BTRC

General Information

Gene Name       : BTRC
Gene ID             : ENSG00000166167.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BTRC)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BTRCENSG00000166167.177.116.016.56ENCSR000AEF
HepG2BTRCENSG00000166167.177.199.788.48ENCSR985KAT
K562BTRCENSG00000166167.174.645.314.97ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BTRC is not avaliable on ENCORE database.



Proteins bound to RNA
  • BTRC RNA is bound by 16 proteins.  







eCLIP assay for BTRC is not avaliable on ENCORE database.





16 proteins are bound to BTRC RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10103316143103316207+3'-UTR3.786453.95400K562UPF1
chr10103316265103316310+3'-UTR3.456094.91593K562FAM120A
chr10103316153103316207+3'-UTR4.8353111.42186K562FAM120A
chr10103313142103313214+3'-UTR5.195195.77028HepG2PCBP2
chr10103315550103315622+3'-UTR4.680704.90799K562UPF1
chr10103313259103313403+3'-UTR4.824574.64560K562FAM120A
chr10103316207103316244+3'-UTR4.333535.53799K562FAM120A
chr10103113838103113988+5'-UTR,CDS,intron-Proximal3.244425.38934HepG2NCBP2
chr10103113835103113896+5'-UTR4.403943.96674K562NCBP2
chr10103281373103281440+CDS,intron-Proximal4.871865.81672HepG2U2AF2
chr10103221739103221816+CDS,intron-Distal,intron-Proximal3.904303.80193HepG2GRWD1
chr10103190190103190240+CDS,intron-Distal,intron-Proximal4.531285.01842HepG2PRPF8
chr10103221744103221819+CDS,intron-Distal,intron-Proximal3.287864.34695HepG2BCLAF1
chr10103292715103292818+CDS3.345604.34695HepG2BCLAF1
chr10103281487103281630+CDS,intron-Proximal3.056563.69775K562YBX3
chr10103239122103239212+CDS,intron-Proximal4.130834.69071HepG2GRWD1
chr10103239123103239216+CDS,intron-Proximal3.385595.79905HepG2BCLAF1
chr10103141141103141247+intron-Distal4.439563.16986HepG2QKI
chr10103180102103180208+intron-Distal5.020535.83981HepG2RBFOX2
chr10103264430103264546+intron-Distal6.4380622.10521HepG2PTBP1
chr10103264234103264386+intron-Distal5.4230819.66641HepG2PCBP2
chr10103232022103232156+intron-Distal3.546304.78196HepG2PTBP1
chr10103253348103253396+intron-Distal4.537524.30850HepG2QKI
chr10103114122103114244+intron-Distal4.869478.06849HepG2PRPF4
chr10103264439103264549+intron-Distal3.8138711.13151K562PTBP1
chr10103160620103160686+intron-Distal3.583303.89405HepG2PTBP1
chr10103189297103189422+intron-Distal4.669353.42734K562PTBP1
chr10103249947103250114+intron-Distal3.897833.33062K562ILF3
chr10103249936103250105+intron-Distal6.5329715.61406HepG2PCBP2
chr10103189309103189443+intron-Distal5.4736111.82650HepG2PTBP1
chr10103248527103248595+intron-Distal4.605108.08030HepG2QKI
chr10103264163103264234+intron-Distal4.293387.31085HepG2PCBP2
chr10103137003103137131+intron-Distal3.945313.42844K562KHSRP
chr10103114473103114579+intron-Distal4.641777.00579HepG2PRPF4
chr10103180208103180332+intron-Distal4.560244.50934HepG2RBFOX2
chr10103114135103114219+intron-Distal4.179414.41148HepG2GTF2F1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BTRC is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BTRC is not available on ENCORE database.

  • 79 RBPs can affect the levels of BTRC.  








The Knockdown/knockout RNA-Seq assay for BTRC is not available on ENCORE database.





79 RBPs can affect the gene expression of BTRC :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BTRCENSG00000166167.131450.535201128.058600.362604.669803.81850HepG2AUH
BTRCENSG00000166167.13380.50270598.30080-0.653004.391603.28220HepG2BCLAF1
BTRCENSG00000166167.13653.408901135.77420-0.797607.023305.46160HepG2CCAR1
BTRCENSG00000166167.13534.02700731.42720-0.453803.021702.30740HepG2CPSF6
BTRCENSG00000166167.13259.32340425.32280-0.713805.119503.71750HepG2CSTF2
BTRCENSG00000166167.13835.027801042.93890-0.320803.641002.81010HepG2DAZAP1
BTRCENSG00000166167.13932.62670763.732200.288103.030902.16090HepG2DDX19B
BTRCENSG00000166167.13463.69230718.66370-0.632107.633006.51180HepG2DNAJC21
BTRCENSG00000166167.13592.46090712.31810-0.265802.228601.63090HepG2DNAJC2
BTRCENSG00000166167.13678.780701058.78780-0.641405.780904.94200HepG2EIF2S1
BTRCENSG00000166167.13691.481901170.18420-0.759006.499305.51900HepG2EIF4A3
BTRCENSG00000166167.13613.59290806.94730-0.395203.075602.19810HepG2EWSR1
BTRCENSG00000166167.13634.493601095.12110-0.787407.967206.86950HepG2G3BP1
BTRCENSG00000166167.13636.21150788.39040-0.309402.727601.75600HepG2HDGF
BTRCENSG00000166167.13648.60200807.03890-0.315301.908801.32100HepG2HNRNPC
BTRCENSG00000166167.13882.221201108.54070-0.329402.151901.53040HepG2HNRNPK
BTRCENSG00000166167.13803.99280950.01160-0.240802.062201.46970HepG2HNRNPL
BTRCENSG00000166167.13745.587701113.22280-0.578303.395502.65440HepG2IGF2BP2
BTRCENSG00000166167.13588.95710780.52770-0.406302.731801.60540HepG2LARP7
BTRCENSG00000166167.13636.369501180.77740-0.8918010.622109.36320HepG2MAGOH
BTRCENSG00000166167.13799.248801187.43490-0.571104.458603.67540HepG2MATR3
BTRCENSG00000166167.13515.182201034.18060-1.0053019.1807017.28450HepG2NOL12
BTRCENSG00000166167.13639.86250793.54870-0.310602.628801.79980HepG2PARN
BTRCENSG00000166167.13855.377401076.50920-0.331703.645802.96950HepG2PCBP1
BTRCENSG00000166167.13528.22120735.07780-0.476805.286704.25170HepG2PRPF4
BTRCENSG00000166167.13491.99000890.82760-0.856504.619402.33660HepG2PSIP1
BTRCENSG00000166167.13904.982101095.35730-0.275402.597702.06450HepG2PTBP1
BTRCENSG00000166167.13658.086101048.02600-0.6713013.2697012.17580HepG2PUM1
BTRCENSG00000166167.13503.19860861.34740-0.775504.370303.49510HepG2RAVER1
BTRCENSG00000166167.13623.71780941.17610-0.593605.001703.64890HepG2RBM27
BTRCENSG00000166167.131033.556901219.05330-0.238102.150001.66130HepG2NELFE
BTRCENSG00000166167.13531.65740713.95210-0.425304.464403.67930HepG2SAFB2
BTRCENSG00000166167.13712.402801140.46400-0.6789012.0044010.91020HepG2SF3B4
BTRCENSG00000166167.13636.76910832.58860-0.386804.473303.69060HepG2SMN1
BTRCENSG00000166167.13791.21430968.41370-0.291602.964602.39740HepG2SRSF9
BTRCENSG00000166167.13544.96710785.96830-0.528306.799605.98350HepG2TRIM56
BTRCENSG00000166167.13279.04000398.11590-0.512702.788002.02490HepG2UCHL5
BTRCENSG00000166167.13679.70490925.35300-0.445105.311804.52680HepG2UTP3
BTRCENSG00000166167.13845.078301054.11930-0.318903.886403.26760HepG2ZNF622
BTRCENSG00000166167.13270.21380639.26170-1.242307.907707.01780K562AGGF1
BTRCENSG00000166167.13296.72100665.15610-1.164609.712208.39510K562AKAP8L
BTRCENSG00000166167.131093.49440805.090500.441603.869902.36830K562APOBEC3C
BTRCENSG00000166167.131083.55000819.076500.403602.890402.29160K562AQR
BTRCENSG00000166167.13400.75330697.86220-0.800205.546504.20080K562ATP5C1
BTRCENSG00000166167.13322.29920455.41400-0.498803.739602.61510K562BCLAF1
BTRCENSG00000166167.13779.65940503.601700.630505.351904.12690K562BOP1
BTRCENSG00000166167.131549.95510729.537901.0871032.4877030.50830K562DDX47
BTRCENSG00000166167.13514.42390647.16510-0.331202.498801.80910K562EIF2S2
BTRCENSG00000166167.13468.75210260.082500.849804.243602.97240K562EIF3A
BTRCENSG00000166167.13792.74830449.792200.817505.291203.80390K562EIF3D
BTRCENSG00000166167.13610.46120475.690400.359802.638201.85900K562EIF3G
BTRCENSG00000166167.131196.12400912.389400.390504.763603.54570K562EIF4G2
BTRCENSG00000166167.13594.88730348.975600.769409.134008.10810K562FXR1
BTRCENSG00000166167.13294.34900494.17000-0.747506.782204.41830K562G3BP1
BTRCENSG00000166167.13674.82040511.241400.400402.663601.88310K562GPKOW
BTRCENSG00000166167.13718.38550449.378100.676707.515305.82270K562HNRNPA1
BTRCENSG00000166167.13328.63520619.65770-0.915004.413102.76680K562HNRNPA2B1
BTRCENSG00000166167.13471.41850353.240900.416302.433601.86970K562HNRNPC
BTRCENSG00000166167.13349.51070516.79540-0.564303.251002.10620K562IGF2BP2
BTRCENSG00000166167.13440.09630705.98330-0.681802.945702.09160K562KIF1C
BTRCENSG00000166167.13683.61340436.540800.647004.140102.97660K562KRR1
BTRCENSG00000166167.13468.82790675.72960-0.527402.300701.34990K562MAK16
BTRCENSG00000166167.13568.49110790.86750-0.476302.124501.34350K562MBNL1
BTRCENSG00000166167.13728.85010525.587700.471605.049703.98330K562MTPAP
BTRCENSG00000166167.13311.03640554.33330-0.833705.875504.41610K562NAA15
BTRCENSG00000166167.13302.19510542.12960-0.843203.665902.48160K562PABPN1
BTRCENSG00000166167.13858.39270616.791800.476803.218002.32100K562PCBP3
BTRCENSG00000166167.13624.98080473.104300.401602.847402.03420K562POLR2G
BTRCENSG00000166167.13567.77760745.26500-0.392402.594501.80390K562PPIG
BTRCENSG00000166167.13195.59530316.70760-0.695303.744602.67010K562PSIP1
BTRCENSG00000166167.131470.33260995.498800.562606.385505.14680K562PUF60
BTRCENSG00000166167.131347.511901037.485900.377104.501203.26820K562PUM2
BTRCENSG00000166167.13273.55920659.82880-1.270209.555708.59540K562PUS1
BTRCENSG00000166167.13348.58800642.75750-0.882806.272905.40450K562RBM15
BTRCENSG00000166167.13339.64890666.98000-0.973604.492702.41970K562RBM39
BTRCENSG00000166167.13663.58270416.407700.672205.089403.97840K562RPS19
BTRCENSG00000166167.13583.84240259.481701.1698011.864009.67540K562RPS3
BTRCENSG00000166167.13742.45690576.227000.365603.021102.17150K562SF3A3
BTRCENSG00000166167.13764.76490486.214800.653305.013103.68120K562SF3B1
BTRCENSG00000166167.13281.85360373.53000-0.406302.322001.53990K562SF3B4
BTRCENSG00000166167.13745.95640590.355000.337403.034702.06020K562SRPK2
BTRCENSG00000166167.13632.61830474.530500.414703.182902.30270K562SYNCRIP
BTRCENSG00000166167.13363.30760523.64780-0.527403.616502.80340K562TARDBP
BTRCENSG00000166167.13786.81260619.215700.345503.108202.34810K562UPF1
BTRCENSG00000166167.13903.45200674.247700.422102.584301.42800K562UTP3
BTRCENSG00000166167.13733.63830550.964400.413004.367503.32240K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BTRC is not available on ENCORE database.





5 RBPs can affect the splicing of BTRC :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBTRCENSG00000166167.13chr10+103290993103291090103285769103285956103292051103292189-0.078000.004060.04501excludedHepG2U2AF2
SEBTRCENSG00000166167.13chr10+103190101103190209103113825103113985103221737103221815-0.360000.000440.00701excludedHepG2U2AF2
SEBTRCENSG00000166167.13chr10+103290993103291090103285769103285956103292051103292189-0.149000.012910.09934excludedK562AQR
SEBTRCENSG00000166167.13chr10+103221737103221815103113863103113985103239124103239214-0.256000.000340.00485excludedK562AQR
SEBTRCENSG00000166167.13chr10+103290993103291090103285769103285956103292051103292189-0.255000.000690.01250excludedK562PUS1
SEBTRCENSG00000166167.13chr10+103190101103190209103113825103113985103221737103221815-0.304000.001330.05564excludedHepG2SFPQ
SEBTRCENSG00000166167.13chr10+103221737103221815103113863103113985103239124103239214-0.197000.001310.03768excludedHepG2SF3A3
SEBTRCENSG00000166167.13chr10+103290993103291090103285769103285956103292051103292189-0.563000.000230.00573excludedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BTRC is not avaliable on ENCORE database.