FANCE

General Information

Gene Name       : FANCE
Gene ID             : ENSG00000112039.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FANCE)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FANCEENSG00000112039.44.585.515.04ENCSR000AEF
HepG2FANCEENSG00000112039.46.046.296.17ENCSR985KAT
K562FANCEENSG00000112039.412.5112.2912.40ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FANCE is not avaliable on ENCORE database.



Proteins bound to RNA

  • FANCE RNA is bound by 5 proteins.  







eCLIP assay for FANCE is not avaliable on ENCORE database.





5 proteins are bound to FANCE RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr63543451835434562+3'-UTR4.392315.20626K562PUM2
chr63543451735434612+3'-UTR3.922395.24353K562UPF1
chr63543477035434844+3'-UTR6.5590318.32977K562PUM2
chr63542751835427575+CDS,intron-Proximal4.676803.70131HepG2PRPF8
chr63543395835434058+CDS,intron-Proximal4.730164.40745K562SF3B4
chr63542751535427581+CDS,intron-Proximal5.204126.75320K562AQR
chr63542345435423524+intron-Proximal4.798914.26208K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FANCE is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FANCE is not available on ENCORE database.

  • 76 RBPs can affect the levels of FANCE.  








The Knockdown/knockout RNA-Seq assay for FANCE is not available on ENCORE database.





76 RBPs can affect the gene expression of FANCE :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FANCEENSG00000112039.3117.49960172.05110-0.550202.342401.77530HepG2ACO1
FANCEENSG00000112039.3339.37240231.887700.549302.324701.83240HepG2AKAP1
FANCEENSG00000112039.3216.44170294.96490-0.446602.287901.65350HepG2AUH
FANCEENSG00000112039.379.27250132.75280-0.743802.319801.49910HepG2BCLAF1
FANCEENSG00000112039.347.28060121.74800-1.364605.738804.91560HepG2BOP1
FANCEENSG00000112039.3100.90870171.97590-0.769203.953903.18610HepG2CKAP4
FANCEENSG00000112039.379.83640162.23970-1.023003.848802.93990HepG2CNOT7
FANCEENSG00000112039.383.24380148.15590-0.831703.333002.23030HepG2DDX5
FANCEENSG00000112039.3111.33790183.41510-0.720202.830502.23090HepG2EIF2S1
FANCEENSG00000112039.374.77790132.56320-0.826002.910801.98690HepG2EIF3D
FANCEENSG00000112039.3126.66180202.67020-0.678202.714802.08160HepG2EIF4A3
FANCEENSG00000112039.389.73940197.37580-1.137105.023304.11550HepG2EIF4B
FANCEENSG00000112039.3143.52160228.34400-0.669902.722701.89130HepG2EIF4G1
FANCEENSG00000112039.342.84940111.96720-1.385703.299202.18670HepG2FTO
FANCEENSG00000112039.3127.12390192.83300-0.601102.176101.56920HepG2IGF2BP2
FANCEENSG00000112039.373.70340193.98370-1.396107.196405.49700HepG2KHSRP
FANCEENSG00000112039.3135.75040205.76640-0.600102.146501.58680HepG2MATR3
FANCEENSG00000112039.3124.76310187.50980-0.587802.200001.55060HepG2PABPC4
FANCEENSG00000112039.3125.19760198.25100-0.663103.399102.80600HepG2PTBP1
FANCEENSG00000112039.3174.85530283.07290-0.695004.184803.58180HepG2RBM22
FANCEENSG00000112039.3116.02600194.88870-0.748203.660102.89150HepG2RBM25
FANCEENSG00000112039.396.51510204.69860-1.084706.128205.16810HepG2RPLP0
FANCEENSG00000112039.384.74760129.00500-0.606201.851301.33870HepG2RPS19
FANCEENSG00000112039.3105.10510162.84120-0.631602.079301.38540HepG2RPS3A
FANCEENSG00000112039.342.92590114.61880-1.416905.185404.14230HepG2RRP9
FANCEENSG00000112039.379.44160129.45270-0.704502.448301.56210HepG2SERBP1
FANCEENSG00000112039.352.18020119.66060-1.197404.465803.58690HepG2SF3B1
FANCEENSG00000112039.3117.37060319.71070-1.4457016.4868015.53280HepG2SRFBP1
FANCEENSG00000112039.3156.36220215.46710-0.462601.829701.42270HepG2SRSF1
FANCEENSG00000112039.3133.23630186.69810-0.486701.988201.38740HepG2SRSF7
FANCEENSG00000112039.3114.79610175.28010-0.610602.111801.61620HepG2SRSF9
FANCEENSG00000112039.342.92860130.16370-1.600306.465604.67260HepG2STAU1
FANCEENSG00000112039.375.55840131.59460-0.800402.945201.97720HepG2SUPT6H
FANCEENSG00000112039.3285.74210193.625500.561302.983502.40440HepG2TAF15
FANCEENSG00000112039.3259.11990155.210800.739302.345201.36250HepG2TBRG4
FANCEENSG00000112039.3113.12520166.75190-0.559802.194701.62860HepG2U2AF1
FANCEENSG00000112039.3107.67050164.17310-0.608602.578901.90140HepG2UPF1
FANCEENSG00000112039.3117.95510166.40270-0.496401.921501.34720HepG2ZC3H8
FANCEENSG00000112039.3427.89800613.18920-0.519103.603902.18660K562ABCF1
FANCEENSG00000112039.3524.06910736.06070-0.490103.143802.52570K562AQR
FANCEENSG00000112039.3641.11160782.76330-0.288002.117901.32600K562ATP5C1
FANCEENSG00000112039.3162.83100258.73700-0.668103.150602.21820K562BOP1
FANCEENSG00000112039.3340.00880504.44100-0.569102.347601.38450K562CNOT7
FANCEENSG00000112039.3476.83060636.39020-0.416403.540402.27990K562CPEB4
FANCEENSG00000112039.3177.05770275.07990-0.635602.970802.15820K562CPSF6
FANCEENSG00000112039.3253.86080351.56980-0.469802.664501.62710K562CSTF2
FANCEENSG00000112039.3806.907001092.04930-0.436604.488403.23660K562CELF1
FANCEENSG00000112039.3245.79210352.66020-0.520802.752901.41330K562DNAJC21
FANCEENSG00000112039.3305.36220430.28260-0.494802.784301.86820K562EFTUD2
FANCEENSG00000112039.3300.20870460.72490-0.617903.425702.26410K562EIF3D
FANCEENSG00000112039.3434.76520334.261200.379202.117701.39520K562EIF4A3
FANCEENSG00000112039.3281.30610427.18910-0.602703.658502.33580K562FKBP4
FANCEENSG00000112039.3181.67420279.94870-0.623802.838801.97240K562FMR1
FANCEENSG00000112039.3115.30480237.30840-1.041305.781504.40680K562FTO
FANCEENSG00000112039.3481.55670347.619900.470102.819602.20970K562FXR1
FANCEENSG00000112039.3132.87590266.20760-1.002503.421402.61900K562G3BP2
FANCEENSG00000112039.3376.00810495.77100-0.398902.385101.33420K562GLRX3
FANCEENSG00000112039.3500.22820654.01880-0.386702.777101.70260K562HNRNPA1
FANCEENSG00000112039.3323.64780439.30290-0.440802.518201.43800K562HNRNPF
FANCEENSG00000112039.3214.79470396.96040-0.886008.075205.08710K562HNRNPH1
FANCEENSG00000112039.3255.60960393.17140-0.621202.767001.53220K562HNRNPK
FANCEENSG00000112039.3542.17450724.30580-0.417803.707402.67260K562HNRNPU
FANCEENSG00000112039.3232.28270342.66370-0.560902.938801.39940K562ILF3
FANCEENSG00000112039.3104.71270224.30120-1.099005.086103.77140K562KRR1
FANCEENSG00000112039.3536.74870413.801700.375202.418801.63000K562MAGOH
FANCEENSG00000112039.3720.85130946.55710-0.393002.895801.73440K562MSI2
FANCEENSG00000112039.3387.99850521.22590-0.425902.637801.84740K562MTPAP
FANCEENSG00000112039.3266.81680479.86460-0.846806.678005.38360K562PCBP3
FANCEENSG00000112039.3231.37280368.07310-0.669804.706903.66160K562POLR2G
FANCEENSG00000112039.3778.818301009.77530-0.374703.776702.65200K562PUM2
FANCEENSG00000112039.3142.83730249.84220-0.806603.903202.73610K562SF3B1
FANCEENSG00000112039.3232.58120361.17700-0.635003.889002.36840K562SLBP
FANCEENSG00000112039.3287.64410394.17870-0.454602.598201.91040K562SRSF1
FANCEENSG00000112039.3357.14270472.52890-0.403902.889101.69270K562SRSF7
FANCEENSG00000112039.3298.81680528.95810-0.823906.792204.76540K562STAU1
FANCEENSG00000112039.3284.77330405.43490-0.509702.538901.57050K562SUPV3L1
FANCEENSG00000112039.3483.23900369.186100.388302.408301.64230K562SYNCRIP
FANCEENSG00000112039.3500.53340384.770700.379402.270801.53610K562TIA1
FANCEENSG00000112039.3297.41320424.20840-0.512302.766101.82970K562TIAL1
FANCEENSG00000112039.3345.09010515.53890-0.579104.029202.27600K562TRIP6
FANCEENSG00000112039.3165.89540257.70620-0.635502.438901.42400K562U2AF1
FANCEENSG00000112039.3156.24730266.26410-0.769003.403102.51470K562U2AF2
FANCEENSG00000112039.3276.89630429.08830-0.631904.023902.77340K562UCHL5
FANCEENSG00000112039.3388.78730525.50290-0.434702.171701.39770K562WDR3
FANCEENSG00000112039.3401.09390546.39880-0.446002.943702.07080K562WDR43
FANCEENSG00000112039.3674.22000872.12280-0.371302.814101.50790K562WRN
FANCEENSG00000112039.3570.82340829.18380-0.538604.991203.77720K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FANCE is not available on ENCORE database.





6 RBPs can affect the splicing of FANCE :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFANCEENSG00000112039.3chr6+354283283542839535427458354275373543402035434880-0.513000.000260.05907excludedK562SAFB
SEFANCEENSG00000112039.3chr6+354305653543069135428328354283953543402035434880-0.085000.006610.08614excludedK562HNRNPC
A3SSFANCEENSG00000112039.3chr6+3542743035427537354274583542753735427107354272310.054000.004680.02724longerK562AQR
A5SSFANCEENSG00000112039.3chr6+3542533235425565354253323542537735425692354257610.380000.002630.04260longerK562AQR
MXEFANCEENSG00000112039.3chr6+3542832835428395354305653543069135427458354275373543402035434880-0.151000.000090.007202includedK562LIN28B
MXEFANCEENSG00000112039.3chr6+3542832835428395354305653543069135427458354275373543402035434880-0.205000.003720.028042includedK562AQR
MXEFANCEENSG00000112039.3chr6+3542832835428395354305653543069135427458354275373543402035434880-0.133000.001850.081972includedK562LARP7
MXEFANCEENSG00000112039.3chr6+3542832835428395354305653543069135427458354275373543402035434880-0.200000.000020.002292includedK562SBDS
MXEFANCEENSG00000112039.3chr6+3542832835428395354305653543069135427458354275373543402035434880-0.128000.000590.031492includedK562SAFB

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FANCE is not avaliable on ENCORE database.