CPPED1

General Information

Gene Name       : CPPED1
Gene ID             : ENSG00000103381.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CPPED1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CPPED1ENSG00000103381.1115.6415.9215.78ENCSR000AEF
HepG2CPPED1ENSG00000103381.1172.8599.9986.42ENCSR985KAT
K562CPPED1ENSG00000103381.1113.7115.1214.41ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CPPED1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CPPED1 RNA is bound by 16 proteins.  







eCLIP assay for CPPED1 is not avaliable on ENCORE database.





16 proteins are bound to CPPED1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr161275804212758123-3'-UTR,intron-Distal3.795124.23488K562FAM120A
chr161275791112758042-3'-UTR,intron-Distal3.812454.91593K562FAM120A
chr161275794012757986-3'-UTR,intron-Distal4.171203.95192HepG2UPF1
chr161275878512758948-3'-UTR,CDS,intron-Distal3.117216.09877HepG2G3BP1
chr161275766812757706-3'-UTR,intron-Distal4.016163.20319K562UPF1
chr161275842412758461-3'-UTR,intron-Distal4.248573.56427K562FAM120A
chr161275798612758068-3'-UTR,intron-Distal4.880016.96152HepG2UPF1
chr161289757512897707-5'-UTR,CDS,intron-Distal,intron-Proximal4.459815.43397K562NOLC1
chr161289757312897707-5'-UTR,CDS,intron-Distal,intron-Proximal3.390804.47117K562DDX3X
chr161289760012897696-5'-UTR,CDS,intron-Distal5.3227314.17008HepG2SUB1
chr161279877212798842-CDS,intron-Distal3.817315.69815HepG2G3BP1
chr161287517412875227-CDS,intron-Distal3.134623.69775K562YBX3
chr161287508812875220-CDS,intron-Distal3.545159.28648HepG2G3BP1
chr161279869512798744-CDS,intron-Distal3.585294.30677K562YBX3
chr161278291612782995-intron-Distal4.443934.68586HepG2HNRNPL
chr161284412312844170-intron-Distal3.955776.77804HepG2QKI
chr161280378812803868-intron-Distal3.318157.79779HepG2PTBP1
chr161282627712826350-intron-Distal3.266305.20425HepG2MATR3
chr161280380612803864-intron-Distal4.861476.17200HepG2PCBP2
chr161284017012840234-intron-Distal3.732396.18300HepG2HNRNPC
chr161278208812782138-intron-Distal3.292293.10946HepG2SFPQ
chr161280371012803788-intron-Distal6.1473515.77934HepG2PTBP1
chr161281085112810952-intron-Distal3.234283.37567HepG2HNRNPK
chr161276159412761661-intron-Distal4.761574.40618K562PTBP1
chr161283462312834645-intron-Distal4.188583.41738HepG2PTBP1
chr161278281212782916-intron-Distal3.436575.82614HepG2HNRNPL
chr161280369812803806-intron-Distal5.1804831.03284HepG2PCBP2
chr161283374312833782-intron-Distal3.214823.34990HepG2PTBP1
chr161284086212840915-intron-Distal4.422684.12150K562LSM11
chr161283902112839100-intron-Distal3.763215.28137HepG2MATR3
chr161286465012864729-intron-Distal5.527107.91717K562PTBP1
chr161276519812765297-intron-Distal3.647886.41195HepG2PTBP1
chr161275920912759283-intron-Distal3.299783.30286HepG2PTBP1
chr161287465012874715-intron-Distal3.584294.51074HepG2HNRNPL
chr161283383712833919-intron-Distal4.245157.08067K562PTBP1
chr161287104112871139-intron-Distal3.751216.22064HepG2QKI
chr161284654012846603-intron-Distal4.171694.04710HepG2HNRNPC
chr161283392512833966-intron-Distal3.507304.48652HepG2PTBP1
chr161282310212823153-intron-Distal4.663293.50357HepG2QKI
chr161283383712833898-intron-Distal5.8950129.61853HepG2PTBP1
chr161286465712864738-intron-Distal3.830479.15475HepG2PCBP2
chr161283389812833925-intron-Distal6.0288015.53570HepG2PTBP1
chr161276069312760761-intron-Distal4.645024.51735HepG2QKI
chr161284419312844299-intron-Distal6.2244837.00288HepG2QKI
chr161284419612844299-intron-Distal5.091664.99795K562QKI
chr161276160312761706-intron-Distal4.466077.88692HepG2PTBP1
chr161283776412837820-intron-Distal3.093625.77876HepG2HNRNPC
chr161286465212864741-intron-Distal5.7081441.92024HepG2PTBP1
chr161283879512838846-intron-Distal3.074505.39438HepG2HNRNPC
chr161284409812844123-intron-Distal4.502325.05488HepG2QKI
chr161287464712874707-intron-Distal3.130663.00914HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CPPED1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CPPED1 is not available on ENCORE database.

  • 95 RBPs can affect the levels of CPPED1.  








The Knockdown/knockout RNA-Seq assay for CPPED1 is not available on ENCORE database.





95 RBPs can affect the gene expression of CPPED1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CPPED1ENSG00000103381.74748.029203592.569300.402203.727502.64140HepG2ABCF1
CPPED1ENSG00000103381.73386.684502814.681300.266804.536103.79430HepG2ACO1
CPPED1ENSG00000103381.73633.446004901.22010-0.431803.468802.88190HepG2AKAP1
CPPED1ENSG00000103381.73398.336402827.582600.265203.871902.97730HepG2AKAP8L
CPPED1ENSG00000103381.75586.527403852.825900.535906.517605.36540HepG2CIRBP
CPPED1ENSG00000103381.73381.324302813.681300.265004.397503.59660HepG2CKAP4
CPPED1ENSG00000103381.71908.783703028.15180-0.6658017.5090016.16920HepG2CELF1
CPPED1ENSG00000103381.71845.240902204.33900-0.256502.819501.64960HepG2DDX1
CPPED1ENSG00000103381.72931.405302222.906000.399004.272703.44740HepG2DDX21
CPPED1ENSG00000103381.73634.631504694.88170-0.369303.057302.40490HepG2DDX3X
CPPED1ENSG00000103381.71721.810002362.72800-0.456503.795202.90500HepG2DDX55
CPPED1ENSG00000103381.73731.628603047.613100.292002.337701.40880HepG2DDX5
CPPED1ENSG00000103381.73236.624604033.27470-0.317502.050601.51200HepG2DDX6
CPPED1ENSG00000103381.73886.681102692.786900.5293014.0071012.72520HepG2DKC1
CPPED1ENSG00000103381.72713.226702161.508600.327904.553303.66890HepG2DNAJC21
CPPED1ENSG00000103381.71358.702102142.28630-0.6569020.9106019.27340HepG2DNAJC2
CPPED1ENSG00000103381.73413.859002417.420900.497805.602704.32800HepG2EEF2
CPPED1ENSG00000103381.71322.406102047.04210-0.630405.446203.89950HepG2AGO1
CPPED1ENSG00000103381.72209.503703877.01270-0.8112012.2076011.01820HepG2EIF2S1
CPPED1ENSG00000103381.74258.018203212.254000.406508.694707.36490HepG2EIF4G1
CPPED1ENSG00000103381.71398.360601753.84930-0.326803.280301.99300HepG2FAM120A
CPPED1ENSG00000103381.73010.454104323.20170-0.522105.777604.80130HepG2FXR1
CPPED1ENSG00000103381.72292.718304010.19390-0.8066011.169809.87680HepG2G3BP1
CPPED1ENSG00000103381.71494.315102211.77530-0.565703.871402.55440HepG2GRSF1
CPPED1ENSG00000103381.71879.516202686.97940-0.515609.980908.27870HepG2HDGF
CPPED1ENSG00000103381.72054.337602992.37580-0.5426012.8657011.13810HepG2HNRNPA2B1
CPPED1ENSG00000103381.72207.271502966.00750-0.4263011.5565010.26310HepG2HNRNPL
CPPED1ENSG00000103381.73585.488902809.135700.351901.917401.38510HepG2HNRNPLL
CPPED1ENSG00000103381.72855.328102462.990500.213103.419002.61010HepG2ILF2
CPPED1ENSG00000103381.73120.809904100.10000-0.393702.568401.60790HepG2KHSRP
CPPED1ENSG00000103381.73354.130004324.71280-0.366702.960702.28330HepG2MAGOH
CPPED1ENSG00000103381.73471.111804348.85290-0.325202.247901.67550HepG2MATR3
CPPED1ENSG00000103381.72752.705104451.24000-0.693408.825607.72960HepG2NCBP2
CPPED1ENSG00000103381.73128.914402169.855500.528002.409501.39510HepG2NONO
CPPED1ENSG00000103381.72446.036404215.60880-0.7853030.6300028.98220HepG2PCBP1
CPPED1ENSG00000103381.73687.646402718.980800.439502.510701.34580HepG2PRPF6
CPPED1ENSG00000103381.72855.051101822.383400.647607.615006.35480HepG2PRPF8
CPPED1ENSG00000103381.72770.849004289.46370-0.6305020.1060018.89030HepG2PTBP1
CPPED1ENSG00000103381.74934.302303082.046000.6789012.8840011.72560HepG2PUF60
CPPED1ENSG00000103381.72101.580103271.71850-0.6386025.0999023.68100HepG2PUM1
CPPED1ENSG00000103381.72163.781003269.33450-0.5954011.5101010.19300HepG2PUM2
CPPED1ENSG00000103381.73445.819502866.878700.265304.515603.76540HepG2PUS1
CPPED1ENSG00000103381.73097.546404645.75690-0.5848013.3387012.11630HepG2QKI
CPPED1ENSG00000103381.74167.665102495.782600.739605.102604.15990HepG2RAVER1
CPPED1ENSG00000103381.76989.901503957.098600.8207031.3721029.99970HepG2RBM22
CPPED1ENSG00000103381.73282.635504216.26190-0.361104.423303.58690HepG2RBM25
CPPED1ENSG00000103381.73109.797902118.297000.553805.549504.03880HepG2RCC2
CPPED1ENSG00000103381.73439.876004773.82430-0.472805.969705.22490HepG2NELFE
CPPED1ENSG00000103381.73174.298404446.05410-0.4861013.0593011.86780HepG2RECQL
CPPED1ENSG00000103381.75386.672704076.412700.402005.045004.15950HepG2RPLP0
CPPED1ENSG00000103381.73192.910502455.818600.378603.197702.03630HepG2RPS5
CPPED1ENSG00000103381.72301.302301802.687900.352202.273601.55380HepG2RRP9
CPPED1ENSG00000103381.72858.627503680.10890-0.364402.151001.55530HepG2SF3A3
CPPED1ENSG00000103381.73068.942104466.02150-0.5412015.7882014.55320HepG2SF3B4
CPPED1ENSG00000103381.73732.534002955.182200.336807.890806.79770HepG2SLBP
CPPED1ENSG00000103381.73048.358402504.189300.283605.760004.88610HepG2SMN1
CPPED1ENSG00000103381.71902.536003093.92670-0.701502.395501.67050HepG2SNRNP70
CPPED1ENSG00000103381.75103.310904469.457700.191203.189402.66420HepG2SRFBP1
CPPED1ENSG00000103381.75535.075204661.504000.247704.274603.71820HepG2SRSF1
CPPED1ENSG00000103381.73213.060903718.10690-0.210602.412401.75940HepG2SRSF7
CPPED1ENSG00000103381.72609.790103792.33390-0.5392016.0720014.93910HepG2SRSF9
CPPED1ENSG00000103381.76517.271303880.653100.7479019.7910018.68930HepG2SSB
CPPED1ENSG00000103381.71493.083402087.90040-0.483803.423502.18630HepG2STIP1
CPPED1ENSG00000103381.74706.360403460.807400.4434013.1736011.98320HepG2SUCLG1
CPPED1ENSG00000103381.72722.702804189.78730-0.6218015.5880014.41920HepG2TAF15
CPPED1ENSG00000103381.7963.941101576.40260-0.709607.990606.46890HepG2TFIP11
CPPED1ENSG00000103381.72639.135303850.00740-0.544809.520407.98640HepG2TIA1
CPPED1ENSG00000103381.73688.219902343.120700.6544014.0397013.06480HepG2TIAL1
CPPED1ENSG00000103381.71941.731302363.88550-0.283804.105203.44590HepG2TRIM56
CPPED1ENSG00000103381.74417.160003103.486500.509106.423405.48350HepG2U2AF1
CPPED1ENSG00000103381.74070.969903150.968000.369508.255307.30980HepG2UTP3
CPPED1ENSG00000103381.72858.054602315.269700.303802.019101.39130HepG2XRN2
CPPED1ENSG00000103381.73154.458602555.750400.303506.000605.07160HepG2ZC3H8
CPPED1ENSG00000103381.7731.91540543.758800.428602.081801.51280K562AKAP8L
CPPED1ENSG00000103381.7540.20830413.632200.385102.615301.34870K562BCCIP
CPPED1ENSG00000103381.7609.08750397.640600.615104.572603.44010K562BOP1
CPPED1ENSG00000103381.7658.61150407.308700.693206.541304.62370K562CIRBP
CPPED1ENSG00000103381.7888.92040500.924100.827405.339503.80180K562CNOT7
CPPED1ENSG00000103381.7993.57770670.089600.568207.699205.83230K562CPEB4
CPPED1ENSG00000103381.7446.63160325.601900.455902.494001.63010K562EFTUD2
CPPED1ENSG00000103381.71116.21780581.177700.9415019.9282018.25750K562EIF2S2
CPPED1ENSG00000103381.7599.76370430.181700.479303.181802.25940K562FMR1
CPPED1ENSG00000103381.7539.60350379.524300.507603.170101.83980K562HNRNPK
CPPED1ENSG00000103381.7393.93160611.97170-0.635506.766305.36540K562HNRNPU
CPPED1ENSG00000103381.7646.47670380.194000.765806.035304.27610K562IGF2BP2
CPPED1ENSG00000103381.7494.22110344.680000.519802.489701.60720K562KRR1
CPPED1ENSG00000103381.7581.44000394.052800.561104.410903.28730K562METAP2
CPPED1ENSG00000103381.7560.99180320.806500.806206.754504.56830K562NONO
CPPED1ENSG00000103381.7561.31630355.344800.659505.509104.12010K562PCBP2
CPPED1ENSG00000103381.7333.95130606.73030-0.861407.620506.24100K562PCBP3
CPPED1ENSG00000103381.7227.73790465.37310-1.0310011.8839010.28020K562POLR2G
CPPED1ENSG00000103381.7573.27030316.848000.855307.665006.40910K562PRPF8
CPPED1ENSG00000103381.7563.31150388.061900.537504.587703.75310K562PTBP1
CPPED1ENSG00000103381.7912.21520539.178600.758508.845007.92260K562PUS1
CPPED1ENSG00000103381.7598.64990372.017100.686206.371505.02600K562RBM22
CPPED1ENSG00000103381.7579.52540317.350800.868703.010701.73770K562SF1
CPPED1ENSG00000103381.7589.91470383.891700.619704.116702.91380K562SF3B1
CPPED1ENSG00000103381.7399.54060302.841100.399702.405201.61100K562SF3B4
CPPED1ENSG00000103381.7582.85880380.448100.615305.343704.36800K562SRSF1
CPPED1ENSG00000103381.7437.97180282.312200.633403.907102.56300K562U2AF1
CPPED1ENSG00000103381.7468.52600291.560500.684206.218805.02370K562U2AF2
CPPED1ENSG00000103381.71104.94240659.909100.7435010.498209.21370K562UPF1
CPPED1ENSG00000103381.7879.22110546.752700.685203.474601.96920K562UTP18
CPPED1ENSG00000103381.7674.54600463.516800.541203.556102.18810K562UTP3
CPPED1ENSG00000103381.7728.34310564.667000.367102.619901.76620K562WDR3
CPPED1ENSG00000103381.7991.91500773.522500.358702.811401.50650K562WRN
CPPED1ENSG00000103381.7453.14380330.619100.454702.533301.39160K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CPPED1 is not available on ENCORE database.





2 RBPs can affect the splicing of CPPED1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECPPED1ENSG00000103381.7chr16-127984801279890612756918127589721287504112875260-0.187000.000000.00000excludedHepG2SF3A3
SECPPED1ENSG00000103381.7chr16-127984801279890612756918127589721287504112875260-0.231000.000000.00000excludedHepG2SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CPPED1 is not avaliable on ENCORE database.