CFI

General Information

Gene Name       : CFI
Gene ID             : ENSG00000205403.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CFI)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CFIENSG00000205403.130.000.000.00ENCSR000AEF
HepG2CFIENSG00000205403.13201.69314.26257.98ENCSR985KAT
K562CFIENSG00000205403.130.420.670.55ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CFI is not avaliable on ENCORE database.



Proteins bound to RNA

  • CFI RNA is bound by 31 proteins.  







eCLIP assay for CFI is not avaliable on ENCORE database.





31 proteins are bound to CFI RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4110685674110685765-3'-UTR,CDS,intron-Distal,intron-Proximal5.1651240.28923HepG2GRWD1
chr4110685497110685552-3'-UTR,intron-Distal,intron-Proximal3.5556510.38879HepG2KHSRP
chr4110685586110685636-3'-UTR,intron-Distal,intron-Proximal4.522684.87318HepG2TIA1
chr4110661979110662021-3'-UTR,intron-Distal4.719584.25353HepG2TIA1
chr4110661993110662069-3'-UTR,CDS,intron-Distal6.2848111.96686HepG2DDX55
chr4110662021110662057-3'-UTR,CDS,intron-Distal3.925263.07706HepG2TIAL1
chr4110685552110685583-3'-UTR,intron-Distal3.9892822.45587HepG2KHSRP
chr4110685500110685583-3'-UTR,intron-Distal,intron-Proximal3.169724.53566HepG2QKI
chr4110685689110685703-3'-UTR,CDS,intron-Distal,intron-Proximal3.9030211.59302HepG2BCLAF1
chr4110685584110685681-3'-UTR,intron-Distal,intron-Proximal4.2097438.92793HepG2KHSRP
chr4110685528110685645-3'-UTR,intron-Distal,intron-Proximal3.6237710.13283HepG2FUBP3
chr4110661936110661979-3'-UTR,intron-Distal3.196546.02794HepG2ZC3H11A
chr4110685583110685610-3'-UTR,intron-Distal,intron-Proximal3.434293.65179HepG2QKI
chr4110685590110685672-3'-UTR,intron-Distal,intron-Proximal6.1701020.76894HepG2TIAL1
chr4110682750110682796-CDS,intron-Distal3.1720824.99439HepG2BCLAF1
chr4110681523110681535-CDS,intron-Distal4.309908.06090HepG2SND1
chr4110681683110681700-CDS,intron-Distal3.305624.83522HepG2ZNF800
chr4110681686110681695-CDS,intron-Distal4.7101426.91790HepG2BCLAF1
chr4110662200110662249-CDS,intron-Distal5.1224027.02540HepG2SND1
chr4110681397110681443-CDS,intron-Distal,intron-Proximal3.2965415.28899HepG2PRPF8
chr4110687871110687895-CDS,intron-Distal3.5902112.22938HepG2SND1
chr4110670472110670478-CDS,intron-Distal,intron-Proximal4.7393934.10260HepG2SND1
chr4110667417110667468-CDS,intron-Distal,intron-Proximal3.1860312.78042HepG2RPS3
chr4110670733110670758-CDS,intron-Distal5.2299423.58504HepG2BCLAF1
chr4110670373110670421-CDS,intron-Distal,intron-Proximal4.6830615.64728HepG2ZNF800
chr4110670739110670758-CDS,intron-Distal4.4779911.23424HepG2SND1
chr4110670373110670426-CDS,intron-Distal,intron-Proximal4.9369941.89548HepG2BCLAF1
chr4110662222110662260-CDS,intron-Distal4.1878413.02953HepG2BCLAF1
chr4110670654110670663-CDS,intron-Distal,intron-Proximal4.7185918.82521HepG2BCLAF1
chr4110681504110681536-CDS,intron-Distal3.048073.89757HepG2LSM11
chr4110663700110663726-CDS,intron-Distal4.9852414.65888HepG2BCLAF1
chr4110670426110670477-CDS,intron-Distal4.7534829.66430HepG2BCLAF1
chr4110682740110682750-CDS,intron-Distal3.9130119.82091HepG2BCLAF1
chr4110681747110681788-CDS,intron-Distal3.6330422.04889HepG2BCLAF1
chr4110663747110663750-CDS,intron-Distal3.483728.71292HepG2BCLAF1
chr4110662129110662179-CDS,intron-Distal4.2635319.03224HepG2SND1
chr4110667646110667658-CDS,intron-Distal4.3167119.61930HepG2BCLAF1
chr4110681678110681686-CDS,intron-Distal,intron-Proximal4.5547631.97947HepG2BCLAF1
chr4110681691110681765-CDS,intron-Distal3.0497515.13410HepG2PPIG
chr4110670732110670758-CDS,intron-Distal5.193447.98205HepG2ZNF800
chr4110681725110681747-CDS,intron-Distal4.1308321.93994HepG2BCLAF1
chr4110682672110682738-CDS,intron-Distal,intron-Proximal3.8338220.70430HepG2PPIG
chr4110682803110682873-CDS,intron-Distal,intron-Proximal3.2315836.15486HepG2U2AF2
chr4110662062110662097-CDS,intron-Distal4.045147.49193HepG2ZC3H11A
chr4110673623110673658-CDS,intron-Distal,intron-Proximal3.4985610.66738HepG2GRWD1
chr4110678919110678938-CDS,intron-Distal,intron-Proximal3.4551812.80369HepG2BCLAF1
chr4110678918110678924-CDS,intron-Distal,intron-Proximal3.068956.91015HepG2GRWD1
chr4110667644110667655-CDS,intron-Distal3.648347.31650HepG2SND1
chr4110670374110670420-CDS,intron-Distal4.1728219.26614HepG2SND1
chr4110670420110670472-CDS,intron-Distal4.5692441.44970HepG2SND1
chr4110667411110667476-CDS,intron-Distal,intron-Proximal3.3036626.02647HepG2BCLAF1
chr4110681761110681792-CDS,intron-Distal3.986683.15232HepG2LIN28B
chr4110687709110687736-CDS,intron-Distal,intron-Proximal3.4917810.78867HepG2BCLAF1
chr4110670654110670725-CDS,intron-Distal,intron-Proximal3.7577815.67099HepG2ZNF800
chr4110681693110681720-CDS,intron-Distal3.529816.89257HepG2LSM11
chr4110687790110687825-CDS,intron-Distal4.865518.99614HepG2RPS3
chr4110670663110670733-CDS,intron-Distal5.5731755.11581HepG2BCLAF1
chr4110678924110678939-CDS,intron-Distal,intron-Proximal3.010306.30405HepG2GRWD1
chr4110662123110662180-CDS,intron-Distal3.656895.06049HepG2ZC3H11A
chr4110682672110682707-CDS,intron-Distal,intron-Proximal4.6468040.63697HepG2BCLAF1
chr4110667605110667658-CDS,intron-Distal3.5206611.62654HepG2GRWD1
chr4110670451110670476-CDS,intron-Distal3.498568.10680HepG2GRWD1
chr4110673623110673644-CDS,intron-Distal,intron-Proximal4.9593820.34840HepG2SND1
chr4110681692110681726-CDS,intron-Distal3.438748.98272HepG2GRWD1
chr4110662132110662171-CDS,intron-Distal3.496793.24593HepG2XPO5
chr4110681425110681435-CDS,intron-Distal,intron-Proximal3.925929.67260HepG2BCLAF1
chr4110667588110667646-CDS,intron-Distal3.9628433.55343HepG2BCLAF1
chr4110685827110685844-CDS,intron-Distal3.5658811.30774HepG2BCLAF1
chr4110685765110685807-CDS,intron-Distal4.4060726.40838HepG2BCLAF1
chr4110667575110667659-CDS,intron-Distal,intron-Proximal3.5317611.56843HepG2ZNF800
chr4110667589110667619-CDS,intron-Distal3.7124910.29465HepG2SND1
chr4110681677110681736-CDS,intron-Distal,intron-Proximal3.820557.71112HepG2LIN28B
chr4110681499110681523-CDS,intron-Distal4.460159.20626HepG2SND1
chr4110681519110681536-CDS,intron-Distal4.0026323.84439HepG2BCLAF1
chr4110670654110670682-CDS,intron-Distal,intron-Proximal4.0509226.76553HepG2SND1
chr4110682707110682740-CDS,intron-Distal4.7637243.33340HepG2BCLAF1
chr4110682754110682775-CDS,intron-Distal3.9476612.35307HepG2SND1
chr4110681526110681536-CDS,intron-Distal3.535206.89519HepG2PPIG
chr4110663646110663669-CDS,intron-Distal,intron-Proximal5.8610516.99693HepG2BCLAF1
chr4110673623110673631-CDS,intron-Distal,intron-Proximal4.4607420.29031HepG2BCLAF1
chr4110685703110685733-CDS,intron-Distal4.4887721.09656HepG2BCLAF1
chr4110681502110681519-CDS,intron-Distal3.6560615.93129HepG2BCLAF1
chr4110685695110685775-CDS,intron-Distal3.4132512.98767HepG2ZNF800
chr4110682677110682743-CDS,intron-Distal3.2315217.02514HepG2GRWD1
chr4110673631110673645-CDS,intron-Distal4.8144423.15230HepG2BCLAF1
chr4110670373110670430-CDS,intron-Distal,intron-Proximal3.1225810.87939HepG2GRWD1
chr4110667419110667475-CDS,intron-Distal,intron-Proximal3.6866520.68685HepG2SND1
chr4110687868110687904-CDS,intron-Distal3.373075.62335HepG2RPS3
chr4110681712110681768-CDS,intron-Distal3.236896.55799HepG2PABPN1
chr4110663618110663652-CDS,intron-Distal,intron-Proximal4.358955.34978HepG2PRPF8
chr4110681425110681467-CDS,intron-Distal,intron-Proximal3.9075913.63582HepG2SND1
chr4110681726110681789-CDS,intron-Distal3.8269115.15926HepG2GRWD1
chr4110667377110667406-CDS,intron-Distal,intron-Proximal5.1365621.91851HepG2SND1
chr4110670727110670759-CDS,intron-Distal,intron-Proximal3.266424.62564HepG2FXR2
chr4110662119110662172-CDS,intron-Distal3.2966410.04254HepG2RPS3
chr4110685694110685751-CDS,intron-Distal4.2067931.71729HepG2SND1
chr4110685733110685765-CDS,intron-Distal4.7909629.66430HepG2BCLAF1
chr4110685697110685759-CDS,intron-Distal3.2791411.44181HepG2RPS3
chr4110667377110667411-CDS,intron-Distal,intron-Proximal4.1733120.03381HepG2BCLAF1
chr4110681677110681691-CDS,intron-Distal,intron-Proximal3.493089.16247HepG2PPIG
chr4110673623110673651-CDS,intron-Distal,intron-Proximal4.082245.46429HepG2ZNF800
chr4110681695110681725-CDS,intron-Distal4.7710237.57711HepG2BCLAF1
chr4110670440110670477-CDS,intron-Distal3.444938.57761HepG2ZNF800
chr4110662140110662194-CDS,intron-Distal3.865595.29689HepG2PABPN1
chr4110678918110678939-CDS,intron-Distal,intron-Proximal4.8746915.34287HepG2SND1
chr4110663731110663751-CDS,intron-Distal5.1205917.11207HepG2SND1
chr4110677413110677487-intron-Distal4.011335.58751HepG2MATR3
chr4110716314110716382-intron-Distal3.611674.36087HepG2MATR3
chr4110682604110682662-intron-Distal,intron-Proximal3.254743.71919HepG2TIAL1
chr4110715197110715241-intron-Distal3.475093.34034HepG2HLTF
chr4110703359110703443-intron-Distal3.376215.70573HepG2MATR3
chr4110716304110716353-intron-Distal4.399124.61447HepG2SUGP2
chr4110677430110677500-intron-Distal5.3567322.42956HepG2PTBP1
chr4110680652110680740-intron-Distal3.934973.27714HepG2HNRNPL
chr4110716655110716722-intron-Distal4.724056.05753HepG2SUGP2
chr4110718283110718330-intron-Distal4.477535.58061HepG2SUGP2
chr4110717763110717792-intron-Distal3.885023.63454HepG2SUGP2
chr4110683640110683718-intron-Distal3.9144569.10268HepG2U2AF2
chr4110716376110716497-intron-Distal4.7296710.60103HepG2SUGP2
chr4110715135110715197-intron-Distal3.807764.70379HepG2HLTF
chr4110677995110678072-intron-Distal6.3366955.82625HepG2PTBP1
chr4110716342110716439-intron-Distal4.349066.73856HepG2XPO5
chr4110684366110684389-intron-Distal3.318466.36816HepG2QKI
chr4110676243110676316-intron-Distal3.690813.00914HepG2PTBP1
chr4110698373110698422-intron-Distal3.763215.28137HepG2MATR3
chr4110695625110695690-intron-Distal4.172823.82414HepG2HNRNPK
chr4110700944110701013-intron-Distal3.946833.16028HepG2SUGP2
chr4110712317110712378-intron-Distal3.306573.34034HepG2HLTF
chr4110712997110713079-intron-Distal3.351977.45062HepG2HLTF
chr4110719300110719373-intron-Distal4.4525510.78806HepG2QKI
chr4110714903110715016-intron-Distal4.4637310.25789HepG2HLTF
chr4110700929110701033-intron-Distal5.182988.46785HepG2MATR3
chr4110718286110718347-intron-Distal3.516693.68462HepG2MATR3
chr4110704871110704950-intron-Distal3.920213.79098HepG2SUGP2
chr4110718483110718534-intron-Distal4.243954.61447HepG2SUGP2
chr4110716998110717078-intron-Distal5.127737.59209HepG2SUGP2
chr4110692826110692877-intron-Distal3.069454.76325HepG2HNRNPC
chr4110702679110702714-intron-Distal3.931733.24322HepG2MATR3
chr4110676128110676222-intron-Distal3.897496.35227HepG2HNRNPL
chr4110703384110703435-intron-Distal3.530635.08575HepG2SUGP2
chr4110716362110716453-intron-Distal5.4615517.92612HepG2HNRNPM
chr4110705464110705566-intron-Distal3.515844.19039HepG2PTBP1
chr4110693028110693135-intron-Distal3.568165.60662HepG2PCBP2
chr4110716398110716489-intron-Distal5.5220110.77096HepG2MATR3
chr4110678610110678692-intron-Distal3.202993.76460HepG2HNRNPL
chr4110701406110701452-intron-Distal3.708004.87826HepG2MATR3
chr4110713662110713716-intron-Distal3.316268.52605HepG2HLTF
chr4110701392110701447-intron-Distal3.176094.67779HepG2SUGP2
chr4110720707110720821-intron-Distal3.087106.86487HepG2HNRNPL
chr4110693815110693898-intron-Distal3.486867.56449HepG2ILF3
chr4110702787110702871-intron-Distal3.300214.46039HepG2MATR3
chr4110703338110703384-intron-Distal4.427414.86548HepG2SUGP2
chr4110716547110716602-intron-Distal4.283254.53347HepG2SUGP2
chr4110677403110677493-intron-Distal6.1055110.65318HepG2PCBP2
chr4110718686110718760-intron-Distal4.765746.25174HepG2MATR3
chr4110710475110710563-intron-Distal4.173693.86809HepG2SUGP2
chr4110677500110677588-intron-Distal5.5121120.81865HepG2PTBP1
chr4110718264110718377-intron-Distal4.410484.90578HepG2HNRNPM
chr4110684925110685004-intron-Distal4.777874.32097HepG2FUBP3
chr4110684596110684643-intron-Distal3.2694314.34401HepG2U2AF2
chr4110717909110717975-intron-Distal3.664737.20487HepG2SUGP2
chr4110682863110682904-intron-Distal,intron-Proximal3.5797517.44370HepG2SF3A3
chr4110695408110695489-intron-Distal4.503724.51080HepG2HNRNPL
chr4110717139110717174-intron-Distal4.375465.04879HepG2SUGP2
chr4110717005110717083-intron-Distal3.131693.83994HepG2MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CFI is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CFI is not available on ENCORE database.

  • 98 RBPs can affect the levels of CFI.  








The Knockdown/knockout RNA-Seq assay for CFI is not available on ENCORE database.





98 RBPs can affect the gene expression of CFI :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CFIENSG00000205403.88543.052207087.095900.269502.485201.46630HepG2AATF
CFIENSG00000205403.812771.6865010331.187100.305802.705501.77280HepG2ABCF1
CFIENSG00000205403.84611.091207605.55900-0.7219035.3271033.74790HepG2ACO1
CFIENSG00000205403.85882.5036010104.28070-0.7805010.368609.40410HepG2AKAP1
CFIENSG00000205403.88631.1242010064.18850-0.221603.561502.79940HepG2AUH
CFIENSG00000205403.87333.571105865.937400.322102.403001.56760HepG2BCLAF1
CFIENSG00000205403.810508.743607741.729700.440806.825004.96230HepG2BUD13
CFIENSG00000205403.814077.200109673.089300.541206.295905.19320HepG2CALR
CFIENSG00000205403.816626.8796013096.419500.344202.212501.34910HepG2CCAR1
CFIENSG00000205403.812753.770707943.141200.6830010.777209.34330HepG2CIRBP
CFIENSG00000205403.83698.937509107.11740-1.2999016.6703014.85230HepG2CNOT7
CFIENSG00000205403.814773.511506470.525101.1910033.8522031.81030HepG2CPSF6
CFIENSG00000205403.86777.1294010753.79730-0.6661023.7682022.26540HepG2CELF1
CFIENSG00000205403.810288.445107821.520800.395404.852103.98070HepG2DDX21
CFIENSG00000205403.812083.438207652.049300.6590015.1136013.10250HepG2DDX24
CFIENSG00000205403.812035.821609679.629000.314202.526501.92670HepG2DDX3X
CFIENSG00000205403.811821.380607276.524200.7000030.8575029.22760HepG2DKC1
CFIENSG00000205403.813580.691308646.134000.6513010.662909.00780HepG2EEF2
CFIENSG00000205403.89478.332607200.862500.396402.773701.66560HepG2AGO1
CFIENSG00000205403.86398.242707993.44890-0.321102.547501.97860HepG2EIF2S1
CFIENSG00000205403.89992.517207384.888900.436206.966705.38080HepG2EIF3G
CFIENSG00000205403.815930.8945010927.820200.543707.768306.43230HepG2EIF4G2
CFIENSG00000205403.811394.339208950.526700.348203.985502.69340HepG2ESF1
CFIENSG00000205403.89199.1283011555.08580-0.329007.665606.74960HepG2ETF1
CFIENSG00000205403.89403.030707432.214000.339204.152003.12920HepG2EWSR1
CFIENSG00000205403.86878.702805524.129800.316302.854201.56460HepG2FKBP4
CFIENSG00000205403.84154.864006481.94930-0.641602.758601.74510HepG2FTO
CFIENSG00000205403.813617.364609712.801400.487403.402502.16290HepG2FUS
CFIENSG00000205403.87691.357006249.671100.299402.553701.69780HepG2GEMIN5
CFIENSG00000205403.812532.808107334.405000.7729011.4554010.22550HepG2GPKOW
CFIENSG00000205403.810595.136508050.387700.396203.555101.41010HepG2GRWD1
CFIENSG00000205403.88474.652507261.284600.222803.571102.47110HepG2HDGF
CFIENSG00000205403.85499.975207698.52750-0.485203.439401.90220HepG2HNRNPA0
CFIENSG00000205403.810364.008708261.167200.327102.861902.20440HepG2HNRNPA1
CFIENSG00000205403.814976.7305010626.840800.4949015.5052013.65840HepG2HNRNPA2B1
CFIENSG00000205403.812655.584009189.159700.461706.751405.70540HepG2HNRNPC
CFIENSG00000205403.89944.687309013.975300.141701.961601.35050HepG2HNRNPF
CFIENSG00000205403.810847.123408369.832300.373904.127503.28860HepG2HNRNPK
CFIENSG00000205403.85755.397007198.87140-0.322903.596502.52290HepG2HNRNPM
CFIENSG00000205403.87158.544609128.39620-0.350708.506407.48610HepG2HNRNPU
CFIENSG00000205403.813081.337808404.358100.638209.169108.01930HepG2IGF2BP2
CFIENSG00000205403.811517.947908452.758500.446303.432202.29950HepG2KHSRP
CFIENSG00000205403.816098.1316011748.523000.454303.393202.00690HepG2KRR1
CFIENSG00000205403.86653.680508964.98360-0.430103.710402.99010HepG2MATR3
CFIENSG00000205403.814448.224607139.436101.016908.811307.05820HepG2MTPAP
CFIENSG00000205403.89255.288707090.790900.384205.118803.48010HepG2NAA15
CFIENSG00000205403.813316.182409176.382000.537106.117205.19220HepG2NCBP2
CFIENSG00000205403.811221.116606206.623500.8542018.8136017.08020HepG2NSUN2
CFIENSG00000205403.84015.562508323.13140-1.051509.832308.11890HepG2PABPC1
CFIENSG00000205403.810003.061508173.190100.291402.195801.54710HepG2PABPC4
CFIENSG00000205403.810198.052108398.243500.280005.761004.93600HepG2PCBP1
CFIENSG00000205403.816383.384309195.090400.833208.204906.51650HepG2PCBP2
CFIENSG00000205403.810697.271008141.775800.393707.933606.73590HepG2PPIL4
CFIENSG00000205403.88796.058505121.448700.7802014.1362012.51500HepG2PRPF8
CFIENSG00000205403.89755.032408545.760200.190802.851102.29750HepG2PTBP1
CFIENSG00000205403.813207.5066011618.840500.184804.010203.32440HepG2PUM1
CFIENSG00000205403.85445.412509254.77190-0.7652024.4546022.85780HepG2QKI
CFIENSG00000205403.83329.822608874.96380-1.4143011.8182010.43740HepG2RAVER1
CFIENSG00000205403.87355.204509657.90300-0.392902.914802.38670HepG2RBM22
CFIENSG00000205403.812328.436908858.012500.4768016.0014014.72110HepG2RECQL
CFIENSG00000205403.812127.451109709.280100.320703.513702.75900HepG2RPLP0
CFIENSG00000205403.87149.310509447.79050-0.402203.027902.19070HepG2RPS2
CFIENSG00000205403.812182.317409142.548500.414002.788801.98620HepG2RPS3A
CFIENSG00000205403.814059.975809651.852100.542603.697001.92440HepG2RTF1
CFIENSG00000205403.817620.8987010875.920100.696107.108605.99170HepG2SF3A3
CFIENSG00000205403.89032.218206927.767300.382604.200203.34750HepG2SF3B1
CFIENSG00000205403.810280.773208896.820900.208503.479602.82640HepG2SF3B4
CFIENSG00000205403.88415.626309479.83530-0.171803.613502.89480HepG2SMN1
CFIENSG00000205403.813290.944507708.446900.785807.346506.06860HepG2SNRNP70
CFIENSG00000205403.89653.357706321.370200.610708.849306.27120HepG2SRP68
CFIENSG00000205403.816132.980909286.525700.7967043.3829042.00270HepG2SRSF1
CFIENSG00000205403.810131.670007455.022700.442503.630802.46950HepG2SRSF3
CFIENSG00000205403.812938.7332010806.788500.259705.008304.20560HepG2SRSF5
CFIENSG00000205403.810602.697208855.706700.259705.261304.35090HepG2SRSF7
CFIENSG00000205403.814370.7788012290.401800.225505.220904.41300HepG2SUCLG1
CFIENSG00000205403.88638.441207045.775500.293903.636102.56840HepG2SUPT6H
CFIENSG00000205403.88207.981306606.859700.313003.003502.30220HepG2SUPV3L1
CFIENSG00000205403.812284.201308347.565500.5573015.6105014.44120HepG2TAF15
CFIENSG00000205403.813639.754806823.410400.9992023.1207021.41530HepG2TARDBP
CFIENSG00000205403.86133.058204428.727700.469605.141603.84430HepG2TFIP11
CFIENSG00000205403.813544.081607669.772500.8203014.7918012.89260HepG2TIA1
CFIENSG00000205403.85209.985508949.26700-0.7805037.2391035.47050HepG2TRIM56
CFIENSG00000205403.814649.6636010692.948400.454107.659006.09400HepG2TUFM
CFIENSG00000205403.86891.987308925.10530-0.372903.652602.93470HepG2U2AF1
CFIENSG00000205403.81942.788103903.30280-1.006608.856807.49480HepG2UCHL5
CFIENSG00000205403.817106.922609645.253100.8266050.7161048.55080HepG2UPF1
CFIENSG00000205403.87549.962906051.509100.319102.329701.41470HepG2UPF2
CFIENSG00000205403.813321.319609914.160200.4261010.956909.05020HepG2UTP18
CFIENSG00000205403.813439.852209312.151500.5292015.8894014.62870HepG2UTP3
CFIENSG00000205403.89226.154806866.200900.4261015.7711014.38270HepG2ZC3H8
CFIENSG00000205403.812316.1712010607.967700.215305.330704.63380HepG2ZNF622
CFIENSG00000205403.818.259702.745102.733602.480201.48430K562CNOT7
CFIENSG00000205403.839.183304.032603.280407.044505.97360K562EIF2S2
CFIENSG00000205403.844.157105.378303.037305.780804.68340K562GRSF1
CFIENSG00000205403.88.7198039.22260-2.169302.625201.89600K562NSUN2
CFIENSG00000205403.83.0235036.21500-3.582304.571802.10400K562NUFIP2
CFIENSG00000205403.833.051502.637303.647505.574003.80510K562PABPC1
CFIENSG00000205403.816.694600.978304.092903.011002.22840K562PRPF8
CFIENSG00000205403.829.913205.039602.569303.697502.58570K562PUM2
CFIENSG00000205403.85.1887039.67740-2.934903.940302.84340K562SRPK2
CFIENSG00000205403.885.4612041.589801.038902.532901.84400K562UPF1
CFIENSG00000205403.84.7381035.58510-2.908903.679002.67020K562WDR3
CFIENSG00000205403.83.9879037.01810-3.214504.304003.26570K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CFI is not available on ENCORE database.





3 RBPs can affect the splicing of CFI :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECFIENSG00000205403.8chr4-110679091110679115110678918110678939110681425110681536-0.086000.009260.08594excludedHepG2U2AF2
SECFIENSG00000205403.8chr4-1106789181106789391106736231106736591106814251106815360.081000.000420.02388includedHepG2SFPQ
MXECFIENSG00000205403.8chr4-110689710110689912110715385110715581110687709110687980110723070110723207-0.335000.003470.084152includedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CFI is not avaliable on ENCORE database.