ARID2

General Information

Gene Name       : ARID2
Gene ID             : ENSG00000189079.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ARID2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARID2ENSG00000189079.158.589.168.87ENCSR000AEF
HepG2ARID2ENSG00000189079.158.7310.349.54ENCSR985KAT
K562ARID2ENSG00000189079.1512.4013.4512.93ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARID2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARID2 RNA is bound by 28 proteins.  







eCLIP assay for ARID2 is not avaliable on ENCORE database.





28 proteins are bound to ARID2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr124630011246300172+3'-UTR4.343763.83835HepG2FUBP3
chr124629944946299531+3'-UTR5.2313558.57825K562PUM2
chr124629964346299685+3'-UTR5.3718318.89367K562PUM2
chr124629984146299912+3'-UTR3.369993.07984HepG2FUBP3
chr124629957746299640+3'-UTR5.6999330.90311K562PUM2
chr124629975346299785+3'-UTR3.8249212.28296K562PUM2
chr124630123846301307+3'-UTR6.320816.06289K562PUM2
chr124612361846123717+5'-UTR,CDS,intron-Proximal3.085633.78281HepG2SRSF1
chr124612499746125107+5'-UTR,CDS,intron-Proximal4.957767.92891HepG2GRWD1
chr124612497946125036+5'-UTR,CDS,intron-Proximal3.492354.17944K562BUD13
chr124612363546123718+5'-UTR,CDS,intron-Proximal3.416166.82013HepG2PPIG
chr124612499946125081+5'-UTR,CDS,intron-Proximal3.321405.39086K562UCHL5
chr124612388346123918+5'-UTR,CDS4.202324.07072K562UCHL5
chr124612388446123917+5'-UTR,CDS3.190924.14618K562ZNF622
chr124612504646125101+5'-UTR,CDS,intron-Proximal3.165308.02162HepG2BCLAF1
chr124620528346205323+5'-UTR,CDS3.009633.55138K562ZNF622
chr124624605146246111+5'-UTR,CDS3.865126.25299K562ZNF622
chr124624607146246121+5'-UTR,CDS4.054106.23296HepG2BCLAF1
chr124612378046123898+5'-UTR,CDS,intron-Proximal3.423567.53508HepG2BUD13
chr124620520546205247+5'-UTR,CDS3.531833.36945K562ZNF622
chr124624405646244127+CDS3.853389.42776K562ZNF622
chr124624439446244462+CDS3.239873.84724HepG2IGF2BP1
chr124621520246215260+CDS,intron-Proximal3.813478.25234K562ZNF622
chr124628581846285852+CDS4.570615.03746HepG2BCLAF1
chr124623052546230559+CDS3.393415.35144K562ZNF622
chr124624577946245844+CDS5.509338.75808HepG2BCLAF1
chr124624405146244113+CDS3.306633.34822K562RBM15
chr124623138246231465+CDS3.3182310.93851HepG2BCLAF1
chr124628586746285878+CDS3.800623.87469HepG2BCLAF1
chr124624059646240694+CDS,intron-Proximal4.7812110.03191K562SF3B4
chr124623134046231444+CDS3.338296.73886K562ZNF622
chr124621521546215293+CDS,intron-Proximal4.035516.65114HepG2PRPF8
chr124623128646231316+CDS3.741304.93978HepG2BCLAF1
chr124628729946287373+CDS,intron-Proximal3.450553.98203HepG2PRPF8
chr124624384946243892+CDS4.002193.73331K562RBM15
chr124624336646243445+CDS4.060029.09836HepG2BCLAF1
chr124624598346246057+CDS3.767033.04123K562LIN28B
chr124624578646245841+CDS4.118989.36792K562ZNF622
chr124624482146244858+CDS4.136974.20872K562IGF2BP1
chr124624336446243470+CDS3.026266.89313K562ZNF622
chr124628720046287242+CDS,intron-Proximal3.259394.26492HepG2BCLAF1
chr124624261746242715+CDS,intron-Proximal3.817306.81385HepG2BCLAF1
chr124624501446245070+CDS4.820096.23323K562UCHL5
chr124624406746244143+CDS3.137555.02145HepG2HLTF
chr124621153346211667+CDS3.678045.11891HepG2GRWD1
chr124624446246244522+CDS4.601274.43679K562IGF2BP1
chr124623312946233206+CDS,intron-Proximal3.388457.66871HepG2BCLAF1
chr124623131646231382+CDS4.8801818.70260HepG2BCLAF1
chr124623037446230418+CDS4.703955.24929K562ZNF622
chr124624399146244088+CDS3.723145.68440K562IGF2BP1
chr124624537246245464+CDS3.7948610.14758K562ZNF622
chr124621153646211615+CDS3.691536.97808HepG2BCLAF1
chr124623055646230604+CDS3.416556.60490HepG2BCLAF1
chr124627174446271790+intron-Distal3.088733.35050HepG2SUGP2
chr124613707546137146+intron-Distal4.779346.97375HepG2ILF3
chr124618624146186320+intron-Distal3.268505.96041K562KHSRP
chr124618962346189651+intron-Distal3.603624.48652HepG2PTBP1
chr124625554346255630+intron-Distal3.988494.25105HepG2HNRNPC
chr124622757846227634+intron-Distal3.809023.16028HepG2SUGP2
chr124618954746189655+intron-Distal6.1145614.07413K562PTBP1
chr124627250546272608+intron-Distal4.689933.60235HepG2HNRNPM
chr124613764146137699+intron-Distal5.079059.81815K562KHSRP
chr124617284446172961+intron-Distal3.440586.18396K562KHSRP
chr124623399046234047+intron-Distal3.034213.02891HepG2HNRNPL
chr124622904446229166+intron-Distal4.233064.96658K562KHSRP
chr124613758446137641+intron-Distal3.733066.25598K562KHSRP
chr124614828646148390+intron-Distal3.343324.75362K562PTBP1
chr124622210346222222+intron-Distal4.663366.73684K562KHSRP
chr124612921146129289+intron-Distal4.309216.26655K562EIF4G2
chr124622342146223502+intron-Distal5.299518.90415K562KHSRP
chr124618317546183304+intron-Distal3.986177.69621K562KHSRP
chr124612592046125974+intron-Distal3.499783.68839K562KHSRP
chr124623960046239710+intron-Distal,intron-Proximal4.673746.51328K562KHSRP
chr124613196946132075+intron-Distal3.446816.22064HepG2QKI
chr124626069746260791+intron-Distal4.121494.26925HepG2KHSRP
chr124624704646247126+intron-Distal4.497534.26925HepG2KHSRP
chr124615676346156789+intron-Distal3.455377.01633K562KHSRP
chr124624701846247146+intron-Distal3.9145511.44618K562KHSRP
chr124616958346169722+intron-Distal3.023436.87129K562KHSRP
chr124619673746196807+intron-Distal3.562393.89405HepG2PTBP1
chr124624724346247295+intron-Distal3.949984.78196HepG2PTBP1
chr124626252646262611+intron-Distal4.672844.85866HepG2QKI
chr124624043046240573+intron-Distal,intron-Proximal3.202914.14287K562KHSRP
chr124626876146268883+intron-Distal3.366215.59320HepG2SUGP2
chr124622882246228914+intron-Distal4.967286.40067K562PTBP1
chr124627200246272054+intron-Distal3.399124.33009HepG2SUGP2
chr124624724646247318+intron-Distal4.622804.90095K562PTBP1
chr124619672146196801+intron-Distal3.830323.76275K562PTBP1
chr124618596246186029+intron-Distal3.838823.02234K562KHSRP
chr124618956846189623+intron-Distal4.507309.21479HepG2PTBP1
chr124612590446125920+intron-Distal4.123363.24603K562KHSRP
chr124615672446156763+intron-Distal4.762517.39957K562KHSRP
chr124627256846272628+intron-Distal3.444224.33009HepG2SUGP2
chr124618411646184187+intron-Distal4.070523.45805K562KHSRP
chr124627280246272831+intron-Distal3.829813.04224HepG2SUGP2
chr124612617046126224+intron-Distal3.982413.60235HepG2HNRNPM
chr124612921846129302+intron-Distal4.889616.96521K562TARDBP
chr124627180646271879+intron-Distal4.582985.04879HepG2SUGP2
chr124622540246225503+intron-Distal3.182273.35377HepG2QKI
chr124615839546158531+intron-Distal3.251804.35650K562KHSRP
chr124618425446184345+intron-Distal3.463256.39618K562KHSRP
chr124618499746185073+intron-Distal4.368703.91772K562TARDBP
chr124614309246143127+intron-Distal3.091593.23296HepG2SUGP2
chr124628985146289974+intron-Distal3.105453.94756K562SAFB
chr124615678946156848+intron-Distal3.281258.93789K562KHSRP
chr124617392946174012+intron-Distal4.073805.42334HepG2QKI
chr124623951046239600+intron-Distal3.208765.36888K562KHSRP
chr124613191446132045+intron-Distal4.781256.80456K562KHSRP
chr124615666046156724+intron-Distal4.623366.94732K562KHSRP
chr124613194046132018+intron-Distal3.356453.78824HepG2KHSRP
chr124623975846239830+intron-Distal,intron-Proximal4.516614.20763HepG2U2AF2
chr124615631146156366+intron-Distal3.025973.23296HepG2SUGP2
chr124622185346222033+intron-Distal4.048223.98095HepG2HNRNPL
chr124619852046198619+intron-Distal4.426329.44715HepG2QKI
chr124614345746143508+intron-Distal3.346023.69184HepG2SUGP2
chr124627201146272067+intron-Distal4.093613.60235HepG2HNRNPM
chr124622879546228920+intron-Distal3.953846.77443HepG2PTBP1
chr124618610746186203+intron-Distal4.753856.27552K562KHSRP
chr124612394546124011+intron-Proximal4.258624.73785K562TIA1
chr124612371446123780+intron-Proximal3.496714.86518HepG2BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARID2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARID2 is not available on ENCORE database.

  • 82 RBPs can affect the levels of ARID2.  








The Knockdown/knockout RNA-Seq assay for ARID2 is not available on ENCORE database.





82 RBPs can affect the gene expression of ARID2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARID2ENSG00000189079.11651.488301288.68160-0.9841011.3239010.31780HepG2AKAP1
ARID2ENSG00000189079.11517.78300842.98460-0.703205.625504.27130HepG2BCCIP
ARID2ENSG00000189079.111089.496801359.58070-0.319503.001902.20060HepG2CALR
ARID2ENSG00000189079.11631.795501013.03440-0.681206.757705.58280HepG2CIRBP
ARID2ENSG00000189079.11843.952201064.69680-0.335202.620201.63120HepG2YBX3
ARID2ENSG00000189079.111039.875201217.83970-0.227902.358201.66590HepG2DAZAP1
ARID2ENSG00000189079.11825.65050965.61320-0.225902.032901.30820HepG2DDX19B
ARID2ENSG00000189079.11868.678901066.15470-0.295502.579401.46220HepG2DDX1
ARID2ENSG00000189079.11539.22320939.67100-0.8013010.144708.93540HepG2DDX21
ARID2ENSG00000189079.111208.454201592.66660-0.398303.563702.09630HepG2DDX47
ARID2ENSG00000189079.11466.81800828.83890-0.828207.471706.27240HepG2DDX55
ARID2ENSG00000189079.111092.924101517.02690-0.473104.448603.18040HepG2DDX5
ARID2ENSG00000189079.11757.11170998.88310-0.399804.446803.62540HepG2DKC1
ARID2ENSG00000189079.11841.171201045.41340-0.313602.886302.17120HepG2DNAJC21
ARID2ENSG00000189079.11781.425301036.23890-0.407205.816304.92270HepG2DNAJC2
ARID2ENSG00000189079.11628.304001019.41020-0.698206.742705.84360HepG2EIF2S1
ARID2ENSG00000189079.11779.825001126.56410-0.530703.962803.20200HepG2EIF4A3
ARID2ENSG00000189079.111484.666801096.875900.436602.474401.82220HepG2EIF4B
ARID2ENSG00000189079.111533.682301803.72910-0.234002.388101.82190HepG2ETF1
ARID2ENSG00000189079.11995.74200709.075600.489704.441203.45920HepG2FUBP3
ARID2ENSG00000189079.111239.078401696.48220-0.453303.477002.76540HepG2GPKOW
ARID2ENSG00000189079.11795.892501055.42930-0.407203.385902.67980HepG2HNRNPA1
ARID2ENSG00000189079.11912.763301119.22090-0.294202.748301.81590HepG2HNRNPA2B1
ARID2ENSG00000189079.11950.149301109.36430-0.223502.264101.64610HepG2HNRNPL
ARID2ENSG00000189079.11975.748801618.97980-0.730508.983807.92090HepG2HNRNPLL
ARID2ENSG00000189079.11970.329601166.22580-0.265302.642202.04920HepG2HNRNPU
ARID2ENSG00000189079.11733.606101071.79260-0.546904.774303.90930HepG2IGF2BP2
ARID2ENSG00000189079.11905.748701191.25780-0.395306.077905.03360HepG2ILF2
ARID2ENSG00000189079.111477.398902160.24420-0.548104.383203.33130HepG2LARP4
ARID2ENSG00000189079.11633.106301143.42710-0.852808.882407.80440HepG2MATR3
ARID2ENSG00000189079.111099.796501339.89910-0.284902.056101.35300HepG2MSI2
ARID2ENSG00000189079.11533.45020951.48360-0.834805.349704.08520HepG2PABPC1
ARID2ENSG00000189079.11799.131101042.27410-0.383202.465201.77990HepG2PABPC4
ARID2ENSG00000189079.11820.21750983.66020-0.262202.384801.81240HepG2PCBP1
ARID2ENSG00000189079.11817.864101040.17690-0.346903.399302.58950HepG2PPIL4
ARID2ENSG00000189079.11855.374101152.76090-0.430502.598702.01860HepG2PUF60
ARID2ENSG00000189079.11744.109301063.43930-0.515208.092507.13200HepG2PUS1
ARID2ENSG00000189079.111249.583201507.58370-0.270802.673602.16200HepG2RBM22
ARID2ENSG00000189079.111290.70470983.813600.391603.560602.80290HepG2RBM25
ARID2ENSG00000189079.11933.224301197.64190-0.359902.901002.20360HepG2RPLP0
ARID2ENSG00000189079.11749.082701045.25890-0.480702.846002.03520HepG2RPS3A
ARID2ENSG00000189079.11731.518001038.56450-0.505607.685506.69160HepG2SAFB2
ARID2ENSG00000189079.111006.136501211.12290-0.267503.171802.49090HepG2SMN1
ARID2ENSG00000189079.111487.564901702.76020-0.194901.984301.53850HepG2SRFBP1
ARID2ENSG00000189079.111397.010401087.704700.361004.584004.01360HepG2SRSF1
ARID2ENSG00000189079.112409.830701724.214800.482903.583102.43010HepG2SRSF3
ARID2ENSG00000189079.11997.969601478.39890-0.5670010.9974010.10780HepG2SSB
ARID2ENSG00000189079.11634.16190909.22120-0.519803.360402.13320HepG2STIP1
ARID2ENSG00000189079.11902.231701117.91290-0.309202.323401.45680HepG2SUPT6H
ARID2ENSG00000189079.11543.28990825.08130-0.602804.411103.58670HepG2SUPV3L1
ARID2ENSG00000189079.111177.27280977.621200.268002.172401.66470HepG2TAF15
ARID2ENSG00000189079.11672.277401133.13540-0.7532011.6534010.75300HepG2TIAL1
ARID2ENSG00000189079.11733.714501143.34090-0.6400011.6433010.60310HepG2TRIM56
ARID2ENSG00000189079.112155.785901416.181100.606107.205306.19820HepG2U2AF1
ARID2ENSG00000189079.11918.093001192.04680-0.376702.254401.50370HepG2UBE2L3
ARID2ENSG00000189079.11334.01850487.39070-0.545203.523202.67070HepG2UCHL5
ARID2ENSG00000189079.11412.85980755.48240-0.871706.487304.90420HepG2UPF2
ARID2ENSG00000189079.11626.31800936.23460-0.580003.752502.47050HepG2XPO5
ARID2ENSG00000189079.11388.17520812.20250-1.0651012.7916011.25210HepG2XRN2
ARID2ENSG00000189079.111092.347201327.80860-0.281603.473502.73430HepG2ZC3H8
ARID2ENSG00000189079.111122.420401750.26910-0.6410018.0799016.98460HepG2ZNF622
ARID2ENSG00000189079.111723.099102126.56240-0.303504.003603.34370K562AGGF1
ARID2ENSG00000189079.111815.446902212.79320-0.285502.223001.63500K562AKAP8L
ARID2ENSG00000189079.112799.380101784.890000.649208.856307.90390K562AQR
ARID2ENSG00000189079.11943.167001214.30070-0.364503.966302.80190K562BCLAF1
ARID2ENSG00000189079.111971.896602541.33100-0.366004.231302.73280K562CCDC124
ARID2ENSG00000189079.11656.91550921.22760-0.487804.693903.26510K562CSTF2
ARID2ENSG00000189079.112025.304302381.07030-0.233502.304401.51570K562DKC1
ARID2ENSG00000189079.111476.708702340.46650-0.664404.216003.15230K562FIP1L1
ARID2ENSG00000189079.111598.578901168.642700.451903.774402.42930K562FKBP4
ARID2ENSG00000189079.111961.467201355.672500.532803.896603.02310K562G3BP2
ARID2ENSG00000189079.111574.873501960.31820-0.315902.722601.93430K562GPKOW
ARID2ENSG00000189079.111232.816302158.99500-0.8084014.5168012.75250K562GRSF1
ARID2ENSG00000189079.112731.432101628.330400.746203.566502.12430K562HNRNPA2B1
ARID2ENSG00000189079.111394.422301924.89780-0.465102.459001.58460K562HNRNPM
ARID2ENSG00000189079.111772.334503173.41320-0.840406.177905.00060K562HSPD1
ARID2ENSG00000189079.111163.213501525.52480-0.391203.966502.84680K562MATR3
ARID2ENSG00000189079.111410.701801913.48700-0.439804.799603.62630K562METAP2
ARID2ENSG00000189079.111770.859602051.65460-0.212303.171902.37660K562NSUN2
ARID2ENSG00000189079.111224.816001547.96410-0.337803.326402.44360K562POLR2G
ARID2ENSG00000189079.111418.745602656.64820-0.905007.365205.89200K562PPIG
ARID2ENSG00000189079.11884.328601207.56220-0.449402.878401.95240K562PSIP1
ARID2ENSG00000189079.11847.519501101.47990-0.378102.774201.78260K562RCC2
ARID2ENSG00000189079.111917.826201552.683700.304602.257301.51480K562SYNCRIP
ARID2ENSG00000189079.111138.458201421.33220-0.320202.808301.98360K562TIA1
ARID2ENSG00000189079.111784.830601313.588800.442203.351902.12260K562U2AF1
ARID2ENSG00000189079.112024.078801356.814400.576909.272507.79550K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARID2 is not available on ENCORE database.





8 RBPs can affect the splicing of ARID2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEARID2ENSG00000189079.11chr12+4629812446298181462874124628750446298716463018230.072000.004460.09620includedK562AKAP8L
A3SSARID2ENSG00000189079.11chr12+4625454546254732462545834625473246243818462466790.065000.013790.06962longerK562AQR
A5SSARID2ENSG00000189079.11chr12+462305234623077446230523462306064623110346231200-0.302000.000220.05051shorterK562HNRNPUL1
A5SSARID2ENSG00000189079.11chr12+462305234623077446230523462306064623110346231200-0.197000.000690.02844shorterK562PUS1
A5SSARID2ENSG00000189079.11chr12+462305234623077446230523462306064623110346231200-0.198000.000190.09444shorterK562ZC3H8
A5SSARID2ENSG00000189079.11chr12+462305234623077446230523462306064623110346231200-0.186000.001230.09350shorterK562UTP18
RIARID2ENSG00000189079.11chr12+4623037146230606462303714623043846230523462306060.143000.000000.00002includedK562PUS1
RIARID2ENSG00000189079.11chr12+4623037146230606462303714623043846230523462306060.067000.009300.08478includedK562AGGF1
RIARID2ENSG00000189079.11chr12+4623037146230606462303714623043846230523462306060.064000.012000.08945includedK562AKAP8L
RIARID2ENSG00000189079.11chr12+4623037146230606462303714623043846230523462306060.077000.003610.03693includedK562RBM15
RIARID2ENSG00000189079.11chr12+4623037146230606462303714623043846230523462306060.058000.008790.08029includedK562UTP18
MXEARID2ENSG00000189079.11chr12+4623037146230438462305234623060646215202462152704623110346231200-0.232000.002630.042812includedK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARID2 is not avaliable on ENCORE database.