNPM
OXR1ENSG00000164830.13920.187401234.00050-0.423303.582202.61860K562MAGOH
OXR1ENSG00000164830.13947.139701231.57990-0.378902.998102.03370K562MATR3
OXR1ENSG00000164830.13345.30800610.23020-0.821508.774007.15030K562METAP2
OXR1ENSG00000164830.13656.67780843.58790-0.361403.503302.59780K562MTPAP
OXR1ENSG00000164830.13599.19050844.81690-0.495603.961502.95540K562PPIG
OXR1ENSG00000164830.13416.39060604.75760-0.538403.759902.68290K562PSIP1
OXR1ENSG00000164830.13921.232001198.86810-0.380003.166802.46110K562PTBP1
OXR1ENSG00000164830.131401.053701752.37520-0.322802.867702.03730K562PUF60
OXR1ENSG00000164830.131227.827001864.02610-0.602309.942007.85600K562PUM1
OXR1ENSG00000164830.131569.065301177.226800.414403.561402.95680K562PUS1
OXR1ENSG00000164830.131430.841901147.018900.318903.212702.58090K562RBM15
OXR1ENSG00000164830.13785.092901149.86870-0.550504.679803.55160K562RBM22
OXR1ENSG00000164830.13536.59950816.98140-0.606504.690503.34070K562RPS3
OXR1ENSG00000164830.13709.69680924.88210-0.382102.359901.60090K562SF3A3
OXR1ENSG00000164830.13344.74560522.98200-0.601204.259302.90590K562SRFBP1
OXR1ENSG00000164830.13600.26890788.72020-0.393902.832201.76520K562SRSF4
OXR1ENSG00000164830.13398.65430567.70810-0.510004.042203.04480K562SYNCRIP
OXR1ENSG00000164830.13833.606901189.54040-0.513003.456202.66140K562TARDBP
OXR1ENSG00000164830.13881.290801147.41150-0.380703.103602.22850K562TIA1
OXR1ENSG00000164830.13435.13660581.68640-0.418802.287701.44270K562TIAL1
OXR1ENSG00000164830.13857.681601125.64020-0.392203.230002.03530K562TRA2A
OXR1ENSG00000164830.13747.24930884.31460-0.243002.111201.36450K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for OXR1 is not available on ENCORE database.





17 RBPs can affect the splicing of OXR1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEOXR1ENSG00000164830.13chr8+107749747107749828107726050107726213107751685107751811-0.220000.000100.00307excludedK562SRSF1
SEOXR1ENSG00000164830.13chr8+107758016107758090107754449107754545107763033107764089-0.079000.004310.06738excludedK562SRSF1
SEOXR1ENSG00000164830.13chr8+107749747107749828107726050107726213107751685107751811-0.318000.000000.00003excludedK562AKAP8L
SEOXR1ENSG00000164830.13chr8+1077497471077498281077260501077262131077516851077518110.502000.000000.00000includedHepG2HNRNPK
SEOXR1ENSG00000164830.13chr8+107749747107749828107738334107738537107751685107751811-0.715000.000000.00006excludedHepG2AKAP1
SEOXR1ENSG00000164830.13chr8+1077138101077139711077049551077051051077151331077153180.126000.012630.09760includedK562AQR
SEOXR1ENSG00000164830.13chr8+107749747107749828107738334107738537107751685107751811-0.254000.000130.00209excludedK562AQR
SEOXR1ENSG00000164830.13chr8+107749747107749828107726050107726213107751685107751811-0.306000.000030.00083excludedK562PUS1
SEOXR1ENSG00000164830.13chr8+107758016107758090107754449107754545107763033107764089-0.115000.000160.00367excludedK562PUS1
SEOXR1ENSG00000164830.13chr8+1077497471077498281077260501077262131077516851077518110.253000.000430.02635includedHepG2PTBP1
SEOXR1ENSG00000164830.13chr8+107749747107749828107738334107738537107751685107751811-0.717000.000510.03615excludedHepG2FTO
SEOXR1ENSG00000164830.13chr8+1077497471077498281077260501077262131077516851077518110.332000.000080.00561includedHepG2MATR3
SEOXR1ENSG00000164830.13chr8+107749747107749828107738334107738537107751685107751811-0.179000.006080.09396excludedK562U2AF1
SEOXR1ENSG00000164830.13chr8+107749747107749828107726050107726213107751685107751811-0.301000.000000.00025excludedK562UTP18
SEOXR1ENSG00000164830.13chr8+107749747107749828107726050107726213107751685107751811-0.224000.000720.02925excludedK562HNRNPU
SEOXR1ENSG00000164830.13chr8+107749747107749828107726050107726213107751685107751811-0.232000.000430.01414excludedK562RBM15
SEOXR1ENSG00000164830.13chr8+107749747107749828107726050107726213107751685107751811-0.377000.000000.00000excludedK562AGGF1
SEOXR1ENSG00000164830.13chr8+107758016107758090107754449107754545107763033107764089-0.096000.000870.02475excludedK562AGGF1
SEOXR1ENSG00000164830.13chr8+107749747107749828107738334107738537107751685107751811-0.209000.000650.08546excludedK562ZC3H8
SEOXR1ENSG00000164830.13chr8+1077497471077498281077260501077262131077516851077518110.278000.000540.02814includedK562HNRNPK
SEOXR1ENSG00000164830.13chr8+1077497471077498281077260501077262131077516851077518110.285000.000040.00500includedHepG2SRSF9
SEOXR1ENSG00000164830.13chr8+1077497471077498281077260501077262131077516851077518110.402000.000000.00000includedK562PTBP1
SEOXR1ENSG00000164830.13chr8+107749747107749828107726050107726213107751685107751811-0.457000.000250.00595excludedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for OXR1 is not avaliable on ENCORE database.