LAMTOR5

General Information

Gene Name       : LAMTOR5
Gene ID             : ENSG00000134248.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LAMTOR5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LAMTOR5ENSG00000134248.1398.98111.94105.46ENCSR000AEF
HepG2LAMTOR5ENSG00000134248.13148.67153.59151.13ENCSR985KAT
K562LAMTOR5ENSG00000134248.13165.80161.81163.81ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LAMTOR5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LAMTOR5 RNA is bound by 23 proteins.  







eCLIP assay for LAMTOR5 is not avaliable on ENCORE database.





23 proteins are bound to LAMTOR5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1110943949110944087-3'-UTR,intron-Distal3.7708018.91176HepG2LARP4
chr1110943882110943918-3'-UTR,intron-Distal6.56041400.00000K562PUM2
chr1110943953110944017-3'-UTR,intron-Distal3.642213.72790K562APOBEC3C
chr1110943940110944015-3'-UTR,intron-Distal3.143037.59501HepG2DDX55
chr1110943918110944002-3'-UTR,intron-Distal5.20818400.00000K562PUM2
chr1110944092110944136-3'-UTR,intron-Distal4.039536.57313K562PABPC4
chr1110944087110944139-3'-UTR,intron-Distal5.030358.18732HepG2LARP4
chr1110944013110944059-3'-UTR,intron-Distal4.443245.43878K562TIA1
chr1110943946110943998-3'-UTR,intron-Distal5.8811016.49232K562IGF2BP1
chr1110943939110944086-3'-UTR,intron-Distal3.432464.73068HepG2TIAL1
chr1110943896110943946-3'-UTR,intron-Distal3.950696.49446K562IGF2BP1
chr1110944137110944189-3'-UTR,CDS,intron-Distal4.237663.39506K562IGF2BP2
chr1110943944110944013-3'-UTR,intron-Distal3.9469513.67430K562TIA1
chr1110950223110950282-5'-UTR,CDS,intron-Distal3.3687711.07505K562PUM2
chr1110950132110950296-5'-UTR,CDS,intron-Distal,intron-Proximal3.535558.62177K562SRSF1
chr1110950205110950285-5'-UTR,CDS,intron-Distal4.1742028.22592K562DROSHA
chr1110948963110949003-5'-UTR,CDS,intron-Distal,intron-Proximal3.400563.28147K562GRWD1
chr1110950206110950297-5'-UTR,CDS,intron-Distal,intron-Proximal3.0858711.59086K562FTO
chr1110950251110950315-5'-UTR,CDS,intron-Distal,intron-Proximal4.186927.57003K562EIF3G
chr1110950206110950251-5'-UTR,CDS,intron-Distal3.207364.37582K562EIF3G
chr1110950206110950255-5'-UTR,CDS,intron-Distal5.3194216.08744K562DDX6
chr1110950217110950255-5'-UTR,CDS,intron-Distal3.765227.05666K562RPS3
chr1110950206110950303-5'-UTR,CDS,intron-Distal,intron-Proximal3.2163828.20658K562DDX3X
chr1110950206110950308-5'-UTR,CDS,intron-Distal,intron-Proximal5.0201922.63861HepG2DDX3X
chr1110948973110949034-5'-UTR,CDS,intron-Distal,intron-Proximal3.254966.21720K562BUD13
chr1110950255110950301-5'-UTR,CDS,intron-Distal,intron-Proximal4.864206.90365K562DDX6
chr1110950204110950304-5'-UTR,CDS,intron-Distal,intron-Proximal3.574259.23566K562DDX55
chr1110950255110950321-5'-UTR,CDS,intron-Distal,intron-Proximal4.0844416.46281K562RPS3
chr1110946452110946552-CDS,intron-Distal,intron-Proximal3.681374.88100K562AQR
chr1110946545110946626-CDS,intron-Distal4.322847.45053HepG2LARP4
chr1110948966110949001-CDS,intron-Distal3.461116.05482K562DROSHA
chr1110946639110946658-CDS,intron-Distal3.6726117.27430K562DDX3X
chr1110948962110948990-CDS,intron-Distal3.752958.20908K562FTO
chr1110948990110949001-CDS,intron-Distal3.468358.07117K562FTO
chr1110944175110944205-CDS,intron-Distal3.649506.19204K562YBX3
chr1110946621110946639-CDS,intron-Distal3.1297210.42320K562DDX3X
chr1110946540110946595-CDS,intron-Distal,intron-Proximal3.528755.97713K562SND1
chr1110946611110946707-CDS,intron-Distal,intron-Proximal3.9846011.47331K562SF3B4
chr1110948959110949001-CDS,intron-Distal3.317515.39249K562DDX6
chr1110946540110946573-CDS,intron-Distal,intron-Proximal4.3748818.71615K562YBX3
chr1110944156110944203-CDS,intron-Distal4.295974.03377HepG2LARP4
chr1110946538110946587-CDS,intron-Distal,intron-Proximal6.009517.43897K562RPS3
chr1110946571110946659-CDS,intron-Distal,intron-Proximal3.3458512.15656K562FTO
chr1110946573110946600-CDS,intron-Distal4.0433817.39152K562YBX3
chr1110946626110946658-CDS,intron-Distal3.408805.27408HepG2LARP4
chr1110946446110946514-intron-Distal,intron-Proximal4.232095.42080K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LAMTOR5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LAMTOR5 is not available on ENCORE database.

  • 92 RBPs can affect the levels of LAMTOR5.  








The Knockdown/knockout RNA-Seq assay for LAMTOR5 is not available on ENCORE database.





92 RBPs can affect the gene expression of LAMTOR5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LAMTOR5ENSG00000134248.9957.43870820.452600.222701.870501.35260HepG2ACO1
LAMTOR5ENSG00000134248.9236.33250447.62310-0.921507.641406.54480HepG2CPSF6
LAMTOR5ENSG00000134248.91647.778701377.462600.258402.482001.86670HepG2CELF1
LAMTOR5ENSG00000134248.9561.60740804.61040-0.518704.341202.74100HepG2DDX47
LAMTOR5ENSG00000134248.9561.20930784.92070-0.484005.243904.36510HepG2DKC1
LAMTOR5ENSG00000134248.9735.74740888.42140-0.272002.687402.04330HepG2DNAJC2
LAMTOR5ENSG00000134248.9523.537601466.72740-1.4862028.0846026.32250HepG2EIF2S1
LAMTOR5ENSG00000134248.9594.23300776.77000-0.386502.996801.87670HepG2EIF3G
LAMTOR5ENSG00000134248.9828.313301620.95640-0.9686012.2287010.91510HepG2EIF4A3
LAMTOR5ENSG00000134248.91071.219701578.13280-0.559003.764302.96780HepG2EIF4B
LAMTOR5ENSG00000134248.91226.706401461.22830-0.252402.858202.00940HepG2EIF4G1
LAMTOR5ENSG00000134248.9288.256901583.76880-2.45790123.66420120.77670HepG2ETF1
LAMTOR5ENSG00000134248.91280.178301635.32530-0.353202.452101.79940HepG2FXR1
LAMTOR5ENSG00000134248.91102.529101610.47460-0.546705.274004.03060HepG2G3BP2
LAMTOR5ENSG00000134248.9706.73330905.00580-0.356802.570901.94530HepG2HNRNPA1
LAMTOR5ENSG00000134248.9618.630501006.62450-0.702407.959406.82980HepG2HNRNPC
LAMTOR5ENSG00000134248.9747.76410999.97130-0.419305.208704.39750HepG2HNRNPU
LAMTOR5ENSG00000134248.91152.687601542.11100-0.419903.167402.45040HepG2IGF2BP2
LAMTOR5ENSG00000134248.91048.712301551.04700-0.564604.141802.89320HepG2KHSRP
LAMTOR5ENSG00000134248.91002.120101635.89550-0.707007.900106.80390HepG2MAGOH
LAMTOR5ENSG00000134248.91215.083001645.07610-0.437103.103402.43870HepG2MATR3
LAMTOR5ENSG00000134248.9134.79000493.85280-1.8734017.6257015.23200HepG2MTPAP
LAMTOR5ENSG00000134248.91169.739601683.84690-0.525604.521203.72120HepG2NCBP2
LAMTOR5ENSG00000134248.91236.197801468.83030-0.248802.295601.60100HepG2NOL12
LAMTOR5ENSG00000134248.9966.985301499.66770-0.633106.344705.26270HepG2PABPC4
LAMTOR5ENSG00000134248.91006.663901440.20280-0.516708.861807.87640HepG2PCBP1
LAMTOR5ENSG00000134248.9681.90700891.89930-0.387303.809802.95700HepG2PPIL4
LAMTOR5ENSG00000134248.9937.003801465.47210-0.6452012.2153011.22730HepG2PTBP1
LAMTOR5ENSG00000134248.91147.258401402.07840-0.289402.122301.59060HepG2PUF60
LAMTOR5ENSG00000134248.91211.449101487.25950-0.295902.835902.15760HepG2PUM2
LAMTOR5ENSG00000134248.91234.785701587.11720-0.362103.987203.25650HepG2QKI
LAMTOR5ENSG00000134248.91564.623401323.750700.241102.031601.56940HepG2RBM22
LAMTOR5ENSG00000134248.91064.462701440.42040-0.436404.556303.70820HepG2RBM25
LAMTOR5ENSG00000134248.91072.753301630.91990-0.6044011.6993010.73460HepG2NELFE
LAMTOR5ENSG00000134248.9885.176701518.99800-0.7791018.1563016.80500HepG2RECQL
LAMTOR5ENSG00000134248.9321.23260575.76660-0.841908.832407.80830HepG2RPS19
LAMTOR5ENSG00000134248.9540.57630920.52290-0.768008.633507.27780HepG2RPS2
LAMTOR5ENSG00000134248.9699.09190989.71960-0.501503.006102.17330HepG2RPS3A
LAMTOR5ENSG00000134248.9378.90050577.84220-0.608904.309703.14560HepG2SERBP1
LAMTOR5ENSG00000134248.9624.48420479.303700.381602.301101.65490HepG2SF3B1
LAMTOR5ENSG00000134248.91048.047101525.72430-0.541809.512608.51560HepG2SF3B4
LAMTOR5ENSG00000134248.91027.712001344.25780-0.387406.190005.20710HepG2SLBP
LAMTOR5ENSG00000134248.9834.302601038.54090-0.315903.692802.96790HepG2SMN1
LAMTOR5ENSG00000134248.9790.25950533.308600.567302.983802.17110HepG2SNRNP70
LAMTOR5ENSG00000134248.91835.685301495.150700.295904.268703.68590HepG2SRFBP1
LAMTOR5ENSG00000134248.91354.660301592.53460-0.233402.422201.97200HepG2SRSF1
LAMTOR5ENSG00000134248.9702.59480515.726000.446002.222001.33690HepG2SRSF3
LAMTOR5ENSG00000134248.91086.421001384.28000-0.349603.749903.04200HepG2SRSF5
LAMTOR5ENSG00000134248.91010.266101298.18500-0.361804.583003.95650HepG2SSB
LAMTOR5ENSG00000134248.9802.088401574.36610-0.9729032.0434030.32910HepG2SUCLG1
LAMTOR5ENSG00000134248.91151.478301431.45620-0.314003.168402.57400HepG2TAF15
LAMTOR5ENSG00000134248.91071.938101315.28770-0.295202.426401.64200HepG2TIA1
LAMTOR5ENSG00000134248.9648.60310971.76070-0.583307.197906.46070HepG2TIAL1
LAMTOR5ENSG00000134248.9814.95530980.33840-0.266602.406501.87330HepG2TRIM56
LAMTOR5ENSG00000134248.91127.211801369.67830-0.281102.332001.53660HepG2TUFM
LAMTOR5ENSG00000134248.9769.939801449.72180-0.9130010.929509.22410HepG2UBE2L3
LAMTOR5ENSG00000134248.9799.49950547.347500.546504.849003.83840HepG2UCHL5
LAMTOR5ENSG00000134248.92840.517001323.291301.1019039.7226037.62820K562AGGF1
LAMTOR5ENSG00000134248.92235.118501454.250400.620007.331705.53330K562AKAP8
LAMTOR5ENSG00000134248.93079.350101376.982301.1610020.8987018.77010K562AKAP8L
LAMTOR5ENSG00000134248.93366.798302123.761800.6647010.284409.26270K562AQR
LAMTOR5ENSG00000134248.92100.981601444.857100.540004.395803.21580K562ATP5C1
LAMTOR5ENSG00000134248.91629.392601338.329600.283802.514401.52270K562DDX3X
LAMTOR5ENSG00000134248.9815.486501542.02250-0.9191024.6838022.92660K562DDX47
LAMTOR5ENSG00000134248.91158.676901460.44830-0.333903.823002.99870K562EIF2S2
LAMTOR5ENSG00000134248.9336.49100743.53040-1.143808.993507.14050K562EIF3A
LAMTOR5ENSG00000134248.9843.218901089.70370-0.370003.357602.48530K562EIF3G
LAMTOR5ENSG00000134248.9800.482701037.60340-0.374302.602701.37630K562EXOSC5
LAMTOR5ENSG00000134248.91968.509201254.821100.649508.989707.36740K562FIP1L1
LAMTOR5ENSG00000134248.92609.022901946.159300.422804.884603.88180K562GRSF1
LAMTOR5ENSG00000134248.92019.320801073.177600.911905.170603.33070K562HNRNPA2B1
LAMTOR5ENSG00000134248.9766.989901251.72710-0.706608.148007.17300K562HNRNPC
LAMTOR5ENSG00000134248.91544.703401032.203900.581504.336203.15510K562HNRNPM
LAMTOR5ENSG00000134248.92517.818101461.190200.784905.095703.90850K562KIF1C
LAMTOR5ENSG00000134248.91431.392501749.72530-0.289702.431201.63990K562MAGOH
LAMTOR5ENSG00000134248.92118.196801398.825700.598502.682401.62690K562MAK16
LAMTOR5ENSG00000134248.92317.810801147.374401.014307.514505.78410K562NAA15
LAMTOR5ENSG00000134248.91917.97010938.557701.031006.421804.72900K562PABPN1
LAMTOR5ENSG00000134248.9766.617901012.38900-0.401203.581702.66400K562POLR2G
LAMTOR5ENSG00000134248.92083.970701424.608000.548706.440605.09890K562PPIG
LAMTOR5ENSG00000134248.91697.053601081.678400.649707.822806.55600K562PRPF8
LAMTOR5ENSG00000134248.91424.073201699.92240-0.255402.070501.48040K562PTBP1
LAMTOR5ENSG00000134248.94401.715301365.319001.6887057.8950055.29400K562PUS1
LAMTOR5ENSG00000134248.92870.182601330.521101.1091030.3208028.27680K562RBM15
LAMTOR5ENSG00000134248.9796.334701101.87090-0.468503.207402.32630K562RPS19
LAMTOR5ENSG00000134248.9745.336401034.74130-0.473303.429402.30430K562RPS3
LAMTOR5ENSG00000134248.9680.43930901.95670-0.406603.185502.02520K562SAFB
LAMTOR5ENSG00000134248.9680.22620932.56590-0.455203.536101.88980K562SDAD1
LAMTOR5ENSG00000134248.91882.66630858.237601.133206.171004.14960K562SF1
LAMTOR5ENSG00000134248.91002.989801329.48650-0.406605.022503.95000K562SF3A3
LAMTOR5ENSG00000134248.91641.60710985.784800.735703.113801.78180K562SNRNP200
LAMTOR5ENSG00000134248.9710.03180998.99150-0.492604.623203.20110K562SRSF4
LAMTOR5ENSG00000134248.9872.742201152.38330-0.401004.083602.22150K562SRSF9
LAMTOR5ENSG00000134248.91811.977502331.90560-0.363904.468602.60130K562SUCLG1
LAMTOR5ENSG00000134248.92251.049701179.048600.932904.871502.78220K562SUPT6H
LAMTOR5ENSG00000134248.9797.551701015.40570-0.348402.943302.09510K562SYNCRIP
LAMTOR5ENSG00000134248.9660.94950959.53360-0.537803.488201.48380K562TRNAU1AP
LAMTOR5ENSG00000134248.92440.090603013.39170-0.304502.911101.46910K562UBE2L3
LAMTOR5ENSG00000134248.91390.216701779.17540-0.355903.493701.60820K562UPF2
LAMTOR5ENSG00000134248.92766.620101384.563900.998603.297601.84280K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LAMTOR5 is not available on ENCORE database.





3 RBPs can affect the splicing of LAMTOR5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELAMTOR5ENSG00000134248.9chr1-110949654110949750110948939110949001110950207110950290-0.160000.000360.00596excludedHepG2U2AF2
SELAMTOR5ENSG00000134248.9chr1-110949654110949750110948939110949001110950207110950290-0.196000.000000.00007excludedHepG2SFPQ
SELAMTOR5ENSG00000134248.9chr1-1109496541109497501109489391109490011109502071109502900.081000.000000.00009includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LAMTOR5 is not avaliable on ENCORE database.