DDT

General Information

Gene Name       : DDT
Gene ID             : ENSG00000099977.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DDT)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DDTENSG00000099977.1411.1022.4416.77ENCSR000AEF
HepG2DDTENSG00000099977.1477.9528.7853.37ENCSR985KAT
K562DDTENSG00000099977.1433.0616.1724.62ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DDT is not avaliable on ENCORE database.



Proteins bound to RNA
  • DDT RNA is bound by 9 proteins.  







eCLIP assay for DDT is not avaliable on ENCORE database.





9 proteins are bound to DDT RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr222431359624313694-3'-UTR,intron-Distal3.052245.38769HepG2YBX3
chr222431370324313725-3'-UTR,intron-Distal5.2822237.14309HepG2LARP4
chr222431364924313690-3'-UTR,intron-Distal3.268904.61081K562GTF2F1
chr222431372524313746-3'-UTR,CDS,intron-Distal4.9172227.52817HepG2LARP4
chr222431369824313750-3'-UTR,CDS,intron-Distal3.363466.41785HepG2HNRNPL
chr222431358724313653-3'-UTR,intron-Distal3.284848.21279K562HNRNPL
chr222431370124313751-3'-UTR,CDS,intron-Distal3.6209413.46246K562HNRNPL
chr222431365124313698-3'-UTR,intron-Distal3.514617.23547HepG2HNRNPL
chr222431363124313737-3'-UTR,intron-Distal4.623926.37354HepG2LIN28B
chr222431358624313630-3'-UTR,intron-Distal5.0025311.52455K562PABPC4
chr222431363724313701-3'-UTR,intron-Distal5.2404329.24752HepG2AGGF1
chr222431365324313701-3'-UTR,intron-Distal4.1419012.29001K562HNRNPL
chr222431359224313649-3'-UTR,intron-Distal5.158368.00387K562GTF2F1
chr222431357824313651-3'-UTR,intron-Distal5.0959315.50058HepG2HNRNPL
chr222431370124313749-3'-UTR,CDS,intron-Distal6.1083359.93634K562AGGF1
chr222431358824313642-3'-UTR,intron-Distal5.5472218.62309HepG2LARP4
chr222431358124313637-3'-UTR,intron-Distal5.0340210.16445HepG2AGGF1
chr222431361724313730-3'-UTR,intron-Distal4.983595.68371K562AKAP8L
chr222431364224313700-3'-UTR,intron-Distal5.2367631.43022HepG2LARP4
chr222431357724313656-3'-UTR,intron-Distal6.1033459.93634K562AGGF1
chr222431370724313740-3'-UTR,intron-Distal4.2698116.91650K562TIA1
chr222431370124313751-3'-UTR,CDS,intron-Distal3.8793514.09164HepG2AGGF1
chr222431374924313836-CDS,intron-Distal6.6358749.24928K562AGGF1
chr222431375724313806-CDS,intron-Distal5.4739122.36409HepG2LARP4
chr222431375624313783-CDS,intron-Distal4.6427310.06233HepG2AGGF1
chr222431595524315992-CDS,intron-Distal,intron-Proximal5.528808.76030HepG2LARP4
chr222431380524313828-CDS,intron-Distal3.676975.45345K562HNRNPL
chr222431374624313757-CDS,intron-Distal4.041906.31568HepG2LARP4
chr222431378324313804-CDS,intron-Distal4.6438010.51910HepG2AGGF1
chr222431378224313805-CDS,intron-Distal3.492409.91670K562HNRNPL
chr222431380524313833-CDS,intron-Distal3.452143.49615HepG2AGGF1
chr222431386324313945-intron-Distal4.9431211.60247HepG2AGGF1
chr222431391524313936-intron-Distal5.248098.80074K562AGGF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DDT is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DDT is not available on ENCORE database.

  • 74 RBPs can affect the levels of DDT.  








The Knockdown/knockout RNA-Seq assay for DDT is not available on ENCORE database.





74 RBPs can affect the gene expression of DDT :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DDTENSG00000099977.9516.20810664.22080-0.363703.308802.65380HepG2ACO1
DDTENSG00000099977.9724.05390486.571400.573303.488902.38320HepG2CCAR1
DDTENSG00000099977.9372.13230506.34630-0.444302.437701.70740HepG2CIRBP
DDTENSG00000099977.9487.01890663.96080-0.447103.176702.47400HepG2CKAP4
DDTENSG00000099977.9122.88750193.72340-0.656702.960301.84930HepG2CSTF2
DDTENSG00000099977.9544.98820332.204200.714106.012104.57570HepG2DDX5
DDTENSG00000099977.9877.47300530.165100.726806.070005.18460HepG2DDX6
DDTENSG00000099977.9313.84400232.300300.434002.738802.09040HepG2DNAJC2
DDTENSG00000099977.9692.50410509.490000.442702.670602.08860HepG2EIF2S1
DDTENSG00000099977.9488.15230303.698700.684602.880501.68740HepG2EIF2S2
DDTENSG00000099977.9430.97580562.96390-0.385401.893101.36040HepG2EIF4A3
DDTENSG00000099977.9251.94020548.28180-1.121808.802707.61200HepG2EIF4B
DDTENSG00000099977.9592.13460849.94290-0.521406.634905.77020HepG2ETF1
DDTENSG00000099977.9271.06160648.95980-1.2595018.4715016.45020HepG2EWSR1
DDTENSG00000099977.9305.84570188.096600.701204.567703.03310HepG2FAM120A
DDTENSG00000099977.9328.38480578.89860-0.817904.903903.87340HepG2FUBP3
DDTENSG00000099977.9382.45840559.66020-0.549203.637802.60940HepG2G3BP2
DDTENSG00000099977.9487.40450634.07060-0.379503.442802.36160HepG2HDGF
DDTENSG00000099977.9396.00090533.95190-0.431202.471801.80930HepG2HNRNPK
DDTENSG00000099977.9837.20820454.191200.8822018.4495016.85290HepG2HNRNPL
DDTENSG00000099977.9336.26260214.799200.646503.673301.80300HepG2CCAR2
DDTENSG00000099977.9853.92930568.456100.587004.569703.73250HepG2MAGOH
DDTENSG00000099977.91364.83020571.597101.2556018.3839016.87410HepG2MATR3
DDTENSG00000099977.9805.29490585.028400.460902.846502.20490HepG2NCBP2
DDTENSG00000099977.9301.01820520.85430-0.791004.745703.81240HepG2PABPC4
DDTENSG00000099977.9332.17760233.167700.510503.022702.25550HepG2PPIL4
DDTENSG00000099977.9201.19680310.25540-0.624804.303903.36300HepG2PRPF4
DDTENSG00000099977.9156.41890237.84540-0.604602.798701.98560HepG2PRPF8
DDTENSG00000099977.9681.76410506.281600.429203.831703.21080HepG2PTBP1
DDTENSG00000099977.9324.31750471.98690-0.541303.597302.92880HepG2PUF60
DDTENSG00000099977.9399.72480710.38560-0.8296011.3003010.40520HepG2RBM22
DDTENSG00000099977.9431.30790286.715500.589003.370202.26980HepG2RBM27
DDTENSG00000099977.9504.81900232.825901.116409.581007.64110HepG2RCC2
DDTENSG00000099977.9392.23140269.923500.539102.850201.75870HepG2RPS5
DDTENSG00000099977.9131.04400235.26640-0.844204.271803.31750HepG2RRP9
DDTENSG00000099977.9385.46700232.803500.727406.879205.93040HepG2SAFB2
DDTENSG00000099977.9606.74470452.586200.422804.148903.31400HepG2SLBP
DDTENSG00000099977.9293.44560802.33790-1.4511035.0260033.76980HepG2SRFBP1
DDTENSG00000099977.9252.22720550.17900-1.1252016.1658015.22460HepG2SRSF1
DDTENSG00000099977.9331.21790447.60210-0.434403.300302.70810HepG2SRSF9
DDTENSG00000099977.9310.40590494.52930-0.671906.151605.37140HepG2TAF15
DDTENSG00000099977.9167.97120253.98210-0.596503.231302.69770HepG2TIAL1
DDTENSG00000099977.9369.24740256.295900.526703.886803.24150HepG2TRIM56
DDTENSG00000099977.9507.15500379.511100.418201.902901.38670HepG2UTP3
DDTENSG00000099977.9721.50020433.480800.7349010.675909.65610K562AGGF1
DDTENSG00000099977.9523.30940365.621500.517204.776702.75330K562AKAP1
DDTENSG00000099977.9710.37490476.378800.576402.199601.33380K562AKAP8
DDTENSG00000099977.91019.76380451.068501.176707.733306.59170K562AKAP8L
DDTENSG00000099977.9356.22460667.89300-0.906808.543307.60400K562AQR
DDTENSG00000099977.9738.84910473.302200.642408.357206.63940K562ATP5C1
DDTENSG00000099977.9393.74810296.459300.409302.488001.58080K562BCLAF1
DDTENSG00000099977.9340.86390166.412601.034308.700806.54170K562CCAR1
DDTENSG00000099977.9560.69460433.638300.370602.775401.66940K562CPEB4
DDTENSG00000099977.9526.85270759.70260-0.528002.883601.88920K562CELF1
DDTENSG00000099977.9513.15050370.465400.469902.621001.60950K562DDX3X
DDTENSG00000099977.9522.90190375.602000.477203.929202.28860K562DDX6
DDTENSG00000099977.9313.34960225.512300.474502.397501.60860K562FIP1L1
DDTENSG00000099977.9256.17160402.50860-0.651905.252704.45670K562FXR1
DDTENSG00000099977.9106.88480201.11750-0.912002.378501.72990K562G3BP2
DDTENSG00000099977.9204.00530309.22350-0.600003.045801.74670K562HNRNPK
DDTENSG00000099977.9166.87540286.98710-0.782203.134201.60820K562ILF2
DDTENSG00000099977.9635.47790458.224000.471703.985102.62100K562MAK16
DDTENSG00000099977.9502.30260324.733900.629205.474804.11540K562MATR3
DDTENSG00000099977.9335.57830510.58830-0.605502.722601.91970K562MTPAP
DDTENSG00000099977.9250.21370386.48810-0.627304.451702.87980K562NCBP2
DDTENSG00000099977.9531.26490306.234100.794703.516802.36240K562PABPN1
DDTENSG00000099977.9181.65860306.97780-0.756903.771302.79980K562PCBP3
DDTENSG00000099977.9156.48730235.46010-0.589402.769401.96660K562POLR2G
DDTENSG00000099977.9491.53730256.019800.940903.269902.36460K562PPIG
DDTENSG00000099977.9481.90070316.153700.608005.149304.26680K562PTBP1
DDTENSG00000099977.9712.27320447.250000.671204.517403.84690K562PUS1
DDTENSG00000099977.9681.96200435.849100.645806.548505.66140K562RBM15
DDTENSG00000099977.9221.60140303.12170-0.451902.233501.48240K562RBM22
DDTENSG00000099977.9342.25520559.83890-0.709903.371902.47600K562SF3A3
DDTENSG00000099977.9137.08130309.94260-1.1770010.266708.91770K562SRSF1
DDTENSG00000099977.9222.16580125.562000.823103.968702.67460K562SRSF4
DDTENSG00000099977.9171.46500236.17580-0.461902.072801.36160K562SYNCRIP
DDTENSG00000099977.9419.42840313.668000.419102.227201.58780K562TARDBP
DDTENSG00000099977.9414.81910302.571900.455102.823701.99660K562TIA1
DDTENSG00000099977.9130.80360201.13090-0.620701.983301.30310K562U2AF2
DDTENSG00000099977.9377.69860601.43390-0.671202.754202.03630K562UPF1
DDTENSG00000099977.9304.17980535.22740-0.815204.017503.01140K562WDR43
DDTENSG00000099977.9603.79830791.35570-0.390302.944101.60820K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DDT is not available on ENCORE database.





1 RBPs can affect the splicing of DDT :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDDTENSG00000099977.9chr22-243159562431613224313566243138122431649524316648-0.084000.001500.06882excludedK562EFTUD2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DDT is not avaliable on ENCORE database.