MRPL16

General Information

Gene Name       : MRPL16
Gene ID             : ENSG00000166902.4
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: MRPL16)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MRPL16ENSG00000166902.472.9175.6274.27ENCSR000AEF
HepG2MRPL16ENSG00000166902.449.2255.3952.30ENCSR985KAT
K562MRPL16ENSG00000166902.4152.80140.64146.72ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MRPL16 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MRPL16 RNA is bound by 20 proteins.  







eCLIP assay for MRPL16 is not avaliable on ENCORE database.





20 proteins are bound to MRPL16 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr115957368159573716-3'-UTR,intron-Distal4.845464.51142K562DDX6
chr115957372059573777-3'-UTR,intron-Distal5.46034400.00000K562PUM2
chr115957377759573860-3'-UTR,CDS,intron-Distal6.80678400.00000K562PUM2
chr115957381059573857-3'-UTR,CDS,intron-Distal4.531344.66036K562PUM1
chr115957372159573810-3'-UTR,intron-Distal4.1295310.06277K562PUM1
chr115957370759573833-3'-UTR,CDS,intron-Distal3.708433.19473K562APOBEC3C
chr115957526859575334-3'-UTR,CDS,intron-Distal,intron-Proximal3.226118.21196K562BUD13
chr115957363759573794-3'-UTR,intron-Distal3.7582315.57217K562PABPC4
chr115957530959575351-3'-UTR,CDS,intron-Distal,intron-Proximal4.342336.48405K562AQR
chr115957422459574305-3'-UTR,CDS,intron-Distal3.107183.80299HepG2GRWD1
chr115957370159573833-3'-UTR,CDS,intron-Distal5.507509.36006HepG2LARP4
chr115957735759577448-5'-UTR,CDS,intron-Distal,intron-Proximal4.677817.56947K562SF3B4
chr115957734359577398-5'-UTR,CDS,intron-Distal,intron-Proximal3.141266.21720K562BUD13
chr115957731859577335-5'-UTR,CDS,intron-Distal,intron-Proximal5.7209629.00601K562PRPF8
chr115957812759578240-5'-UTR,CDS,intron-Distal4.3629716.89973K562DDX3X
chr115957814859578234-5'-UTR,intron-Distal3.058624.72677K562YBX3
chr115957723259577329-5'-UTR,CDS,intron-Distal,intron-Proximal3.893068.02891K562EFTUD2
chr115957733859577395-5'-UTR,CDS,intron-Distal,intron-Proximal3.456177.31049K562DDX3X
chr115957809659578172-5'-UTR,CDS,intron-Distal3.846563.31827HepG2GRWD1
chr115957807259578223-5'-UTR,CDS,intron-Distal4.402745.01580HepG2DDX3X
chr115957813259578213-5'-UTR,intron-Distal4.754905.21007K562SRSF1
chr115957728659577357-5'-UTR,CDS,intron-Distal,intron-Proximal4.424785.13777HepG2PRPF8
chr115957388159573967-CDS,intron-Distal,intron-Proximal3.7599716.33683K562UCHL5
chr115957807159578127-CDS,intron-Distal3.262507.46385K562DDX3X
chr115957388459573971-CDS,intron-Distal,intron-Proximal3.2042113.79011K562ZNF622
chr115957396959574043-CDS,intron-Distal,intron-Proximal4.712115.65349K562RBM15
chr115957391059574055-CDS,intron-Distal,intron-Proximal4.3911010.69378K562ZNF800
chr115957388059573981-CDS,intron-Distal,intron-Proximal3.881365.06180HepG2BCLAF1
chr115957388659573954-CDS,intron-Distal,intron-Proximal3.463826.76654K562GRWD1
chr115957416159574209-CDS,intron-Distal4.004593.48187K562RBM15
chr115957726059577320-intron-Distal,intron-Proximal3.525913.99381K562BUD13
chr115957721459577252-intron-Distal,intron-Proximal3.511486.35344K562PRPF8
chr115957725259577318-intron-Distal,intron-Proximal6.0612542.85706K562PRPF8
chr115957724659577317-intron-Distal,intron-Proximal4.5829910.81562K562AQR
chr115957731759577328-intron-Distal,intron-Proximal3.834485.35619K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MRPL16 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MRPL16 is not available on ENCORE database.

  • 82 RBPs can affect the levels of MRPL16.  








The Knockdown/knockout RNA-Seq assay for MRPL16 is not available on ENCORE database.





82 RBPs can affect the gene expression of MRPL16 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MRPL16ENSG00000166902.4420.38060517.65680-0.300302.062701.52280HepG2ACO1
MRPL16ENSG00000166902.4566.49990777.69320-0.457105.088104.20330HepG2AUH
MRPL16ENSG00000166902.4929.17580783.111500.246602.294601.61100HepG2DAZAP1
MRPL16ENSG00000166902.4338.59800449.75470-0.409602.255401.63500HepG2DDX21
MRPL16ENSG00000166902.4334.44900468.94750-0.487602.258901.55350HepG2DDX55
MRPL16ENSG00000166902.4374.15250606.67140-0.697304.780903.98880HepG2DDX6
MRPL16ENSG00000166902.4408.29240583.24930-0.514503.068202.44500HepG2EIF2S1
MRPL16ENSG00000166902.4598.68920892.92640-0.576707.987707.05690HepG2ETF1
MRPL16ENSG00000166902.4215.31550364.89770-0.761002.416401.47330HepG2FTO
MRPL16ENSG00000166902.4216.35110412.84720-0.932204.469403.66830HepG2GPKOW
MRPL16ENSG00000166902.4343.69930457.20260-0.411702.179401.55580HepG2HNRNPC
MRPL16ENSG00000166902.4315.70440454.18050-0.524704.468003.71370HepG2HNRNPU
MRPL16ENSG00000166902.4407.77280613.22580-0.588704.111703.30380HepG2IGF2BP2
MRPL16ENSG00000166902.4492.85630669.58760-0.442102.554701.94440HepG2NCBP2
MRPL16ENSG00000166902.4153.24710430.58870-1.4905010.067907.94050HepG2NONO
MRPL16ENSG00000166902.4327.03000596.34810-0.866707.738306.54610HepG2PABPC4
MRPL16ENSG00000166902.4357.87170605.73580-0.759209.944708.90860HepG2PCBP1
MRPL16ENSG00000166902.4246.71000361.78500-0.552302.647901.85680HepG2PRPF8
MRPL16ENSG00000166902.4460.60380616.33670-0.420203.771203.15440HepG2PTBP1
MRPL16ENSG00000166902.4428.40680741.27100-0.791009.023708.03130HepG2PUF60
MRPL16ENSG00000166902.4621.22720786.31840-0.340002.484601.84900HepG2PUM2
MRPL16ENSG00000166902.4545.39900746.31480-0.452504.318803.70910HepG2RBM22
MRPL16ENSG00000166902.4527.35080685.94190-0.379303.130202.56150HepG2NELFE
MRPL16ENSG00000166902.4499.45450638.82840-0.355102.829902.20690HepG2RECQL
MRPL16ENSG00000166902.4315.49910554.37260-0.813208.112307.03900HepG2RPLP0
MRPL16ENSG00000166902.4354.86640471.69070-0.410603.260902.57180HepG2SMN1
MRPL16ENSG00000166902.4609.87370842.92390-0.466905.820905.16850HepG2SRFBP1
MRPL16ENSG00000166902.4811.00280669.806500.275902.064301.63930HepG2SRSF1
MRPL16ENSG00000166902.4279.63490544.90930-0.9625014.3160013.23790HepG2SRSF9
MRPL16ENSG00000166902.4593.98490731.83790-0.301102.524602.02960HepG2SSB
MRPL16ENSG00000166902.4255.35790466.83870-0.870405.827804.90270HepG2SUPV3L1
MRPL16ENSG00000166902.4440.35750602.00330-0.451103.884103.23830HepG2TAF15
MRPL16ENSG00000166902.4301.14750441.35000-0.551504.233003.64270HepG2TIAL1
MRPL16ENSG00000166902.4485.48730382.528400.343802.307901.74990HepG2UTP3
MRPL16ENSG00000166902.4333.58170431.14350-0.370102.520301.87390HepG2ZC3H8
MRPL16ENSG00000166902.42378.009901450.357200.7132020.0142018.60440K562AGGF1
MRPL16ENSG00000166902.41826.030001509.158500.274902.107101.53430K562AKAP8L
MRPL16ENSG00000166902.42035.301702945.03350-0.533006.416805.58450K562AQR
MRPL16ENSG00000166902.42142.620801583.463000.436206.631905.13780K562ATP5C1
MRPL16ENSG00000166902.41162.725001461.91930-0.330402.323901.53070K562BOP1
MRPL16ENSG00000166902.4601.09270904.73910-0.589905.554703.93120K562CCAR1
MRPL16ENSG00000166902.42923.051402359.960600.308604.533303.09230K562CPEB4
MRPL16ENSG00000166902.41732.028302442.08630-0.495709.970608.82420K562DDX47
MRPL16ENSG00000166902.43048.977801623.987400.9087029.5231026.32970K562DKC1
MRPL16ENSG00000166902.41105.018501601.09490-0.535003.978902.41250K562EEF2
MRPL16ENSG00000166902.41891.003501460.070100.373005.462903.73200K562EIF2S1
MRPL16ENSG00000166902.42019.484202571.81350-0.348805.138104.20080K562EIF2S2
MRPL16ENSG00000166902.4461.93920920.28070-0.994407.215905.55060K562EIF3A
MRPL16ENSG00000166902.4706.375101656.26220-1.2294018.9952016.17320K562EIF3D
MRPL16ENSG00000166902.42712.199403776.96880-0.477809.617007.90220K562EIF4G2
MRPL16ENSG00000166902.41636.197401212.261600.432505.625003.65520K562EWSR1
MRPL16ENSG00000166902.4821.326901340.48540-0.706707.155905.61490K562FTO
MRPL16ENSG00000166902.42073.200601444.296100.521409.437908.39940K562FXR1
MRPL16ENSG00000166902.42017.003601550.920100.379002.963201.48670K562GEMIN5
MRPL16ENSG00000166902.41292.865301821.75570-0.494807.743705.91220K562GLRX3
MRPL16ENSG00000166902.4986.453901484.18080-0.589305.324904.22970K562GPKOW
MRPL16ENSG00000166902.44473.571103427.082700.384304.751603.76150K562GRSF1
MRPL16ENSG00000166902.4654.822801432.47810-1.1293023.3613021.70840K562HNRNPC
MRPL16ENSG00000166902.41196.021301599.23880-0.419104.499702.10720K562HNRNPH1
MRPL16ENSG00000166902.42869.893502206.952600.378804.267602.92600K562HNRNPL
MRPL16ENSG00000166902.41861.954601420.429800.390402.877701.92610K562HNRNPM
MRPL16ENSG00000166902.41676.161202315.13350-0.465907.414105.95490K562HNRNPU
MRPL16ENSG00000166902.41855.841301496.509100.310402.555301.42340K562IGF2BP3
MRPL16ENSG00000166902.4650.92840913.50230-0.488903.800602.06630K562KHDRBS1
MRPL16ENSG00000166902.42223.368601546.025500.524107.154605.77460K562MAGOH
MRPL16ENSG00000166902.42634.797801794.203800.554208.585606.80100K562MBNL1
MRPL16ENSG00000166902.42929.852404025.92610-0.458505.047503.52650K562MSI2
MRPL16ENSG00000166902.41643.595901915.33350-0.220702.565301.78530K562MTPAP
MRPL16ENSG00000166902.41644.117301257.605700.386502.254701.47820K562NAA15
MRPL16ENSG00000166902.41727.194702128.13560-0.301205.705904.68920K562NSUN2
MRPL16ENSG00000166902.41061.093201933.20610-0.8654011.8822010.16160K562PCBP3
MRPL16ENSG00000166902.45311.119103880.932600.452505.489303.55980K562PNPT1
MRPL16ENSG00000166902.4947.047601482.84570-0.646909.377407.93950K562POLR2G
MRPL16ENSG00000166902.42893.009901960.419700.561307.174205.73370K562PPIG
MRPL16ENSG00000166902.43361.445904121.00090-0.293902.607501.81610K562PUF60
MRPL16ENSG00000166902.42178.975001496.699500.541806.167305.39540K562PUS1
MRPL16ENSG00000166902.42130.861501458.284600.547109.511408.43560K562RBM15
MRPL16ENSG00000166902.41655.692001301.881800.346703.120301.31360K562RECQL
MRPL16ENSG00000166902.4780.992001533.34080-0.9733012.4931010.73030K562RPS19
MRPL16ENSG00000166902.4805.947701048.60110-0.379702.524501.57390K562RPS3
MRPL16ENSG00000166902.4873.849901366.00090-0.644507.426405.08440K562SDAD1
MRPL16ENSG00000166902.41848.468202151.37380-0.218902.868401.91810K562SRPK2
MRPL16ENSG00000166902.42126.424201472.600000.530007.522806.36500K562SRSF1
MRPL16ENSG00000166902.41220.703501687.84950-0.467506.052803.75690K562SRSF9
MRPL16ENSG00000166902.4855.213101457.44960-0.769108.620606.78510K562SUPV3L1
MRPL16ENSG00000166902.41791.948701487.318100.268702.399501.63540K562SYNCRIP
MRPL16ENSG00000166902.4818.312301258.21180-0.620703.107401.52840K562TAF15
MRPL16ENSG00000166902.41097.650301490.26320-0.441103.910903.06230K562TARDBP
MRPL16ENSG00000166902.4949.901701235.34340-0.379102.604601.69870K562TIAL1
MRPL16ENSG00000166902.41036.046001312.35630-0.341102.755801.81340K562TRIM56
MRPL16ENSG00000166902.4858.491801542.56120-0.8455011.744909.59420K562UCHL5
MRPL16ENSG00000166902.42933.461602219.030100.402604.859802.64890K562UPF2
MRPL16ENSG00000166902.42239.719301517.468600.561602.758201.46930K562UTP18
MRPL16ENSG00000166902.41628.893602007.80780-0.301704.662803.58700K562WDR43
MRPL16ENSG00000166902.42171.141003317.99930-0.611907.499605.95910K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MRPL16 is not available on ENCORE database.





7 RBPs can affect the splicing of MRPL16 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMRPL16ENSG00000166902.4chr11-5957620559576345595747085957532259577327595774950.057000.000010.02332includedK562RPS3
SEMRPL16ENSG00000166902.4chr11-5957620559576345595747085957532259577327595774950.215000.000050.00154includedHepG2U2AF1
SEMRPL16ENSG00000166902.4chr11-5957771259577924595773065957739359578076595783450.119000.000000.00000includedK562AQR
SEMRPL16ENSG00000166902.4chr11-5957771259577924595773275957739359578076595782460.067000.000610.01137includedK562PUS1
SEMRPL16ENSG00000166902.4chr11-5957620559576345595747085957532259577327595774950.065000.000000.00091includedK562SSB
SEMRPL16ENSG00000166902.4chr11-5957620559576345595747085957532259577327595774950.421000.000000.00000includedK562U2AF1
SEMRPL16ENSG00000166902.4chr11-5957620559576345595751905957532259577327595774950.103000.000000.00002includedK562HNRNPK
SEMRPL16ENSG00000166902.4chr11-5957620559576345595747085957532259577327595774950.065000.003170.04877includedK562HNRNPC
A3SSMRPL16ENSG00000166902.4chr11-5957517359575383595751735957532259577327595773930.092000.000000.00000longerK562AQR
A3SSMRPL16ENSG00000166902.4chr11-595762055957634959576205595763455957732759577495-0.356000.001610.06520shorterK562U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MRPL16 is not avaliable on ENCORE database.