MRPS18B

General Information

Gene Name       : MRPS18B
Gene ID             : ENSG00000204568.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: MRPS18B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MRPS18BENSG00000204568.11137.48141.23139.35ENCSR000AEF
HepG2MRPS18BENSG00000204568.1174.2098.9886.59ENCSR985KAT
K562MRPS18BENSG00000204568.11211.10191.36201.23ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MRPS18B is not avaliable on ENCORE database.



Proteins bound to RNA
  • MRPS18B RNA is bound by 16 proteins.  







eCLIP assay for MRPS18B is not avaliable on ENCORE database.





16 proteins are bound to MRPS18B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr63059391430593993+3'-UTR3.201185.39249K562DDX6
chr63059391630593996+3'-UTR4.7528914.13271K562UPF1
chr63059408330594134+3'-UTR4.740984.40829K562ZC3H11A
chr63059330630593418+3'-UTR,CDS4.9800627.42870K562RPS3
chr63059351530593627+3'-UTR,CDS3.243073.20756HepG2UPF1
chr63059391930594063+3'-UTR3.7268510.42040K562NOLC1
chr63059344030593504+3'-UTR,CDS3.076013.85371K562SND1
chr63059407430594139+3'-UTR3.555485.65632K562UPF1
chr63059403230594072+3'-UTR5.1236726.82915K562PUM2
chr63059267630592764+3'-UTR,CDS,intron-Proximal4.257138.44604HepG2PRPF8
chr63059375330593810+3'-UTR3.590214.33455K562LIN28B
chr63059401830594064+3'-UTR3.339693.68457K562LIN28B
chr63059399630594074+3'-UTR4.2131713.25367K562UPF1
chr63059402030594068+3'-UTR5.3761912.20177HepG2SUB1
chr63059391030594001+3'-UTR5.6095710.97206K562LIN28B
chr63059389630593985+3'-UTR5.0306811.46459K562ZC3H11A
chr63059404630594139+3'-UTR3.329227.73756HepG2ZC3H11A
chr63059392630594061+3'-UTR4.328036.75470HepG2UPF1
chr63059327930593341+3'-UTR,CDS3.298263.46634K562IGF2BP1
chr63059362930593710+3'-UTR4.6938621.53027K562LIN28B
chr63059402430594073+3'-UTR3.195953.50122K562DDX55
chr63059403330594038+3'-UTR3.849043.65750K562YBX3
chr63059364030593696+3'-UTR6.0196411.46497HepG2LIN28B
chr63059406430594108+3'-UTR3.878579.96973K562PABPC4
chr63059393030594020+3'-UTR5.8721536.37389HepG2SUB1
chr63059391230594073+3'-UTR3.8857414.09607HepG2DDX55
chr63059388530593996+3'-UTR5.1686265.85984K562PABPC4
chr63059342830593518+3'-UTR,CDS5.1366427.42096K562RPS3
chr63059409930594133+3'-UTR4.090213.02060K562LIN28B
chr63059398530594059+3'-UTR3.791995.54337K562APOBEC3C
chr63059400530594064+3'-UTR4.9199118.95754K562PABPC4
chr63059407230594134+3'-UTR7.2507275.24006K562PUM2
chr63059400730594076+3'-UTR3.571723.98034K562DDX6
chr63058772230587800+CDS,intron-Proximal5.494285.68502HepG2PRPF8
chr63058733730587374+CDS4.618714.24959K562SND1
chr63058572030585781+intron-Proximal5.264276.75320K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MRPS18B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MRPS18B is not available on ENCORE database.

  • 96 RBPs can affect the levels of MRPS18B.  








The Knockdown/knockout RNA-Seq assay for MRPS18B is not available on ENCORE database.





96 RBPs can affect the gene expression of MRPS18B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MRPS18BENSG00000204568.7829.648001267.70290-0.611605.668504.42940HepG2BCLAF1
MRPS18BENSG00000204568.7825.576501012.49120-0.294402.128901.44640HepG2CALR
MRPS18BENSG00000204568.72501.211101957.036100.353902.908102.11560HepG2CIRBP
MRPS18BENSG00000204568.7803.745001350.95690-0.749205.231204.17440HepG2CNOT7
MRPS18BENSG00000204568.7400.11660661.49400-0.725306.423505.40970HepG2CPSF6
MRPS18BENSG00000204568.71442.105301174.251100.296303.003701.94070HepG2YBX3
MRPS18BENSG00000204568.7697.29890918.24960-0.397103.368001.87150HepG2DDX52
MRPS18BENSG00000204568.7472.22840751.17820-0.669703.214402.16270HepG2DDX59
MRPS18BENSG00000204568.7897.429401142.85890-0.348804.658103.84780HepG2DNAJC2
MRPS18BENSG00000204568.71355.041001969.38640-0.539405.213104.41410HepG2EIF2S1
MRPS18BENSG00000204568.7660.79950889.16940-0.428203.104602.15120HepG2EIF3D
MRPS18BENSG00000204568.72690.479702176.457500.305801.865501.33650HepG2EIF4A3
MRPS18BENSG00000204568.71180.660302118.98380-0.843808.164607.01220HepG2EIF4B
MRPS18BENSG00000204568.71631.530202504.78700-0.6185015.0648013.84240HepG2ETF1
MRPS18BENSG00000204568.7915.536801345.20700-0.555104.086703.16610HepG2FIP1L1
MRPS18BENSG00000204568.71502.747502195.79100-0.547105.612604.64920HepG2FXR1
MRPS18BENSG00000204568.71177.947202037.00410-0.790209.624608.42150HepG2G3BP1
MRPS18BENSG00000204568.71609.500102162.42860-0.426003.698102.65960HepG2G3BP2
MRPS18BENSG00000204568.7965.619001282.77940-0.409703.070901.99530HepG2GNB2L1
MRPS18BENSG00000204568.7980.819101178.69140-0.265102.665901.70420HepG2HDGF
MRPS18BENSG00000204568.7820.631001164.04290-0.504304.954304.12320HepG2HNRNPA1
MRPS18BENSG00000204568.7954.173101294.79710-0.440403.966703.14760HepG2HNRNPC
MRPS18BENSG00000204568.71017.217501286.23560-0.338504.109903.38280HepG2HNRNPU
MRPS18BENSG00000204568.71678.496202070.60070-0.302901.953301.37690HepG2IGF2BP2
MRPS18BENSG00000204568.7990.006501397.02330-0.496803.194401.84710HepG2KRR1
MRPS18BENSG00000204568.7997.084701338.27140-0.424602.591701.78950HepG2LARP4
MRPS18BENSG00000204568.7879.012401088.61140-0.308502.310701.56840HepG2MSI2
MRPS18BENSG00000204568.71602.591702260.93040-0.496504.412903.62070HepG2NCBP2
MRPS18BENSG00000204568.7806.451201324.84660-0.716205.741403.68610HepG2NKRF
MRPS18BENSG00000204568.71424.409702013.60520-0.499404.466303.56200HepG2PABPC4
MRPS18BENSG00000204568.7977.197101273.13480-0.381704.801703.72110HepG2PARN
MRPS18BENSG00000204568.71372.426402087.88720-0.6053014.5225013.30960HepG2PCBP1
MRPS18BENSG00000204568.7879.300901276.57370-0.537803.233902.11280HepG2PCBP2
MRPS18BENSG00000204568.7735.786801147.21680-0.6408010.222408.85540HepG2PPIL4
MRPS18BENSG00000204568.71558.573901278.816500.285303.229502.39980HepG2PRPF4
MRPS18BENSG00000204568.7789.779801106.52010-0.486503.769602.84420HepG2PRPF8
MRPS18BENSG00000204568.71276.152402124.44700-0.7353020.1435018.92690HepG2PTBP1
MRPS18BENSG00000204568.71572.353701959.92980-0.317902.737802.14420HepG2PUF60
MRPS18BENSG00000204568.71769.534502079.04880-0.232601.902601.34070HepG2PUM2
MRPS18BENSG00000204568.7945.716901257.51390-0.411106.036405.18910HepG2PUS1
MRPS18BENSG00000204568.71780.827802300.94870-0.369704.889604.09490HepG2QKI
MRPS18BENSG00000204568.7691.778701231.78130-0.832405.363404.39940HepG2RAVER1
MRPS18BENSG00000204568.71116.541602088.21340-0.9032018.9836017.31700HepG2RBM25
MRPS18BENSG00000204568.71352.607002364.35230-0.8057024.1524022.86960HepG2NELFE
MRPS18BENSG00000204568.71547.031302201.98790-0.5093010.718709.62790HepG2RECQL
MRPS18BENSG00000204568.7711.64240865.28590-0.282001.864001.35030HepG2RPS19
MRPS18BENSG00000204568.71096.827701397.65040-0.349702.587901.81250HepG2RPS2
MRPS18BENSG00000204568.7985.951201356.23390-0.460002.793501.99030HepG2RPS3A
MRPS18BENSG00000204568.71656.709401070.152100.630405.062904.13180HepG2SF3A3
MRPS18BENSG00000204568.7535.97800708.26600-0.402102.146301.51980HepG2SF3B1
MRPS18BENSG00000204568.71596.358802211.92460-0.470509.177208.19700HepG2SF3B4
MRPS18BENSG00000204568.71397.251601879.35670-0.427608.282807.16730HepG2SLBP
MRPS18BENSG00000204568.71106.872701335.76340-0.271203.361702.66380HepG2SMN1
MRPS18BENSG00000204568.71173.50780788.075500.574303.296702.43990HepG2SNRNP70
MRPS18BENSG00000204568.72015.514502364.59400-0.230402.868402.36050HepG2SRFBP1
MRPS18BENSG00000204568.71841.194202308.72910-0.326505.404204.79880HepG2SRSF1
MRPS18BENSG00000204568.71078.68730762.139200.501103.248402.15550HepG2SRSF3
MRPS18BENSG00000204568.71228.128701935.19750-0.6560015.1937013.89680HepG2SRSF5
MRPS18BENSG00000204568.71638.274301878.23860-0.197202.212301.70720HepG2SRSF9
MRPS18BENSG00000204568.71664.198202053.04820-0.302904.364603.75070HepG2SSB
MRPS18BENSG00000204568.71827.617202200.80790-0.268103.708003.00650HepG2SUCLG1
MRPS18BENSG00000204568.71689.132802075.06130-0.296903.611802.98670HepG2TAF15
MRPS18BENSG00000204568.71594.590601906.82010-0.258002.314401.54790HepG2TIA1
MRPS18BENSG00000204568.71019.841401260.99420-0.306203.408602.79710HepG2TRIM56
MRPS18BENSG00000204568.71462.531801914.83960-0.388804.015802.93870HepG2TUFM
MRPS18BENSG00000204568.71307.70310916.280800.513108.670807.70530HepG2UTP3
MRPS18BENSG00000204568.71324.912501043.785400.344005.107904.42140HepG2ZNF622
MRPS18BENSG00000204568.7810.495101230.90750-0.602804.359202.69750HepG2ZRANB2
MRPS18BENSG00000204568.72918.093604039.80860-0.469305.395204.62250K562AQR
MRPS18BENSG00000204568.72230.624902668.53720-0.258603.458002.37940K562BCLAF1
MRPS18BENSG00000204568.71029.585201417.67880-0.461504.007502.95550K562BOP1
MRPS18BENSG00000204568.71114.434001532.45480-0.459504.180502.82630K562CCAR1
MRPS18BENSG00000204568.71587.031202352.69020-0.568003.209302.05140K562CNOT7
MRPS18BENSG00000204568.71073.840501507.37290-0.489305.844604.71130K562CPSF6
MRPS18BENSG00000204568.71647.685402024.48230-0.297103.070401.95210K562CSTF2
MRPS18BENSG00000204568.71270.912601647.93090-0.374803.197201.74860K562DNAJC21
MRPS18BENSG00000204568.71701.881002180.57130-0.357602.925901.98780K562EFTUD2
MRPS18BENSG00000204568.72561.147003005.96110-0.231002.649501.94290K562EIF2S2
MRPS18BENSG00000204568.71692.197202334.73180-0.464403.595602.39990K562EIF3D
MRPS18BENSG00000204568.73554.604604097.64300-0.205102.444201.55750K562EIF4G2
MRPS18BENSG00000204568.71446.636201894.19590-0.388902.974001.79710K562FKBP4
MRPS18BENSG00000204568.71181.554001533.76730-0.376403.049802.14790K562FMR1
MRPS18BENSG00000204568.71010.644601300.02830-0.363302.454401.59500K562FTO
MRPS18BENSG00000204568.71022.544201733.21930-0.761307.157005.90690K562G3BP2
MRPS18BENSG00000204568.71559.951202069.69280-0.407905.678504.07680K562GLRX3
MRPS18BENSG00000204568.71414.593302182.19520-0.625409.636408.57700K562HNRNPC
MRPS18BENSG00000204568.73207.853502375.868700.433104.034202.50300K562HNRNPK
MRPS18BENSG00000204568.73044.734502438.277400.320403.255202.09960K562HNRNPL
MRPS18BENSG00000204568.72280.834701563.634900.544605.319203.97770K562HNRNPM
MRPS18BENSG00000204568.72732.199103373.69420-0.304303.956902.88270K562HNRNPU
MRPS18BENSG00000204568.73525.628102576.884300.452205.271604.19090K562HSPD1
MRPS18BENSG00000204568.71126.026401547.36420-0.458604.088502.27430K562KHDRBS1
MRPS18BENSG00000204568.73019.785502495.087100.275302.531001.65210K562MATR3
MRPS18BENSG00000204568.73591.994604367.65250-0.282102.346701.31110K562MSI2
MRPS18BENSG00000204568.71815.120302176.03110-0.261603.425802.53020K562MTPAP
MRPS18BENSG00000204568.72005.810302417.65900-0.269405.019004.05490K562NSUN2
MRPS18BENSG00000204568.72119.724102951.29820-0.477504.541403.47780K562PCBP3
MRPS18BENSG00000204568.71754.495502263.77590-0.367703.513402.60390K562POLR2G
MRPS18BENSG00000204568.72920.702602158.070400.436504.093403.07030K562PPIG
MRPS18BENSG00000204568.72978.097002429.237100.293802.950102.26690K562PTBP1
MRPS18BENSG00000204568.71977.062002384.38640-0.270301.942801.47260K562PUS1
MRPS18BENSG00000204568.71007.160601368.75870-0.442603.106902.07510K562SF3B1
MRPS18BENSG00000204568.71299.022701687.95110-0.377803.217601.84630K562SLBP
MRPS18BENSG00000204568.71585.489602174.43900-0.455704.329403.02960K562UCHL5
MRPS18BENSG00000204568.72097.142202563.50360-0.289704.337403.45690K562UPF1
MRPS18BENSG00000204568.72121.495702745.93200-0.372202.474501.34380K562UTP3
MRPS18BENSG00000204568.71772.300002193.49530-0.307602.865401.97320K562WDR3
MRPS18BENSG00000204568.73895.504704786.17220-0.297103.080001.71140K562WRN
MRPS18BENSG00000204568.73271.202104551.10480-0.476406.344104.95100K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MRPS18B is not available on ENCORE database.





10 RBPs can affect the splicing of MRPS18B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMRPS18BENSG00000204568.7chr6+305906083059067530587697305877663059265930592719-0.069000.000010.00034excludedK562SF3B4
SEMRPS18BENSG00000204568.7chr6+305906083059067530587697305877663059265930592719-0.051000.000860.03336excludedK562PRPF8
SEMRPS18BENSG00000204568.7chr6+305906083059067530587697305877663059265930592719-0.252000.000000.00000excludedHepG2U2AF1
SEMRPS18BENSG00000204568.7chr6+305906083059067530587697305877663059265930592719-0.066000.001330.08988excludedHepG2TBRG4
SEMRPS18BENSG00000204568.7chr6+305906083059067530587697305877663059265930592719-0.345000.000000.00000excludedHepG2U2AF2
SEMRPS18BENSG00000204568.7chr6+305906083059067530587269305877663059265930592719-0.159000.000000.00000excludedK562AQR
SEMRPS18BENSG00000204568.7chr6+305906083059067530587697305877663059265930592719-0.121000.000000.00000excludedK562U2AF1
SEMRPS18BENSG00000204568.7chr6+305906083059067530587269305877663059265930592719-0.234000.000000.00000excludedHepG2SF3A3
SEMRPS18BENSG00000204568.7chr6+305906083059067530587269305877663059265930592719-0.065000.000880.06151excludedHepG2TIAL1
SEMRPS18BENSG00000204568.7chr6+305906083059067530587697305877663059265930592719-0.120000.000000.00000excludedK562U2AF2
SEMRPS18BENSG00000204568.7chr6+305906083059067530587269305877663059265930592719-0.083000.000870.03605excludedK562SF3B1
SEMRPS18BENSG00000204568.7chr6+305906083059067530587269305877663059265930592719-0.131000.000000.00001excludedHepG2HNRNPC
SEMRPS18BENSG00000204568.7chr6+305906083059067530587269305877663059265930592719-0.158000.000000.00000excludedK562HNRNPC
A3SSMRPS18BENSG00000204568.7chr6+3059263530592817305926593059281730587697305877660.242000.000040.00037longerK562AQR
MXEMRPS18BENSG00000204568.7chr6+30587697305877663059060830590675305874573058758330592659305927190.163000.000600.034511includedK562SF3B1
MXEMRPS18BENSG00000204568.7chr6+30587697305877663059060830590675305874853058758330592659305927190.105000.000540.005321includedK562AQR
MXEMRPS18BENSG00000204568.7chr6+3059060830590675305926353059281730587269305877663059327830594172-0.085000.000000.000002includedK562AQR
MXEMRPS18BENSG00000204568.7chr6+3059060830590675305926593059281730587697305877663059327830594172-0.154000.000000.000002includedK562AQR
MXEMRPS18BENSG00000204568.7chr6+3059060830590675305926353059271930587697305877663059327830594172-0.116000.000220.002412includedK562AQR
MXEMRPS18BENSG00000204568.7chr6+3059060830590675305926053059271930587697305877663059327830594172-0.100000.001320.011582includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MRPS18B is not avaliable on ENCORE database.