C16orf80

General Information

Gene Name : C16orf80
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: C16orf80)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for C16orf80 is not avaliable on ENCORE database.

Proteins bound to RNA

C16orf80 RNA is bound by 10 proteins.

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eCLIP assay for C16orf80 is not avaliable on ENCORE database.

10 proteins are bound to C16orf80 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	58163135	58163207	-	5'-UTR,intron-Distal,intron-Proximal	4.24709	12.87855	K562	DDX3X
chr16	58149320	58149362	-	CDS,intron-Distal,intron-Proximal	5.13453	9.30647	K562	LIN28B
chr16	58147750	58147855	-	3'-UTR,intron-Distal,intron-Proximal	4.15755	8.81208	HepG2	LARP4
chr16	58147522	58147560	-	3'-UTR,intron-Distal	4.41838	8.29571	K562	PUM2
chr16	58147701	58147811	-	3'-UTR,intron-Distal,intron-Proximal	4.89920	7.65820	K562	LIN28B
chr16	58162842	58162923	-	intron-Distal	4.31028	7.58816	HepG2	RBFOX2
chr16	58163207	58163256	-	5'-UTR,intron-Distal,intron-Proximal	3.53395	7.11978	K562	DDX3X
chr16	58162659	58162737	-	intron-Distal	4.67524	6.57830	K562	RBFOX2
chr16	58162855	58162927	-	intron-Distal	5.62942	6.41139	HepG2	EFTUD2
chr16	58149942	58149965	-	CDS,intron-Distal,intron-Proximal	4.78859	6.40168	K562	LIN28B
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 18 entries

eCLIP assay for C16orf80 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for C16orf80 is not available on ENCORE database.
75 RBPs can affect the levels of C16orf80.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for C16orf80 is not available on ENCORE database.

75 RBPs can affect the gene expression of C16orf80 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
C16orf80	ENSG00000070761.3	346.70960	1136.42720	-1.71270	63.16370	60.93820	HepG2	SUCLG1
C16orf80	ENSG00000070761.3	667.91360	1804.70690	-1.43400	35.17220	33.46080	HepG2	BOP1
C16orf80	ENSG00000070761.3	657.39070	1332.87170	-1.01970	33.80100	32.43740	HepG2	ZNF622
C16orf80	ENSG00000070761.3	832.53280	1792.27020	-1.10620	19.49380	18.05130	HepG2	HNRNPLL
C16orf80	ENSG00000070761.3	245.76240	654.94790	-1.41410	17.23080	15.79240	HepG2	SUPV3L1
C16orf80	ENSG00000070761.3	781.51720	1387.47610	-0.82810	15.71850	12.76960	K562	SUCLG1
C16orf80	ENSG00000070761.3	657.49880	1214.58280	-0.88540	13.76380	12.10780	HepG2	MSI2
C16orf80	ENSG00000070761.3	707.04650	1331.05560	-0.91270	12.84630	10.91300	K562	BOP1
C16orf80	ENSG00000070761.3	2346.43490	1401.78040	0.74310	11.38050	10.32620	K562	PUS1
C16orf80	ENSG00000070761.3	1029.81250	1878.05800	-0.86690	11.17750	9.95720	HepG2	GPKOW
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 91 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for C16orf80 is not available on ENCORE database.

10 RBPs can affect the splicing of C16orf80 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	C16orf80	ENSG00000070761.3	chr16	-	58148713	58148908	58148713	58148824	58149172	58149361	0.43700	0.00000	0.00000	longer	K562	AQR
A3SS	C16orf80	ENSG00000070761.3	chr16	-	58150775	58150969	58150775	58150855	58162935	58163265	0.06300	0.00000	0.00001	longer	K562	AQR
RI	C16orf80	ENSG00000070761.3	chr16	-	58148713	58149361	58148713	58148824	58149172	58149361	0.35600	0.00000	0.00000	included	K562	PUS1
RI	C16orf80	ENSG00000070761.3	chr16	-	58148713	58149361	58148713	58148824	58149172	58149361	0.12800	0.00000	0.00010	included	K562	AGGF1
RI	C16orf80	ENSG00000070761.3	chr16	-	58148713	58149361	58148713	58148824	58149172	58149361	0.12600	0.00000	0.00012	included	K562	RBM15
RI	C16orf80	ENSG00000070761.3	chr16	-	58148713	58149361	58148713	58148824	58149172	58149361	0.48700	0.00000	0.00000	included	K562	AQR
A3SS	C16orf80	ENSG00000070761.3	chr16	-	58149944	58150102	58149944	58150056	58150775	58150855	0.05100	0.00001	0.00010	longer	K562	AQR
RI	C16orf80	ENSG00000070761.3	chr16	-	58148713	58149361	58148713	58148824	58149172	58149361	0.12000	0.00001	0.00019	included	K562	AKAP8L
RI	C16orf80	ENSG00000070761.3	chr16	-	58148713	58149361	58148713	58148824	58149172	58149361	0.12400	0.00002	0.00047	included	K562	UTP18
A3SS	C16orf80	ENSG00000070761.3	chr16	-	58148713	58148945	58148713	58148824	58149172	58149361	0.09300	0.00019	0.01979	longer	HepG2	SF3A3

Showing 1 to 10 of 16 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

C16orf80

General Information

Functions

Localization

Domains (AlphaFold: C16orf80)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for C16orf80 is not avaliable on ENCORE database.

10 proteins are bound to C16orf80 RNA:

eCLIP assay for C16orf80 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for C16orf80 is not available on ENCORE database.

75 RBPs can affect the gene expression of C16orf80 :

The Knockdown/knockout RNA-Seq assay for C16orf80 is not available on ENCORE database.

10 RBPs can affect the splicing of C16orf80 :

The Knockdown/knockout RNA-Seq assay for C16orf80 is not avaliable on ENCORE database.