MANSC1

General Information

Gene Name       : MANSC1
Gene ID             : ENSG00000111261.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MANSC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MANSC1ENSG00000111261.130.120.100.11ENCSR000AEF
HepG2MANSC1ENSG00000111261.136.9510.608.78ENCSR985KAT
K562MANSC1ENSG00000111261.134.455.815.13ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MANSC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MANSC1 RNA is bound by 2 proteins.  







eCLIP assay for MANSC1 is not avaliable on ENCORE database.





2 proteins are bound to MANSC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr121250300912503127-5'-UTR,intron-Distal4.649009.66125HepG2DDX3X
chr121248334312483381-CDS,intron-Distal3.887956.75303HepG2IGF2BP1
chr121248338112483433-CDS,intron-Distal4.221248.39478HepG2IGF2BP1
chr121248343812483492-CDS,intron-Distal4.129034.47310HepG2IGF2BP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MANSC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MANSC1 is not available on ENCORE database.

  • 99 RBPs can affect the levels of MANSC1.  








The Knockdown/knockout RNA-Seq assay for MANSC1 is not available on ENCORE database.





99 RBPs can affect the gene expression of MANSC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MANSC1ENSG00000111261.9400.09780257.115400.637804.188202.89740HepG2AATF
MANSC1ENSG00000111261.9258.23020464.35890-0.846606.081304.74560HepG2ABCF1
MANSC1ENSG00000111261.9263.88370196.006000.428902.227001.66940HepG2ACO1
MANSC1ENSG00000111261.9188.92730290.06760-0.618603.268202.18980HepG2ADAR
MANSC1ENSG00000111261.91264.62190383.212401.7224029.1913027.68710HepG2AKAP1
MANSC1ENSG00000111261.9494.13090310.129100.671904.620603.28640HepG2AKAP8
MANSC1ENSG00000111261.9496.86080317.071400.647904.357303.37990HepG2ASCC1
MANSC1ENSG00000111261.9584.39810347.819500.748506.985105.10100HepG2BUD13
MANSC1ENSG00000111261.91110.30650593.119000.904508.673606.95300HepG2CCAR1
MANSC1ENSG00000111261.9506.41010301.241200.749305.684404.60040HepG2CIRBP
MANSC1ENSG00000111261.9370.70430195.922100.919909.951808.84810HepG2CKAP4
MANSC1ENSG00000111261.9471.71600362.733400.378902.606801.98100HepG2CELF1
MANSC1ENSG00000111261.9235.87770390.00250-0.725406.384205.32420HepG2DAZAP1
MANSC1ENSG00000111261.9542.37000297.863900.8645010.174708.18290HepG2DDX1
MANSC1ENSG00000111261.9384.24980277.609900.468902.615601.72820HepG2DDX24
MANSC1ENSG00000111261.91200.21190367.078401.7090032.6388030.74910HepG2DDX3X
MANSC1ENSG00000111261.9276.08290404.98610-0.552802.747601.73880HepG2DDX5
MANSC1ENSG00000111261.9487.47300315.351500.628303.740003.03130HepG2DDX6
MANSC1ENSG00000111261.9478.43770261.240300.872905.092003.58580HepG2AGO1
MANSC1ENSG00000111261.9526.31750303.131700.795906.109905.24800HepG2EIF2S1
MANSC1ENSG00000111261.9164.82560267.91480-0.700804.194202.89640HepG2EIF3G
MANSC1ENSG00000111261.9591.12860326.176400.857705.789804.82080HepG2EIF4B
MANSC1ENSG00000111261.9283.54340445.44260-0.651706.064505.23290HepG2ETF1
MANSC1ENSG00000111261.9355.06490230.853600.621003.595102.24520HepG2FAM120A
MANSC1ENSG00000111261.91115.32670468.867701.2501015.8959014.30900HepG2FIP1L1
MANSC1ENSG00000111261.91135.20970510.554101.152706.233604.70970HepG2FTO
MANSC1ENSG00000111261.9622.50930333.005200.902506.762105.07800HepG2FUS
MANSC1ENSG00000111261.9613.44620313.545000.968209.323808.13800HepG2G3BP1
MANSC1ENSG00000111261.9764.02220577.770200.403002.310701.72250HepG2GPKOW
MANSC1ENSG00000111261.9498.79290313.854000.668203.541501.76620HepG2GTF2F1
MANSC1ENSG00000111261.9409.13220187.104601.1286015.0285013.05570HepG2HDGF
MANSC1ENSG00000111261.9213.60910294.86040-0.465102.108701.53630HepG2HNRNPA1
MANSC1ENSG00000111261.9468.77640358.435500.387102.672301.75150HepG2HNRNPA2B1
MANSC1ENSG00000111261.9397.19330230.385300.785704.958203.06680HepG2HNRNPAB
MANSC1ENSG00000111261.9511.83280327.994500.641904.689503.80260HepG2HNRNPC
MANSC1ENSG00000111261.9238.47670323.43410-0.439602.302201.43520HepG2HNRNPM
MANSC1ENSG00000111261.9511.46430325.824700.650407.005206.07670HepG2HNRNPU
MANSC1ENSG00000111261.9481.65850337.750100.512002.667101.46260HepG2HSPD1
MANSC1ENSG00000111261.9263.93410369.62900-0.485903.175802.40450HepG2IGF2BP1
MANSC1ENSG00000111261.9273.78670179.148400.611804.148402.91200HepG2KIF1C
MANSC1ENSG00000111261.9221.45670338.13810-0.610603.213602.50740HepG2MAGOH
MANSC1ENSG00000111261.9458.53210340.025000.431301.985201.44610HepG2MATR3
MANSC1ENSG00000111261.9518.57180348.030000.575203.550802.83730HepG2NCBP2
MANSC1ENSG00000111261.9504.60780386.727000.383702.640701.89610HepG2NOL12
MANSC1ENSG00000111261.9571.18760231.131801.305104.209601.38050HepG2NPM1
MANSC1ENSG00000111261.9130.06870255.08570-0.971704.511403.35920HepG2PABPC1
MANSC1ENSG00000111261.9450.58020309.922600.539803.128902.36350HepG2PABPC4
MANSC1ENSG00000111261.9507.83780322.489600.655006.729705.49810HepG2PARN
MANSC1ENSG00000111261.9273.94130168.597000.700203.378202.49350HepG2PRPF8
MANSC1ENSG00000111261.9485.93380369.171700.396402.361201.80420HepG2PUF60
MANSC1ENSG00000111261.9577.81960391.900200.560006.616405.78210HepG2PUM1
MANSC1ENSG00000111261.9327.62490199.638800.714605.906905.06730HepG2PUS1
MANSC1ENSG00000111261.9479.22210354.835900.433402.720702.10090HepG2QKI
MANSC1ENSG00000111261.9492.16820304.185000.694103.150902.40220HepG2RAVER1
MANSC1ENSG00000111261.9551.81550389.075000.504003.859402.86580HepG2RBM15
MANSC1ENSG00000111261.9444.53470322.028200.465002.806702.12770HepG2RBM25
MANSC1ENSG00000111261.9470.90070193.321001.284303.321201.52720HepG2RBM39
MANSC1ENSG00000111261.9165.07500404.41310-1.2927014.0947012.77630HepG2RPLP0
MANSC1ENSG00000111261.9184.84550321.28250-0.797504.961003.90950HepG2RPS2
MANSC1ENSG00000111261.9324.35680166.777400.959605.814404.71740HepG2RRP9
MANSC1ENSG00000111261.9151.45190290.15140-0.937907.418406.43690HepG2SAFB2
MANSC1ENSG00000111261.9526.36820252.249901.0611010.708208.91400HepG2SERBP1
MANSC1ENSG00000111261.9382.40690545.75610-0.513103.008202.27360HepG2SF3B1
MANSC1ENSG00000111261.9483.06140310.263400.638603.709102.58650HepG2SMNDC1
MANSC1ENSG00000111261.9778.77810189.427802.0395010.841108.00530HepG2SNRNP200
MANSC1ENSG00000111261.9957.95980607.248500.657604.030103.07840HepG2SNRNP70
MANSC1ENSG00000111261.9116.49210365.05750-1.6479023.4394022.26940HepG2SSB
MANSC1ENSG00000111261.9258.21570414.54340-0.682906.140405.28120HepG2SUCLG1
MANSC1ENSG00000111261.9500.53500319.996900.645306.009505.23580HepG2TAF15
MANSC1ENSG00000111261.9843.64010537.410400.650505.520604.54960HepG2TARDBP
MANSC1ENSG00000111261.9247.12070145.827200.760903.637502.51360HepG2TFIP11
MANSC1ENSG00000111261.9214.87350316.53640-0.558903.111402.58650HepG2TIAL1
MANSC1ENSG00000111261.9747.14110319.433901.2258026.9384025.40530HepG2TRIM56
MANSC1ENSG00000111261.91326.72680221.070002.5852015.5095013.07150HepG2U2AF2
MANSC1ENSG00000111261.9459.84680347.179600.405402.968202.24880HepG2UPF1
MANSC1ENSG00000111261.9467.13030335.188200.478801.929301.41070HepG2UTP3
MANSC1ENSG00000111261.9224.94780381.83100-0.763307.757206.96210HepG2ZNF622
MANSC1ENSG00000111261.9114.34590236.65800-1.049407.389406.52700K562AGGF1
MANSC1ENSG00000111261.9370.04080243.608300.603003.545402.12300K562APOBEC3C
MANSC1ENSG00000111261.9122.13810233.55600-0.935304.338503.63550K562AQR
MANSC1ENSG00000111261.9224.0694095.801501.225708.580106.44020K562CCAR1
MANSC1ENSG00000111261.9208.93110303.14230-0.537003.091201.91670K562CPEB4
MANSC1ENSG00000111261.9233.87170339.47830-0.537603.013301.99610K562CELF1
MANSC1ENSG00000111261.9181.96840265.02240-0.542403.085802.15340K562DKC1
MANSC1ENSG00000111261.9218.28260122.222800.836603.795802.26440K562EEF2
MANSC1ENSG00000111261.9285.83170185.439100.624104.010003.16900K562EIF2S2
MANSC1ENSG00000111261.953.6552092.08630-0.779302.190801.45680K562EIF4A3
MANSC1ENSG00000111261.9115.62250247.15050-1.096006.978405.76960K562GRSF1
MANSC1ENSG00000111261.9223.85880146.865100.608002.617702.03470K562HNRNPC
MANSC1ENSG00000111261.9158.7123096.727500.714302.790601.30150K562KHDRBS1
MANSC1ENSG00000111261.9188.47040313.56640-0.734404.593503.44460K562METAP2
MANSC1ENSG00000111261.9148.81200207.71470-0.481102.004801.31110K562MTPAP
MANSC1ENSG00000111261.9416.74470277.478500.586702.533001.36490K562PABPC1
MANSC1ENSG00000111261.9400.90560226.499800.823705.588404.40140K562PCBP3
MANSC1ENSG00000111261.9322.12720173.724900.890706.808405.56200K562POLR2G
MANSC1ENSG00000111261.982.76540137.58650-0.733202.812601.96560K562RBM22
MANSC1ENSG00000111261.9309.66230154.818701.000006.855005.16380K562SAFB
MANSC1ENSG00000111261.9254.16410160.053200.667103.355401.74090K562SDAD1
MANSC1ENSG00000111261.954.5599097.35780-0.835502.746401.89510K562SF3B4
MANSC1ENSG00000111261.9308.21950197.731400.640304.181002.29630K562SRSF9
MANSC1ENSG00000111261.9199.66790134.597000.568902.137201.32100K562TRIM56
MANSC1ENSG00000111261.9178.18670244.72460-0.457802.320601.65890K562UPF1
MANSC1ENSG00000111261.9147.06000247.60250-0.751602.737301.45640K562UTP18
MANSC1ENSG00000111261.9225.71390379.16600-0.748305.001903.38820K562UTP3
MANSC1ENSG00000111261.9178.25150263.15260-0.562002.968202.07010K562ZC3H8
MANSC1ENSG00000111261.9306.24820185.265600.725004.538702.20840K562ZNF800
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MANSC1 is not available on ENCORE database.





1 RBPs can affect the splicing of MANSC1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RIMANSC1ENSG00000111261.9chr12-1249602512496348124960251249610712496209124963480.186000.009760.05949includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MANSC1 is not avaliable on ENCORE database.