DDRGK1

General Information

Gene Name       : DDRGK1
Gene ID             : ENSG00000198171.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DDRGK1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DDRGK1ENSG00000198171.126.0114.3210.16ENCSR000AEF
HepG2DDRGK1ENSG00000198171.12123.7453.3988.56ENCSR985KAT
K562DDRGK1ENSG00000198171.1222.7114.8718.79ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DDRGK1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DDRGK1 RNA is bound by 29 proteins.  







eCLIP assay for DDRGK1 is not avaliable on ENCORE database.





29 proteins are bound to DDRGK1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2031710733171182-3'-UTR,intron-Distal,intron-Proximal,polyA_site5.065998.87118HepG2UPF1
chr2031722203172311-3'-UTR,CDS,intron-Distal,intron-Proximal3.091953.59444K562PRPF8
chr2031712433171286-3'-UTR,intron-Distal3.7265515.03648HepG2RPS3
chr2031722093172299-3'-UTR,CDS,intron-Distal,intron-Proximal3.297838.18888K562AQR
chr2031721833172254-3'-UTR,CDS,intron-Distal,intron-Proximal3.852849.47365K562EFTUD2
chr2031710493171090-3'-UTR,intron-Distal,intron-Proximal4.111153.43975HepG2LIN28B
chr2031711223171222-3'-UTR,intron-Distal,intron-Proximal,polyA_site3.248843.70435HepG2LIN28B
chr2031712003171290-3'-UTR,intron-Distal4.5089032.19472HepG2LARP4
chr2031851843185316-5'-UTR,CDS,intron-Distal6.1354210.63869K562DDX3X
chr2031852303185322-5'-UTR,CDS,intron-Distal4.9331141.23368HepG2DDX3X
chr2031724243172464-CDS,intron-Distal3.657105.41876K562PUM1
chr2031839063183987-CDS,intron-Distal3.8350216.18100HepG2RPS3
chr2031723333172376-CDS,intron-Distal,intron-Proximal3.989226.65588K562AQR
chr2031718783171933-CDS,intron-Distal,intron-Proximal4.161088.02891K562EFTUD2
chr2031724153172436-CDS,intron-Distal4.584398.63502HepG2RPS3
chr2031839913184020-CDS,intron-Distal4.1635310.27034HepG2RPS3
chr2031758763175932-CDS,intron-Distal,intron-Proximal4.1672113.84840HepG2ZNF800
chr2031806483180672-CDS,intron-Distal4.8872313.28384K562UCHL5
chr2031758893175928-CDS,intron-Distal3.492747.10910K562UCHL5
chr2031838923183962-CDS,intron-Distal3.6735513.96409HepG2SND1
chr2031758763175926-CDS,intron-Distal,intron-Proximal3.4255510.95121HepG2G3BP1
chr2031723383172378-CDS,intron-Distal,intron-Proximal4.325648.73115K562BUD13
chr2031758673175879-CDS,intron-Distal,intron-Proximal3.8355420.80571HepG2PRPF8
chr2031758783175925-CDS,intron-Distal4.3938415.60472K562ZNF622
chr2031840493184062-CDS,intron-Distal3.190597.71584HepG2GRWD1
chr2031759533175987-CDS,intron-Distal,intron-Proximal6.0872615.84699K562UCHL5
chr2031806463180682-CDS,intron-Distal,intron-Proximal4.296826.25801HepG2G3BP1
chr2031759573175995-CDS,intron-Distal,intron-Proximal3.282435.51246HepG2FTO
chr2031754923175511-CDS,intron-Distal4.374738.55053HepG2ZNF800
chr2031759873175998-CDS,intron-Distal,intron-Proximal5.8958314.06837K562UCHL5
chr2031724193172462-CDS,intron-Distal3.6659221.34757HepG2EFTUD2
chr2031724023172462-CDS,intron-Distal,intron-Proximal3.201576.21257K562GRWD1
chr2031724053172467-CDS,intron-Distal,intron-Proximal3.5740411.67572K562ZNF622
chr2031838593183870-CDS,intron-Distal3.769108.81096HepG2PPIG
chr2031759323175997-CDS,intron-Distal,intron-Proximal3.146899.76331HepG2ZNF800
chr2031754983175513-CDS,intron-Distal4.2053811.72700K562ZNF622
chr2031851823185213-CDS,intron-Distal3.7966410.88170HepG2RPS3
chr2031851823185184-CDS,intron-Distal3.052983.85159HepG2UCHL5
chr2031754763175492-CDS,intron-Distal3.472834.83522HepG2ZNF800
chr2031722633172310-CDS,intron-Distal,intron-Proximal4.282503.51664K562RBM15
chr2031723593172453-CDS,intron-Distal,intron-Proximal3.0422626.14190HepG2PRPF8
chr2031840473184062-CDS,intron-Distal3.603138.51932K562ZNF622
chr2031758763175926-CDS,intron-Distal,intron-Proximal3.953507.34123K562DDX24
chr2031810723181124-CDS,intron-Distal,intron-Proximal4.1640615.10361HepG2AQR
chr2031723393172388-CDS,intron-Distal,intron-Proximal3.3772813.33209HepG2RBM22
chr2031723883172411-CDS,intron-Distal,intron-Proximal3.379775.14608K562AQR
chr2031758763175971-CDS,intron-Distal,intron-Proximal3.2689111.35533K562PUM1
chr2031718553171934-CDS,intron-Distal,intron-Proximal3.633618.68164HepG2AQR
chr2031810873181100-CDS,intron-Distal3.7062110.64832HepG2PPIG
chr2031754213175492-CDS,intron-Distal,intron-Proximal4.2463613.83580HepG2PRPF8
chr2031758813175929-CDS,intron-Distal3.494065.00233HepG2FTO
chr2031718423171873-CDS,intron-Distal3.054106.91034HepG2BCLAF1
chr2031724073172464-CDS,intron-Distal,intron-Proximal3.8286212.91772HepG2GRWD1
chr2031758773175921-CDS,intron-Distal3.282478.84415HepG2BCLAF1
chr2031724213172451-CDS,intron-Distal3.522307.15230K562UCHL5
chr2031809933181041-CDS,intron-Distal3.087908.54347HepG2GRWD1
chr2031755073175514-CDS,intron-Distal3.544436.02988K562UCHL5
chr2031840473184062-CDS,intron-Distal4.090005.02275HepG2UCHL5
chr2031723813172419-CDS,intron-Distal,intron-Proximal3.8805927.38241HepG2EFTUD2
chr2031852273185248-CDS,intron-Distal3.639049.67886HepG2GRWD1
chr2031758763176000-CDS,intron-Distal,intron-Proximal3.0623413.08033K562ZNF800
chr2031723853172463-CDS,intron-Distal,intron-Proximal3.643979.39825HepG2ZNF800
chr2031851823185225-CDS,intron-Distal3.1838311.17408K562ZNF622
chr2031723343172471-CDS,intron-Distal,intron-Proximal3.2805214.30068K562EFTUD2
chr2031759353175999-CDS,intron-Distal,intron-Proximal3.266957.80802HepG2G3BP1
chr2031758753175929-CDS,intron-Distal,intron-Proximal3.513266.53022HepG2FXR2
chr2031838573183871-CDS,intron-Distal,intron-Proximal5.031734.75872K562DDX24
chr2031754793175507-CDS,intron-Distal3.904628.64848K562UCHL5
chr2031724053172464-CDS,intron-Distal,intron-Proximal3.637159.87923K562DDX24
chr2031758783175928-CDS,intron-Distal4.297994.83089HepG2UCHL5
chr2031809923181047-CDS,intron-Distal3.197404.60423HepG2G3BP1
chr2031723763172388-CDS,intron-Distal,intron-Proximal4.692087.79506K562AQR
chr2031810003181008-CDS,intron-Distal3.269444.07060HepG2ZNF800
chr2031759463175990-CDS,intron-Distal,intron-Proximal3.055736.39536K562GRWD1
chr2031758763175939-CDS,intron-Distal,intron-Proximal4.3942114.80913HepG2GRWD1
chr2031758753175889-CDS,intron-Distal,intron-Proximal3.950309.18311K562UCHL5
chr2031754763175498-CDS,intron-Distal4.0365010.31073K562ZNF622
chr2031723363172381-CDS,intron-Distal,intron-Proximal3.7091523.83180HepG2EFTUD2
chr2031722543172316-CDS,intron-Distal,intron-Proximal4.158319.14335K562EFTUD2
chr2031851823185227-CDS,intron-Distal3.7020915.94363HepG2GRWD1
chr2031806463180684-CDS,intron-Distal,intron-Proximal3.173286.58925K562GRWD1
chr2031753803175421-intron-Distal,intron-Proximal3.846358.08346HepG2PRPF8
chr2031719003171942-intron-Distal,intron-Proximal4.229327.40409K562BUD13
chr2031837463183811-intron-Distal,intron-Proximal3.823594.00320K562AQR
chr2031758403175859-intron-Distal,intron-Proximal4.7674612.14514HepG2AQR
chr2031753223175404-intron-Distal,intron-Proximal5.4791920.92011HepG2EFTUD2
chr2031733153173389-intron-Distal3.570256.99200HepG2EFTUD2
chr2031725803172654-intron-Distal4.606095.97091K562TARDBP
chr2031725773172669-intron-Distal3.937693.09815K562IGF2BP1
chr2031758463175873-intron-Distal,intron-Proximal5.2006610.47516HepG2EFTUD2
chr2031848373184963-intron-Distal4.055053.17235HepG2HNRNPK
chr2031725813172670-intron-Distal4.148256.26655K562EIF4G2
chr2031798063179917-intron-Distal6.1784519.36501HepG2QKI
chr2031758293175867-intron-Distal,intron-Proximal4.4216025.24781HepG2PRPF8
chr2031747873174845-intron-Distal4.0086413.05648HepG2EFTUD2
chr2031719033171941-intron-Distal,intron-Proximal3.127767.07936K562UCHL5
chr2031753703175420-intron-Distal,intron-Proximal4.7819814.40017HepG2RBM22
chr2031807563180817-intron-Distal,intron-Proximal3.604846.96502HepG2SF3B4
chr2031840983184155-intron-Distal,intron-Proximal4.259784.77050HepG2SF3B4
chr2031797593179806-intron-Distal4.218803.50357HepG2QKI
chr2031754323175473-intron-Distal,intron-Proximal3.618603.79442K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DDRGK1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DDRGK1 is not available on ENCORE database.

  • 81 RBPs can affect the levels of DDRGK1.  








The Knockdown/knockout RNA-Seq assay for DDRGK1 is not available on ENCORE database.





81 RBPs can affect the gene expression of DDRGK1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DDRGK1ENSG00000198171.8849.864801084.88810-0.352202.474901.45800HepG2AATF
DDRGK1ENSG00000198171.81182.52140925.668800.353202.504901.55480HepG2ADAR
DDRGK1ENSG00000198171.82466.232601976.013100.319604.794703.80870HepG2AKAP8L
DDRGK1ENSG00000198171.81612.977802130.02020-0.401103.278802.42340HepG2ASCC1
DDRGK1ENSG00000198171.82751.816802273.692300.275203.571202.80790HepG2AUH
DDRGK1ENSG00000198171.83017.182802361.530700.353403.358802.70640HepG2BOP1
DDRGK1ENSG00000198171.82574.548202023.701900.347202.735401.96700HepG2CIRBP
DDRGK1ENSG00000198171.82781.874602167.968100.359603.236102.49880HepG2CPSF6
DDRGK1ENSG00000198171.82999.176802419.649300.309703.218002.02480HepG2CPSF7
DDRGK1ENSG00000198171.81245.56890949.274900.391802.743101.72960HepG2YBX3
DDRGK1ENSG00000198171.82312.077201686.211800.455308.703307.68400HepG2CELF1
DDRGK1ENSG00000198171.81550.293501819.00140-0.230602.886802.03640HepG2DDX19B
DDRGK1ENSG00000198171.81182.10400950.573800.314402.905601.71980HepG2DDX1
DDRGK1ENSG00000198171.82661.224402021.766100.396403.713402.54960HepG2DDX5
DDRGK1ENSG00000198171.83159.334402118.804700.576305.394604.55810HepG2DDX6
DDRGK1ENSG00000198171.81270.95240932.080600.447305.858304.86830HepG2DNAJC21
DDRGK1ENSG00000198171.81160.51310923.902700.328904.312603.53150HepG2DNAJC2
DDRGK1ENSG00000198171.82325.668702966.51280-0.351102.315601.60760HepG2FIP1L1
DDRGK1ENSG00000198171.8842.380501080.30820-0.358902.305001.49460HepG2GEMIN5
DDRGK1ENSG00000198171.82352.157901937.144000.280004.167103.30580HepG2HNRNPF
DDRGK1ENSG00000198171.82837.124702133.831500.410904.038103.20770HepG2HNRNPK
DDRGK1ENSG00000198171.82019.714901651.163500.290604.674803.81610HepG2HNRNPL
DDRGK1ENSG00000198171.81570.065501039.796400.5944012.3215011.11810HepG2HNRNPU
DDRGK1ENSG00000198171.81426.135201062.114700.425107.809306.64360HepG2ILF2
DDRGK1ENSG00000198171.82082.166201797.885000.211702.817101.79300HepG2KIF1C
DDRGK1ENSG00000198171.81736.161102239.37850-0.367205.958605.12080HepG2PCBP1
DDRGK1ENSG00000198171.81565.41110927.412300.7552016.0224014.34040HepG2PPIL4
DDRGK1ENSG00000198171.81015.609101329.83840-0.388904.884003.88750HepG2PRPF4
DDRGK1ENSG00000198171.81601.403902278.70390-0.5089010.690609.74980HepG2PTBP1
DDRGK1ENSG00000198171.82264.329601821.719700.313705.554704.77530HepG2PUM1
DDRGK1ENSG00000198171.81659.325002003.32750-0.271803.816603.11650HepG2PUS1
DDRGK1ENSG00000198171.81592.918302467.78070-0.631506.465905.56720HepG2QKI
DDRGK1ENSG00000198171.82619.160302181.949400.263402.938802.40920HepG2RBM22
DDRGK1ENSG00000198171.81691.401802535.93500-0.5843013.6267012.59490HepG2NELFE
DDRGK1ENSG00000198171.81752.681802361.95790-0.430407.932506.96780HepG2RECQL
DDRGK1ENSG00000198171.82716.255402086.524200.380404.177103.36530HepG2RPLP0
DDRGK1ENSG00000198171.82072.35520925.974401.1621051.4874049.26150HepG2SAFB2
DDRGK1ENSG00000198171.81771.233602372.33070-0.421607.571406.67190HepG2SF3B4
DDRGK1ENSG00000198171.81932.258101645.606100.231602.663501.97220HepG2SLBP
DDRGK1ENSG00000198171.81605.143501079.825300.5718013.9292012.65740HepG2SMN1
DDRGK1ENSG00000198171.82195.880502464.40100-0.166401.995701.54920HepG2SRFBP1
DDRGK1ENSG00000198171.81389.748102476.23810-0.8333028.0402026.88090HepG2SRSF1
DDRGK1ENSG00000198171.82012.481301694.432700.248102.986902.33830HepG2SRSF5
DDRGK1ENSG00000198171.81451.273702014.58470-0.473209.487708.57240HepG2SRSF9
DDRGK1ENSG00000198171.82515.376802139.630200.233302.958402.43170HepG2SSB
DDRGK1ENSG00000198171.82265.183301421.735000.671902.369101.36290HepG2STIP1
DDRGK1ENSG00000198171.82363.641101926.920500.294604.918504.13020HepG2SUCLG1
DDRGK1ENSG00000198171.81359.152802225.84590-0.7116015.9358014.75450HepG2TAF15
DDRGK1ENSG00000198171.81115.55760810.102100.461503.177802.11370HepG2TFIP11
DDRGK1ENSG00000198171.81592.065702045.13610-0.361303.934402.94560HepG2TIA1
DDRGK1ENSG00000198171.81469.197901019.392600.527209.553708.60240HepG2TRIM56
DDRGK1ENSG00000198171.82179.947501676.641300.378604.540903.39010HepG2TUFM
DDRGK1ENSG00000198171.83394.006402537.826000.419304.481403.69130HepG2U2AF1
DDRGK1ENSG00000198171.8912.11580713.965500.353302.051801.39860HepG2UCHL5
DDRGK1ENSG00000198171.83372.678402641.864500.352207.247306.20610HepG2UPF1
DDRGK1ENSG00000198171.83708.237902550.608200.5398015.8228014.56400HepG2UTP3
DDRGK1ENSG00000198171.84085.669702905.537700.4917017.5262016.44420HepG2ZNF622
DDRGK1ENSG00000198171.82102.157901413.561200.572405.134804.40140K562AGGF1
DDRGK1ENSG00000198171.82001.499301553.507100.365502.194901.33050K562AKAP8
DDRGK1ENSG00000198171.82244.638901470.927900.609705.825704.85590K562AKAP8L
DDRGK1ENSG00000198171.82150.509501543.458300.478403.596302.54310K562ATP5C1
DDRGK1ENSG00000198171.8452.66800346.278600.386402.337301.38070K562CSTF2
DDRGK1ENSG00000198171.81074.14070790.028100.443105.670903.89520K562DDX21
DDRGK1ENSG00000198171.8736.68050404.182100.865906.775104.77470K562EEF2
DDRGK1ENSG00000198171.8473.12300666.25050-0.493804.741803.97880K562FXR1
DDRGK1ENSG00000198171.8612.91340448.672700.449903.345501.73820K562G3BP1
DDRGK1ENSG00000198171.8139.54210327.11240-1.229106.157205.01200K562G3BP2
DDRGK1ENSG00000198171.8669.04300503.657800.409602.272701.43340K562HNRNPM
DDRGK1ENSG00000198171.81008.81870767.592800.394203.993902.91280K562HNRNPU
DDRGK1ENSG00000198171.8722.26580469.449000.621504.412302.98990K562IGF2BP2
DDRGK1ENSG00000198171.82189.186201560.835000.488003.822402.83020K562KIF1C
DDRGK1ENSG00000198171.8703.65690951.68400-0.435605.274004.18320K562MTPAP
DDRGK1ENSG00000198171.81655.460001225.627300.433602.632801.77570K562NAA15
DDRGK1ENSG00000198171.8396.63780717.05640-0.854308.242806.80910K562PCBP3
DDRGK1ENSG00000198171.8279.55830550.01250-0.9763011.6056010.02350K562POLR2G
DDRGK1ENSG00000198171.81018.014301397.22170-0.456804.683803.26370K562PUM1
DDRGK1ENSG00000198171.81018.970401368.60130-0.425604.362503.15120K562PUM2
DDRGK1ENSG00000198171.82207.992701458.375200.598305.515704.78070K562PUS1
DDRGK1ENSG00000198171.81971.983501421.283200.472403.492002.83830K562RBM15
DDRGK1ENSG00000198171.8458.93430309.968600.566102.989201.59940K562RBM25
DDRGK1ENSG00000198171.8342.80940483.45700-0.496003.167601.98890K562NELFE
DDRGK1ENSG00000198171.8496.42610677.52600-0.448702.644301.66740K562RPS3
DDRGK1ENSG00000198171.8875.463801043.40450-0.253202.047701.33870K562SF3A3
DDRGK1ENSG00000198171.8455.47090339.856300.422302.716101.86930K562SF3B4
DDRGK1ENSG00000198171.8798.522601068.99420-0.420805.637104.36230K562SRPK2
DDRGK1ENSG00000198171.8673.89670443.722900.602805.299403.75910K562SRSF5
DDRGK1ENSG00000198171.8519.71360367.625100.499402.600201.61770K562SUPV3L1
DDRGK1ENSG00000198171.8654.76080475.410100.461703.194102.43440K562TARDBP
DDRGK1ENSG00000198171.8680.30240458.597600.568803.217702.32560K562TIA1
DDRGK1ENSG00000198171.8687.49770450.119000.610902.893401.77070K562TRA2A
DDRGK1ENSG00000198171.8948.011601121.16260-0.242002.082901.45300K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DDRGK1 is not available on ENCORE database.





1 RBPs can affect the splicing of DDRGK1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXEDDRGK1ENSG00000198171.8chr20-31724103172467317547531755143171835317188431758763175999-0.158000.000000.000002includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DDRGK1 is not avaliable on ENCORE database.