CTSS

General Information

Gene Name       : CTSS
Gene ID             : ENSG00000163131.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CTSS)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CTSSENSG00000163131.1049.0239.3044.16ENCSR000AEF
HepG2CTSSENSG00000163131.100.780.740.76ENCSR985KAT
K562CTSSENSG00000163131.108.076.087.08ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CTSS is not avaliable on ENCORE database.



Proteins bound to RNA
  • CTSS RNA is bound by 1 proteins.  







eCLIP assay for CTSS is not avaliable on ENCORE database.





1 proteins are bound to CTSS RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1150724424150724484-CDS,intron-Distal4.821233.02572K562SND1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CTSS is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CTSS is not available on ENCORE database.

  • 97 RBPs can affect the levels of CTSS.  








The Knockdown/knockout RNA-Seq assay for CTSS is not available on ENCORE database.





97 RBPs can affect the gene expression of CTSS :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CTSSENSG00000163131.6118.4324027.345302.1146012.0692010.61730HepG2AKAP8L
CTSSENSG00000163131.665.5110018.916501.792004.909003.91850HepG2CALR
CTSSENSG00000163131.694.5299037.780301.323004.047502.85560HepG2CCAR1
CTSSENSG00000163131.6103.4092044.056501.230804.151903.21600HepG2CIRBP
CTSSENSG00000163131.688.3863010.957703.0118012.5907011.24340HepG2CPSF6
CTSSENSG00000163131.654.2816020.987201.370902.955401.53660HepG2CSTF2T
CTSSENSG00000163131.6118.4555022.519302.3950012.3757011.06190HepG2DDX21
CTSSENSG00000163131.6145.6953053.683401.440306.574105.65190HepG2DDX3X
CTSSENSG00000163131.647.5563021.182701.166701.987001.32040HepG2DDX55
CTSSENSG00000163131.634.1520012.487801.451302.601501.96590HepG2DNAJC2
CTSSENSG00000163131.6124.7620019.517302.6763013.2746011.45540HepG2EIF3D
CTSSENSG00000163131.6124.7157047.704401.386404.826003.93240HepG2EIF4B
CTSSENSG00000163131.685.1720034.264001.313604.336203.33160HepG2EIF4G1
CTSSENSG00000163131.676.3900026.597001.522004.915303.80600HepG2EWSR1
CTSSENSG00000163131.671.7429031.382301.192803.063501.88900HepG2FUS
CTSSENSG00000163131.698.7868012.421002.9914012.6988011.42230HepG2GPKOW
CTSSENSG00000163131.6139.8794030.080602.2172010.637307.88180HepG2HLTF
CTSSENSG00000163131.6278.3384012.724704.4510024.8469023.25680HepG2HNRNPA1
CTSSENSG00000163131.663.5722031.921000.993802.319501.45550HepG2HNRNPA2B1
CTSSENSG00000163131.650.2748014.152201.828703.708602.91590HepG2HNRNPC
CTSSENSG00000163131.632.6900011.853601.463401.988301.44610HepG2HNRNPLL
CTSSENSG00000163131.6146.9337046.607901.656408.516907.40150HepG2IGF2BP2
CTSSENSG00000163131.6145.8119043.750501.736605.314203.97540HepG2IGF2BP3
CTSSENSG00000163131.653.6319024.878901.108102.565701.58280HepG2KIF1C
CTSSENSG00000163131.6127.2931049.731601.355805.137304.30190HepG2MATR3
CTSSENSG00000163131.6127.2309050.901101.321605.200404.34440HepG2NCBP2
CTSSENSG00000163131.688.6092019.437102.188504.654103.21560HepG2NONO
CTSSENSG00000163131.6101.9225045.321901.169103.971203.11660HepG2PABPC4
CTSSENSG00000163131.692.9376042.919801.114503.876003.18350HepG2PCBP1
CTSSENSG00000163131.631.9891012.539601.351002.138901.48360HepG2PPIL4
CTSSENSG00000163131.6234.5724016.355803.8421030.4450028.23020HepG2PRPF8
CTSSENSG00000163131.675.1683043.672700.783302.044201.56150HepG2PTBP1
CTSSENSG00000163131.693.6163034.899801.423405.764304.97300HepG2PUM1
CTSSENSG00000163131.6200.8503034.875902.5257019.2639017.59240HepG2PUM2
CTSSENSG00000163131.690.2761027.716301.703507.100606.19130HepG2PUS1
CTSSENSG00000163131.664.3767023.052401.481504.050703.03640HepG2RBM15
CTSSENSG00000163131.675.3346037.042601.024002.464201.96770HepG2RBM22
CTSSENSG00000163131.689.7257029.967801.582004.399003.05990HepG2RCC2
CTSSENSG00000163131.683.6863031.190701.423804.068602.19500HepG2RTF1
CTSSENSG00000163131.641.8172017.883301.225402.278401.66570HepG2SF3A3
CTSSENSG00000163131.6188.4255041.836102.1711017.5792016.60330HepG2SRFBP1
CTSSENSG00000163131.667.6148036.918600.872902.058401.50680HepG2SUCLG1
CTSSENSG00000163131.665.4178028.936201.176702.637001.34420HepG2SUGP2
CTSSENSG00000163131.688.6209021.091402.070906.583505.60870HepG2SUPV3L1
CTSSENSG00000163131.644.5837011.554601.948003.943603.09660HepG2TARDBP
CTSSENSG00000163131.673.9112013.666802.435009.069008.25580HepG2TIAL1
CTSSENSG00000163131.669.3898028.786701.269202.927801.42130HepG2TRA2A
CTSSENSG00000163131.689.6516015.860002.4988011.8212010.55970HepG2UPF1
CTSSENSG00000163131.644.8543016.300101.460303.025601.93430HepG2UTP18
CTSSENSG00000163131.668.6228035.609900.946302.322901.32570HepG2XPO5
CTSSENSG00000163131.660.87420143.60340-1.238205.691003.92900K562AARS
CTSSENSG00000163131.6214.41910126.824500.757503.645002.21870K562ABCF1
CTSSENSG00000163131.6274.48450161.206900.767705.434604.10260K562ATP5C1
CTSSENSG00000163131.6312.34470107.143901.543508.387606.82400K562BOP1
CTSSENSG00000163131.6174.8677088.357000.984704.605702.71130K562BUD13
CTSSENSG00000163131.6416.04790138.653801.5852012.2726010.05760K562CNOT7
CTSSENSG00000163131.6276.59690113.922801.2796010.599309.05060K562CPSF6
CTSSENSG00000163131.671.67170207.44470-1.5333012.3908011.11880K562DDX47
CTSSENSG00000163131.694.7210049.736200.929302.789401.43850K562DNAJC21
CTSSENSG00000163131.653.80810160.31700-1.575008.314306.16400K562EEF2
CTSSENSG00000163131.6258.97130154.877400.741603.820302.73540K562EFTUD2
CTSSENSG00000163131.6404.75680134.142201.5932013.0558011.67240K562EIF2S2
CTSSENSG00000163131.673.05950218.92850-1.5833012.8870011.13410K562EIF3G
CTSSENSG00000163131.6116.82630188.75000-0.692103.126501.88030K562EIF4B
CTSSENSG00000163131.6145.2644049.373401.556809.167306.87640K562EXOSC5
CTSSENSG00000163131.6234.16850137.902900.763803.541201.56160K562FAM120A
CTSSENSG00000163131.6410.68910115.917401.824807.384305.95160K562FMR1
CTSSENSG00000163131.6301.3999098.252101.617005.371004.05200K562FTO
CTSSENSG00000163131.668.43380217.95440-1.6712010.794609.68480K562FXR1
CTSSENSG00000163131.6222.20360108.766701.030506.063204.88810K562GPKOW
CTSSENSG00000163131.6117.23700201.40420-0.780704.144102.83170K562HNRNPA1
CTSSENSG00000163131.6284.02240129.789401.129705.938003.66050K562HNRNPAB
CTSSENSG00000163131.696.76760157.12060-0.699302.531201.95690K562HNRNPC
CTSSENSG00000163131.6277.03250187.466400.563302.748001.69840K562HNRNPL
CTSSENSG00000163131.6114.97030223.02540-0.955906.441705.06900K562HNRNPU
CTSSENSG00000163131.6200.83100123.617000.700003.093002.25410K562HSPD1
CTSSENSG00000163131.6141.76210254.45050-0.843904.356702.95020K562IGF2BP2
CTSSENSG00000163131.6113.3586046.701001.279304.278802.42750K562KHDRBS1
CTSSENSG00000163131.6176.7313092.877200.928103.512902.44650K562KRR1
CTSSENSG00000163131.6249.18930120.996501.042204.005201.47740K562LARP4
CTSSENSG00000163131.666.16320159.36570-1.268206.190003.87600K562LIN28B
CTSSENSG00000163131.6109.21070267.37380-1.2917011.773409.95330K562MAGOH
CTSSENSG00000163131.6109.01070266.82470-1.2914011.759409.73320K562MATR3
CTSSENSG00000163131.6256.85930182.655000.491802.349901.52250K562MBNL1
CTSSENSG00000163131.6208.12940106.169100.971005.198403.97490K562METAP2
CTSSENSG00000163131.6266.96850128.200801.058204.852802.00670K562NFX1
CTSSENSG00000163131.6255.34610152.688700.741803.667802.13540K562NONO
CTSSENSG00000163131.6233.99180146.875900.671803.921403.05190K562NSUN2
CTSSENSG00000163131.6338.73130133.206501.346408.581106.41770K562PABPC1
CTSSENSG00000163131.6137.38880261.37770-0.927906.728704.56720K562PCBP1
CTSSENSG00000163131.668.40420140.87630-1.042303.568302.52270K562PSIP1
CTSSENSG00000163131.6178.79690259.77360-0.538902.892102.21590K562PTBP1
CTSSENSG00000163131.6635.25020345.303300.879407.962806.07250K562PUM1
CTSSENSG00000163131.6687.92480338.265601.0240014.5869012.40700K562PUM2
CTSSENSG00000163131.6247.06410152.363000.697303.568302.96320K562PUS1
CTSSENSG00000163131.663.30100128.53750-1.021903.965502.77600K562RCC2
CTSSENSG00000163131.6153.87010262.10980-0.768504.635603.18050K562NELFE
CTSSENSG00000163131.6143.07180215.63140-0.591802.968301.31330K562RPS10
CTSSENSG00000163131.652.24340153.49460-1.554907.664706.29080K562RPS19
CTSSENSG00000163131.651.25700120.97380-1.238904.158102.90360K562RPS3
CTSSENSG00000163131.636.90500128.94680-1.804908.263705.79640K562SERBP1
CTSSENSG00000163131.6212.54290144.938700.552202.668801.86740K562SF3A3
CTSSENSG00000163131.675.28360253.12780-1.7495017.8498015.51560K562SF3B4
CTSSENSG00000163131.6117.70410224.28490-0.930205.713603.19530K562SLTM
CTSSENSG00000163131.675.50870148.49370-0.975704.588403.41760K562SRPK2
CTSSENSG00000163131.6236.38890123.629700.935003.353901.54430K562STIP1
CTSSENSG00000163131.6159.81470257.73170-0.689503.706802.88300K562TARDBP
CTSSENSG00000163131.6165.56910248.61420-0.586502.911902.07000K562TIA1
CTSSENSG00000163131.679.54730135.49870-0.768402.498701.61420K562TIAL1
CTSSENSG00000163131.6138.73900243.98940-0.814404.617103.14120K562TRA2A
CTSSENSG00000163131.6820.96070366.008001.1653018.1895015.25480K562UBE2L3
CTSSENSG00000163131.6523.58250155.736201.7492033.4946031.31730K562UPF1
CTSSENSG00000163131.6161.4135091.845500.813403.101601.82280K562UTP3
CTSSENSG00000163131.6203.36860133.257700.609802.814401.92990K562WDR3
CTSSENSG00000163131.644.17710138.57830-1.6493010.264108.75200K562WDR43
CTSSENSG00000163131.6213.1998099.409501.100704.298102.09050K562XPO5
CTSSENSG00000163131.6391.96360209.417500.904207.180005.67640K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CTSS is not available on ENCORE database.






No RBPs affect the alternative splcing events of CTSS on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CTSS is not avaliable on ENCORE database.