GALNT6

General Information

Gene Name       : GALNT6
Gene ID             : ENSG00000139629.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GALNT6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GALNT6ENSG00000139629.1516.6017.8117.20ENCSR000AEF
HepG2GALNT6ENSG00000139629.152.222.012.12ENCSR985KAT
K562GALNT6ENSG00000139629.154.855.775.31ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GALNT6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GALNT6 RNA is bound by 1 proteins.  







eCLIP assay for GALNT6 is not avaliable on ENCORE database.





1 proteins are bound to GALNT6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr125174620651746355-3'-UTR,intron-Distal5.5789310.90122K562UPF1
chr125174691251746955-3'-UTR,intron-Distal4.190133.69433K562UPF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GALNT6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GALNT6 is not available on ENCORE database.

  • 110 RBPs can affect the levels of GALNT6.  








The Knockdown/knockout RNA-Seq assay for GALNT6 is not available on ENCORE database.





110 RBPs can affect the gene expression of GALNT6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GALNT6ENSG00000139629.11152.3416055.118301.466606.138105.38130HepG2AKAP1
GALNT6ENSG00000139629.11116.0733045.598401.347905.161804.10560HepG2ASCC1
GALNT6ENSG00000139629.1112.1020033.36260-1.463002.460701.80640HepG2AUH
GALNT6ENSG00000139629.112.1537018.71580-3.119402.664702.07630HepG2BOP1
GALNT6ENSG00000139629.1158.85890117.07200-0.992103.990403.12620HepG2DAZAP1
GALNT6ENSG00000139629.11128.8541069.503300.890503.030802.32270HepG2DDX21
GALNT6ENSG00000139629.11116.4512045.379101.359504.977504.17100HepG2DDX6
GALNT6ENSG00000139629.1130.3650071.03810-1.226203.567102.77490HepG2DNAJC21
GALNT6ENSG00000139629.11118.3125070.394200.749001.914901.35390HepG2DNAJC2
GALNT6ENSG00000139629.1116.1936048.15130-1.572203.048702.37840HepG2EIF4A3
GALNT6ENSG00000139629.1138.71640115.51780-1.577107.216005.97860HepG2EIF4G1
GALNT6ENSG00000139629.1159.55560110.65520-0.893802.743001.93090HepG2EIF4G2
GALNT6ENSG00000139629.1113.0081038.31450-1.558502.921102.30640HepG2ETF1
GALNT6ENSG00000139629.11127.9652075.426000.762502.370301.33260HepG2FUS
GALNT6ENSG00000139629.1185.7091048.636500.817301.901201.32280HepG2FXR1
GALNT6ENSG00000139629.1153.2897019.486301.451302.996802.33410HepG2GPKOW
GALNT6ENSG00000139629.1188.5127042.554401.056502.912701.77120HepG2GRSF1
GALNT6ENSG00000139629.11134.9803071.718500.912203.266402.57220HepG2HNRNPA1
GALNT6ENSG00000139629.1127.1009079.76800-1.557504.546603.67270HepG2HNRNPC
GALNT6ENSG00000139629.119.1387031.81530-1.799703.011002.26500HepG2HNRNPF
GALNT6ENSG00000139629.112.7035018.59560-2.782102.440601.84420HepG2HNRNPLL
GALNT6ENSG00000139629.1140.1588079.24110-0.980502.880702.26280HepG2HNRNPU
GALNT6ENSG00000139629.1120.4113048.65370-1.253202.373101.76460HepG2MAGOH
GALNT6ENSG00000139629.1140.68680116.08950-1.512606.998105.79330HepG2NOL12
GALNT6ENSG00000139629.11109.4012042.020501.380404.735703.55180HepG2PABPC1
GALNT6ENSG00000139629.11114.0859044.074401.372006.211405.35790HepG2PCBP1
GALNT6ENSG00000139629.1136.8257075.03920-1.026902.454201.30280HepG2PRPF6
GALNT6ENSG00000139629.1151.33880110.82380-1.110103.895803.20190HepG2PUF60
GALNT6ENSG00000139629.1130.40830117.65150-1.9520010.697509.69160HepG2PUM1
GALNT6ENSG00000139629.1189.8029044.081501.026503.029902.32810HepG2RBM25
GALNT6ENSG00000139629.113.7619034.27540-3.187605.733404.80120HepG2RPLP0
GALNT6ENSG00000139629.1128.1322067.70210-1.267002.538001.62990HepG2RPS10
GALNT6ENSG00000139629.1138.2483090.09200-1.236003.532702.63040HepG2RPS2
GALNT6ENSG00000139629.1143.8493091.95640-1.068402.969601.85580HepG2RPS5
GALNT6ENSG00000139629.1137.4095070.57090-0.915702.368001.76530HepG2SAFB2
GALNT6ENSG00000139629.113.2971018.40960-2.481202.214801.57920HepG2SF3B1
GALNT6ENSG00000139629.1162.72660109.43090-0.802902.600601.98950HepG2SRSF5
GALNT6ENSG00000139629.1110.4339031.25810-1.583002.514001.84770HepG2SRSF7
GALNT6ENSG00000139629.1196.3480039.648101.280904.789804.10070HepG2SRSF9
GALNT6ENSG00000139629.113.2157031.39250-3.287205.848605.15590HepG2SSB
GALNT6ENSG00000139629.1172.38270124.44570-0.781802.780102.15720HepG2SUCLG1
GALNT6ENSG00000139629.11102.0058043.801201.219504.650303.95250HepG2TAF15
GALNT6ENSG00000139629.1133.6837077.01820-1.193103.609903.05480HepG2TIAL1
GALNT6ENSG00000139629.11125.2230077.684500.688702.553502.00720HepG2TRIM56
GALNT6ENSG00000139629.1115.2366041.37050-1.441102.871801.74940HepG2XPO5
GALNT6ENSG00000139629.113.9042025.80980-2.724803.989803.20760HepG2ZC3H8
GALNT6ENSG00000139629.11283.03340142.909600.985803.208201.34350K562ADAR
GALNT6ENSG00000139629.11208.33490293.52750-0.494602.607502.05320K562AGGF1
GALNT6ENSG00000139629.11643.82660348.532200.885305.581504.79850K562AQR
GALNT6ENSG00000139629.11377.80850274.590900.460303.050101.65840K562BCCIP
GALNT6ENSG00000139629.11391.21180265.291500.560304.402203.17400K562BCLAF1
GALNT6ENSG00000139629.11400.26980241.019300.731704.742202.81730K562BUD13
GALNT6ENSG00000139629.11376.36720229.834400.711405.042503.32140K562CIRBP
GALNT6ENSG00000139629.11580.64870396.542100.550103.458101.81920K562CKAP4
GALNT6ENSG00000139629.11703.95780260.758901.4327012.8975010.64520K562CNOT7
GALNT6ENSG00000139629.11416.84260212.188100.974109.190407.74190K562CPSF6
GALNT6ENSG00000139629.11344.29840201.263000.774505.710904.11620K562CSTF2
GALNT6ENSG00000139629.111487.05220540.461401.4601038.7936035.89730K562CELF1
GALNT6ENSG00000139629.1188.94980232.83770-1.388306.806603.88440K562DAZAP1
GALNT6ENSG00000139629.11754.65750441.687800.772703.869802.42660K562DDX21
GALNT6ENSG00000139629.11453.53070284.363700.673404.172702.10890K562DDX51
GALNT6ENSG00000139629.11250.61810156.657100.677803.429201.92910K562DHX30
GALNT6ENSG00000139629.11179.94910328.66340-0.869007.405205.85500K562DKC1
GALNT6ENSG00000139629.11572.68610272.392801.072009.036506.81180K562EEF2
GALNT6ENSG00000139629.11466.26210316.727400.557804.711803.80450K562EIF2S2
GALNT6ENSG00000139629.11680.09280439.515200.629706.764605.31760K562EIF4G2
GALNT6ENSG00000139629.11558.67510383.965500.540904.435602.78970K562EXOSC5
GALNT6ENSG00000139629.11459.59210248.733600.885708.104606.57190K562FIP1L1
GALNT6ENSG00000139629.11347.65800183.034700.925504.651803.43630K562FTO
GALNT6ENSG00000139629.11392.73380249.871900.652305.291603.74290K562GLRX3
GALNT6ENSG00000139629.11501.24160202.573501.3070015.6823013.75510K562GPKOW
GALNT6ENSG00000139629.11819.89750422.097200.9578012.4611010.83660K562GRSF1
GALNT6ENSG00000139629.11405.43540233.930900.793303.727901.62970K562HNRNPA0
GALNT6ENSG00000139629.11686.35120294.697701.2196019.8188017.33470K562HNRNPA1
GALNT6ENSG00000139629.11125.93820235.87590-0.905303.199701.85830K562HNRNPA2B1
GALNT6ENSG00000139629.11471.92330244.005800.951505.824703.56310K562HNRNPAB
GALNT6ENSG00000139629.11594.63040403.978500.557604.669102.23730K562HNRNPH1
GALNT6ENSG00000139629.11589.33430237.945501.308409.539006.91380K562ILF2
GALNT6ENSG00000139629.11282.07170146.200100.948006.262504.03490K562ILF3
GALNT6ENSG00000139629.11257.65060141.295600.866605.268903.22170K562KHDRBS1
GALNT6ENSG00000139629.11337.64390216.790200.639103.525101.31690K562KHSRP
GALNT6ENSG00000139629.11327.08020173.008900.918705.095703.77840K562KRR1
GALNT6ENSG00000139629.11207.12280310.27810-0.583102.629601.58970K562MAK16
GALNT6ENSG00000139629.11496.90980224.908501.1435014.5895012.37250K562MATR3
GALNT6ENSG00000139629.11209.00830363.11450-0.796905.765004.36450K562MBNL1
GALNT6ENSG00000139629.11280.82590197.740200.506002.289301.49410K562METAP2
GALNT6ENSG00000139629.11524.67920262.708900.9979013.8074012.16760K562MTPAP
GALNT6ENSG00000139629.11152.91570254.51690-0.735003.025302.09550K562NAA15
GALNT6ENSG00000139629.11764.81260291.886301.3896034.9813032.83580K562NSUN2
GALNT6ENSG00000139629.11618.74750250.512401.3044010.785808.38370K562PABPC1
GALNT6ENSG00000139629.1191.34870206.30370-1.175304.328703.01660K562PABPN1
GALNT6ENSG00000139629.11135.35400220.33350-0.703003.812802.21690K562PCBP1
GALNT6ENSG00000139629.11993.48230488.401201.0243012.5897010.82700K562PCBP3
GALNT6ENSG00000139629.11758.04880374.606401.0168013.6812011.96710K562POLR2G
GALNT6ENSG00000139629.11132.40580218.97100-0.725804.109903.31590K562PTBP1
GALNT6ENSG00000139629.11347.98750479.53850-0.462602.985802.13690K562PUF60
GALNT6ENSG00000139629.11671.14740499.760400.425303.351602.29370K562PUM2
GALNT6ENSG00000139629.11101.78050302.90170-1.5734014.1346012.94910K562PUS1
GALNT6ENSG00000139629.11405.23430232.546000.801104.150602.18680K562RPS3A
GALNT6ENSG00000139629.11489.58750261.710200.903505.858003.94180K562RRP9
GALNT6ENSG00000139629.11492.60990237.509801.052406.880604.36440K562SBDS
GALNT6ENSG00000139629.11358.58410219.033200.711103.429001.66730K562SERBP1
GALNT6ENSG00000139629.11439.43430288.027600.609305.137904.05340K562SF3A3
GALNT6ENSG00000139629.11336.65530192.705200.804804.626903.34980K562SF3B1
GALNT6ENSG00000139629.11410.41630154.133301.4128015.8916013.18090K562SLBP
GALNT6ENSG00000139629.11461.45870295.091400.644906.230804.89180K562SRPK2
GALNT6ENSG00000139629.11604.82520394.293900.617102.500601.39190K562SRSF7
GALNT6ENSG00000139629.11473.12830326.349000.535703.293101.78820K562SSRP1
GALNT6ENSG00000139629.11555.75380298.485000.896708.005105.81330K562STAU1
GALNT6ENSG00000139629.11576.33300232.444801.309908.137405.44280K562STIP1
GALNT6ENSG00000139629.11609.13730418.399100.541804.533202.64820K562SUCLG1
GALNT6ENSG00000139629.11523.77670247.764901.079909.755207.78340K562SUPV3L1
GALNT6ENSG00000139629.11252.69560375.75930-0.572403.932902.95230K562SYNCRIP
GALNT6ENSG00000139629.11384.82360188.081901.032707.662706.03680K562TIAL1
GALNT6ENSG00000139629.11313.24220199.795800.648702.319201.46490K562TRIM56
GALNT6ENSG00000139629.11559.20390290.948100.942509.116606.51330K562TRIP6
GALNT6ENSG00000139629.11421.77630262.301000.685204.266902.97550K562UCHL5
GALNT6ENSG00000139629.11483.97430309.493700.644906.441905.39910K562UPF1
GALNT6ENSG00000139629.11403.96450288.646100.484802.462801.33560K562UTP3
GALNT6ENSG00000139629.11510.70070264.823100.947302.749901.87470K562WDR3
GALNT6ENSG00000139629.11500.79130275.391500.8626011.431909.84500K562WDR43
GALNT6ENSG00000139629.11597.12430413.026000.531704.389502.75350K562WRN
GALNT6ENSG00000139629.11114.61460212.69150-0.892003.465501.64240K562XRCC6
GALNT6ENSG00000139629.11449.25230267.210000.749505.277203.40530K562XRN2
GALNT6ENSG00000139629.11715.59930392.593900.866008.254306.63520K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GALNT6 is not available on ENCORE database.





1 RBPs can affect the splicing of GALNT6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGALNT6ENSG00000139629.11chr12-5177609651776293517735695177366851777244517773660.555000.000080.02336includedK562MTPAP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GALNT6 is not avaliable on ENCORE database.