MRPS34

General Information

Gene Name       : MRPS34
Gene ID             : ENSG00000074071.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: MRPS34)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MRPS34ENSG00000074071.1411.4938.0824.79ENCSR000AEF
HepG2MRPS34ENSG00000074071.14158.2355.84107.03ENCSR985KAT
K562MRPS34ENSG00000074071.14100.3647.3573.86ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MRPS34 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MRPS34 RNA is bound by 13 proteins.  







eCLIP assay for MRPS34 is not avaliable on ENCORE database.





13 proteins are bound to MRPS34 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1618221761822229-3'-UTR,CDS,intron-Distal3.076137.34382K562UCHL5
chr1618221731822237-3'-UTR,CDS,intron-Distal5.4884410.86196HepG2LARP4
chr1618219721822046-3'-UTR,intron-Distal3.643547.43667HepG2LARP4
chr1618221771822241-3'-UTR,CDS,intron-Distal3.149366.81934HepG2GRWD1
chr1618219571822084-3'-UTR,intron-Distal3.543803.50315HepG2UPF1
chr1618221711822245-3'-UTR,CDS,intron-Distal3.514348.51958K562PABPC4
chr1618230031823128-5'-UTR,CDS,intron-Distal4.4143616.10484K562DDX3X
chr1618230381823127-5'-UTR,CDS,intron-Distal5.1894324.71130HepG2DDX3X
chr1618222331822352-CDS,intron-Distal3.3974015.30126K562UCHL5
chr1618224051822436-CDS,intron-Distal3.530337.24294K562YBX3
chr1618228651822919-CDS,intron-Distal3.717544.67961HepG2RPS3
chr1618224521822458-CDS,intron-Distal3.170703.69775K562YBX3
chr1618227491822801-CDS,intron-Distal,intron-Proximal4.5903211.17766HepG2PRPF8
chr1618225751822655-CDS,intron-Distal,intron-Proximal3.618607.22920K562AQR
chr1618227601822805-CDS,intron-Distal,intron-Proximal5.8742311.60096HepG2AQR
chr1618228861822915-CDS,intron-Distal4.204863.15006K562RBM15
chr1618225731822621-CDS,intron-Distal,intron-Proximal3.990835.89850HepG2AQR
chr1618228511822884-CDS,intron-Distal3.323805.56979K562YBX3
chr1618226211822662-CDS,intron-Distal,intron-Proximal3.809486.04280HepG2PRPF8
chr1618229511823000-CDS,intron-Distal4.055968.24591HepG2GRWD1
chr1618230231823121-CDS,intron-Distal3.421245.38934HepG2NCBP2
chr1618225641822621-CDS,intron-Distal,intron-Proximal4.4767613.70516HepG2PRPF8
chr1618224811822522-CDS,intron-Distal,intron-Proximal3.066023.20367K562RBM15
chr1618229281822968-CDS,intron-Distal5.019606.75419HepG2DDX3X
chr1618226211822668-CDS,intron-Distal,intron-Proximal5.104436.38747HepG2AQR
chr1618222361822407-CDS,intron-Distal3.647289.19186K562ZNF800
chr1618227541822800-intron-Distal,intron-Proximal3.857385.35619K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MRPS34 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MRPS34 is not available on ENCORE database.

  • 102 RBPs can affect the levels of MRPS34.  








The Knockdown/knockout RNA-Seq assay for MRPS34 is not available on ENCORE database.





102 RBPs can affect the gene expression of MRPS34 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MRPS34ENSG00000074071.9208.27290308.26560-0.565702.318901.33460HepG2AATF
MRPS34ENSG00000074071.9586.46060709.90210-0.275602.068101.39160HepG2AKAP8L
MRPS34ENSG00000074071.9628.18200410.585500.613402.577201.67540HepG2BCCIP
MRPS34ENSG00000074071.9933.904401307.33720-0.485302.407901.84500HepG2BOP1
MRPS34ENSG00000074071.9302.18520479.46020-0.666005.294004.27000HepG2CALR
MRPS34ENSG00000074071.9647.193601200.14860-0.890905.734204.77720HepG2CPSF6
MRPS34ENSG00000074071.91060.45850724.862000.548805.086403.74860HepG2DDX5
MRPS34ENSG00000074071.9458.48380599.87560-0.387801.833301.31980HepG2DDX6
MRPS34ENSG00000074071.9310.06710234.630400.402102.462801.84140HepG2DNAJC2
MRPS34ENSG00000074071.9911.11500662.558300.459504.281802.83640HepG2EIF2S2
MRPS34ENSG00000074071.9405.16020623.55670-0.622006.392005.21120HepG2EIF4G1
MRPS34ENSG00000074071.9619.09610881.78710-0.510302.819502.04140HepG2FIP1L1
MRPS34ENSG00000074071.9384.21480640.99340-0.738405.477404.38150HepG2FUBP3
MRPS34ENSG00000074071.9357.45410220.608900.696203.671702.07920HepG2HNRNPA0
MRPS34ENSG00000074071.9841.55280604.032300.478303.587402.79800HepG2HNRNPK
MRPS34ENSG00000074071.9679.81240575.659500.239802.003601.41820HepG2HNRNPL
MRPS34ENSG00000074071.9343.19990269.712200.347502.031601.39200HepG2ILF2
MRPS34ENSG00000074071.9435.01680645.91450-0.570307.220805.62850HepG2KIF1C
MRPS34ENSG00000074071.91120.06120646.809100.792107.760506.74570HepG2MATR3
MRPS34ENSG00000074071.9852.879901324.31940-0.634803.405802.32250HepG2MTPAP
MRPS34ENSG00000074071.9661.44840454.841500.540202.911401.43990HepG2NKRF
MRPS34ENSG00000074071.9783.66460626.673400.322402.633201.88950HepG2NOL12
MRPS34ENSG00000074071.9400.73050589.54280-0.557003.652302.82970HepG2PABPC4
MRPS34ENSG00000074071.9486.72590605.33260-0.314602.399601.82500HepG2PCBP1
MRPS34ENSG00000074071.9415.34430235.505900.818408.309107.07910HepG2PPIL4
MRPS34ENSG00000074071.9307.25650553.10130-0.8481011.023909.62870HepG2PRPF4
MRPS34ENSG00000074071.9882.89370635.081900.475202.636002.05390HepG2PUM1
MRPS34ENSG00000074071.9549.87210719.74980-0.388403.884303.17890HepG2PUS1
MRPS34ENSG00000074071.9511.58010667.11430-0.383002.924702.28550HepG2QKI
MRPS34ENSG00000074071.9597.18830899.85300-0.591504.096903.49800HepG2RBM22
MRPS34ENSG00000074071.9375.33010605.42850-0.689806.729705.71860HepG2RBM25
MRPS34ENSG00000074071.9673.54400371.056100.860003.477802.35890HepG2RBM27
MRPS34ENSG00000074071.9565.97680685.48440-0.276401.906301.43830HepG2NELFE
MRPS34ENSG00000074071.9406.32440261.928800.633403.295202.42220HepG2RPS3A
MRPS34ENSG00000074071.9444.07700235.137900.9172011.2906010.12810HepG2SAFB2
MRPS34ENSG00000074071.9404.49660246.646200.713603.270001.85420HepG2SART3
MRPS34ENSG00000074071.9730.535001011.33550-0.469202.544401.89800HepG2SF3A3
MRPS34ENSG00000074071.9714.726601284.84610-0.846105.146204.20630HepG2SF3B1
MRPS34ENSG00000074071.9492.25840274.199500.8441010.847109.70680HepG2SMN1
MRPS34ENSG00000074071.9599.090201429.64950-1.254808.503607.13640HepG2SNRNP70
MRPS34ENSG00000074071.9586.320301016.30300-0.793606.172805.50630HepG2SRFBP1
MRPS34ENSG00000074071.9493.75700669.36080-0.439004.022103.47840HepG2SRSF1
MRPS34ENSG00000074071.9746.49900590.704100.337603.169002.50610HepG2SRSF5
MRPS34ENSG00000074071.9378.58600544.54460-0.524405.358504.63480HepG2SRSF9
MRPS34ENSG00000074071.9400.85640227.915200.814505.486103.88710HepG2STIP1
MRPS34ENSG00000074071.9946.04370671.766000.493807.376006.44100HepG2SUCLG1
MRPS34ENSG00000074071.9257.49370601.59570-1.2243019.8723018.56640HepG2TAF15
MRPS34ENSG00000074071.9819.223601265.74240-0.627703.463602.66320HepG2TARDBP
MRPS34ENSG00000074071.9312.15270552.83960-0.824609.383807.85930HepG2TIA1
MRPS34ENSG00000074071.9400.36230256.528000.642102.965402.44980HepG2TIAL1
MRPS34ENSG00000074071.9471.58720258.866200.8652010.499809.50700HepG2TRIM56
MRPS34ENSG00000074071.9733.67300584.496000.327802.288901.49950HepG2TUFM
MRPS34ENSG00000074071.9951.88980754.409700.335302.237301.66690HepG2U2AF1
MRPS34ENSG00000074071.91181.13230865.921200.447806.276805.43460HepG2UTP3
MRPS34ENSG00000074071.9534.73130986.41800-0.8834021.1868020.02200HepG2ZNF622
MRPS34ENSG00000074071.9994.312001511.65420-0.604403.012501.72880K562ABCF1
MRPS34ENSG00000074071.92096.793901350.584400.634506.108405.31670K562AGGF1
MRPS34ENSG00000074071.91079.57690810.540200.413404.595502.61520K562AKAP1
MRPS34ENSG00000074071.92053.231501484.264500.468004.311303.02680K562AKAP8
MRPS34ENSG00000074071.92151.183401405.387700.614107.682906.54510K562AKAP8L
MRPS34ENSG00000074071.91043.651501875.74020-0.845806.007005.19930K562AQR
MRPS34ENSG00000074071.92151.978901474.672000.545205.348304.03030K562ATP5C1
MRPS34ENSG00000074071.91210.839302321.78990-0.939203.441502.23220K562CNOT7
MRPS34ENSG00000074071.93178.613702353.500300.433503.025102.34720K562DDX47
MRPS34ENSG00000074071.91023.92730832.624600.298302.557001.31350K562DDX6
MRPS34ENSG00000074071.9532.80850356.012900.581605.091904.02580K562EIF3G
MRPS34ENSG00000074071.9736.372701155.09300-0.649503.182301.42480K562ESF1
MRPS34ENSG00000074071.9269.93660380.87320-0.496702.978101.31920K562FASTKD2
MRPS34ENSG00000074071.9412.74290677.75040-0.715505.731503.99840K562FKBP4
MRPS34ENSG00000074071.9502.732501011.88190-1.009203.821202.81020K562FMR1
MRPS34ENSG00000074071.996.82960335.72200-1.793705.526604.44850K562G3BP2
MRPS34ENSG00000074071.91313.765202110.97450-0.6842014.5109012.22220K562GLRX3
MRPS34ENSG00000074071.91105.724601392.43630-0.332602.295201.32280K562HNRNPA1
MRPS34ENSG00000074071.9385.87690779.77430-1.0149012.9018011.68940K562HNRNPC
MRPS34ENSG00000074071.91343.30610893.564600.588003.432102.38630K562HNRNPM
MRPS34ENSG00000074071.9825.67510500.509200.722103.367702.19460K562IGF2BP2
MRPS34ENSG00000074071.9708.97200508.906700.478203.197701.89180K562IGF2BP3
MRPS34ENSG00000074071.91104.406202120.63960-0.941206.171203.99290K562ILF2
MRPS34ENSG00000074071.91856.178901491.315500.315702.093001.38620K562KIF1C
MRPS34ENSG00000074071.9364.07020810.77160-1.155104.751003.48830K562KRR1
MRPS34ENSG00000074071.9537.62490755.75980-0.491303.200501.67880K562LARP7
MRPS34ENSG00000074071.9886.79940525.573000.754604.180803.14310K562MAGOH
MRPS34ENSG00000074071.91797.616201427.679300.332302.291801.34300K562MAK16
MRPS34ENSG00000074071.9837.03630524.439500.674402.124001.32520K562MATR3
MRPS34ENSG00000074071.92196.842801670.671300.394902.772401.86290K562MBNL1
MRPS34ENSG00000074071.91492.479402219.42070-0.5725013.6274012.00300K562MTPAP
MRPS34ENSG00000074071.9802.48630594.626900.432402.636101.38590K562NONO
MRPS34ENSG00000074071.91706.308802465.94020-0.5313017.0913015.44830K562NSUN2
MRPS34ENSG00000074071.91239.275702230.57090-0.847904.099302.56970K562PABPC1
MRPS34ENSG00000074071.9622.387701025.73430-0.720802.484001.69660K562PCBP3
MRPS34ENSG00000074071.9562.76150786.74870-0.483404.474203.45380K562POLR2G
MRPS34ENSG00000074071.91770.703601233.253300.521804.144503.11450K562PPIG
MRPS34ENSG00000074071.9971.24680510.660100.9274013.8980012.47030K562PTBP1
MRPS34ENSG00000074071.92197.530101393.448800.657104.251603.60050K562PUS1
MRPS34ENSG00000074071.92226.624901357.963000.713306.406505.53010K562RBM15
MRPS34ENSG00000074071.91324.736602071.69410-0.645104.354902.33630K562RPS3A
MRPS34ENSG00000074071.9594.30470391.213400.603103.893302.68150K562RPS3
MRPS34ENSG00000074071.9933.635902433.30650-1.3820058.0046055.02900K562SF3A3
MRPS34ENSG00000074071.9409.40180902.97110-1.141204.725203.43000K562SF3B1
MRPS34ENSG00000074071.9196.39810326.91030-0.735104.923002.64480K562SND1
MRPS34ENSG00000074071.91316.096602492.97990-0.9216038.6071035.92150K562SRPK2
MRPS34ENSG00000074071.9878.17200500.666900.810608.447807.21850K562SRSF1
MRPS34ENSG00000074071.9717.63330377.732100.9258010.993908.76520K562SRSF4
MRPS34ENSG00000074071.9727.55870472.965100.621203.684802.44000K562SRSF5
MRPS34ENSG00000074071.9903.478301304.01830-0.529402.862101.58510K562STAU1
MRPS34ENSG00000074071.9385.00410568.07120-0.561203.712502.51940K562SUPV3L1
MRPS34ENSG00000074071.9893.92290506.600500.819203.825402.98740K562TARDBP
MRPS34ENSG00000074071.9841.14730488.701500.783304.670903.56640K562TIA1
MRPS34ENSG00000074071.9439.65790672.48760-0.613102.921201.95820K562TIAL1
MRPS34ENSG00000074071.9760.46320479.814900.664303.070301.90880K562TRA2A
MRPS34ENSG00000074071.9173.23610335.69260-0.954402.920302.09490K562U2AF2
MRPS34ENSG00000074071.9409.33100601.32710-0.554904.037702.78360K562UCHL5
MRPS34ENSG00000074071.91984.600002614.69150-0.397807.455106.34600K562UPF1
MRPS34ENSG00000074071.9998.916501352.32680-0.437002.732201.53880K562UTP3
MRPS34ENSG00000074071.91379.801902237.30430-0.6973012.3286010.43410K562WDR3
MRPS34ENSG00000074071.91883.498502326.56850-0.304805.031603.92050K562WDR43
MRPS34ENSG00000074071.91594.725602222.13290-0.478606.107104.18980K562WRN
MRPS34ENSG00000074071.91506.533202113.21830-0.488205.832204.50580K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MRPS34 is not available on ENCORE database.





4 RBPs can affect the splicing of MRPS34 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSMRPS34ENSG00000074071.9chr16-1821890182253518218901822514182260418226470.196000.000000.00000longerHepG2SF3A3
A3SSMRPS34ENSG00000074071.9chr16-1821890182253518218901822514182260418226470.408000.000000.00000longerK562RBM22
A3SSMRPS34ENSG00000074071.9chr16-1821890182253518218901822514182260418226470.545000.000000.00000longerHepG2RBM22
A3SSMRPS34ENSG00000074071.9chr16-1821890182253518218901822514182260418226470.108000.000000.00000longerK562AQR
A3SSMRPS34ENSG00000074071.9chr16-1822604182273018226041822647182279918231510.157000.000000.00000longerK562AQR
A3SSMRPS34ENSG00000074071.9chr16-182189018225351821890182251418226041822647-0.053000.000650.08461shorterHepG2SFPQ

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MRPS34 is not avaliable on ENCORE database.