ZNF708

General Information

Gene Name       : ZNF708
Gene ID             : ENSG00000182141.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ZNF708)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF708ENSG00000182141.109.397.988.69ENCSR000AEF
HepG2ZNF708ENSG00000182141.101.824.623.22ENCSR985KAT
K562ZNF708ENSG00000182141.104.915.525.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF708 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF708 RNA is bound by 7 proteins.  







eCLIP assay for ZNF708 is not avaliable on ENCORE database.





7 proteins are bound to ZNF708 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr192147596521476019-3'-UTR,intron-Distal4.179783.85494HepG2HLTF
chr192147738221477514-3'-UTR,CDS,intron-Distal4.012876.22576HepG2BCLAF1
chr192148170821481807-intron-Distal3.991725.32884K562KHSRP
chr192149145221491561-intron-Distal3.733065.95946K562KHSRP
chr192148072821480838-intron-Distal3.740555.03298HepG2HNRNPL
chr192148157321481623-intron-Distal3.666843.02234K562KHSRP
chr192148563121485744-intron-Distal4.275063.89294K562KHSRP
chr192148272421482820-intron-Distal3.466224.10408K562KHSRP
chr192150434921504412-intron-Distal4.478053.91475K562PTBP1
chr192148164621481708-intron-Distal4.784946.07567K562KHSRP
chr192148049421480579-intron-Distal3.752883.16095HepG2U2AF2
chr192150436321504417-intron-Distal5.369397.38423HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF708 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF708 is not available on ENCORE database.

  • 72 RBPs can affect the levels of ZNF708.  








The Knockdown/knockout RNA-Seq assay for ZNF708 is not available on ENCORE database.





72 RBPs can affect the gene expression of ZNF708 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF708ENSG00000182141.5324.07280204.520500.664002.291201.80240HepG2AKAP1
ZNF708ENSG00000182141.5386.77250213.963400.854007.218506.05060HepG2CALR
ZNF708ENSG00000182141.5254.38740160.784400.661803.147302.32450HepG2CIRBP
ZNF708ENSG00000182141.5207.68900122.335400.763503.104101.63550HepG2CSTF2T
ZNF708ENSG00000182141.5202.87340131.891700.621102.575701.91780HepG2DDX21
ZNF708ENSG00000182141.5201.98870129.028000.646502.815001.89190HepG2DDX24
ZNF708ENSG00000182141.5291.74620195.950600.574102.581001.97480HepG2DDX3X
ZNF708ENSG00000182141.5260.40430149.510000.800403.662702.78670HepG2DDX55
ZNF708ENSG00000182141.5285.47070174.453000.710403.142502.42750HepG2DKC1
ZNF708ENSG00000182141.5114.84550169.07050-0.557902.237101.59890HepG2DNAJC21
ZNF708ENSG00000182141.5240.50170142.537900.754603.757202.71350HepG2EIF3D
ZNF708ENSG00000182141.5281.15720178.868100.652402.792402.15030HepG2EIF4A3
ZNF708ENSG00000182141.5303.51040174.076700.801903.792102.99220HepG2EIF4B
ZNF708ENSG00000182141.5291.94750195.061400.581703.212502.03630HepG2ESF1
ZNF708ENSG00000182141.5424.30970273.477000.633603.558502.88990HepG2ETF1
ZNF708ENSG00000182141.5139.7025091.366700.612502.014201.33480HepG2FUBP3
ZNF708ENSG00000182141.5237.10790167.364100.502502.001401.43200HepG2G3BP1
ZNF708ENSG00000182141.5253.86970178.544800.507702.225101.37790HepG2HNRNPA2B1
ZNF708ENSG00000182141.5136.30180188.60850-0.468601.959101.43960HepG2HNRNPU
ZNF708ENSG00000182141.5414.43480159.582001.376702.289501.40160HepG2IGF2BP3
ZNF708ENSG00000182141.5228.89660142.719000.681403.215501.37290HepG2LSM11
ZNF708ENSG00000182141.5287.83520184.088700.644703.639402.71290HepG2MSI2
ZNF708ENSG00000182141.5207.54240128.607500.690303.456701.87560HepG2NIP7
ZNF708ENSG00000182141.5230.58440137.279600.748102.458501.43350HepG2NONO
ZNF708ENSG00000182141.5251.12990177.403300.501302.577601.82880HepG2PRPF4
ZNF708ENSG00000182141.5178.03740115.345300.626102.188001.46680HepG2PRPF8
ZNF708ENSG00000182141.5311.45740195.074500.674903.796503.01600HepG2PUM2
ZNF708ENSG00000182141.5252.98930175.712100.525802.305301.72550HepG2QKI
ZNF708ENSG00000182141.5403.20970180.874001.156403.765402.94770HepG2RAVER1
ZNF708ENSG00000182141.5473.92510228.582101.0518012.6988011.75100HepG2RBM22
ZNF708ENSG00000182141.5284.56230159.456700.835505.295204.39110HepG2RBM25
ZNF708ENSG00000182141.5174.00150114.101400.608702.010301.33040HepG2RRP9
ZNF708ENSG00000182141.5606.96700297.028401.030909.089607.81290HepG2SF3A3
ZNF708ENSG00000182141.5409.21680258.185700.664405.971305.31280HepG2SRFBP1
ZNF708ENSG00000182141.5334.16680176.294100.922507.432906.74510HepG2SRSF1
ZNF708ENSG00000182141.5255.92130181.551000.495202.210901.64430HepG2SRSF5
ZNF708ENSG00000182141.5354.48500224.184900.660905.448104.77610HepG2SSB
ZNF708ENSG00000182141.5239.66030148.837900.687102.692502.02380HepG2SUPV3L1
ZNF708ENSG00000182141.5262.25350158.426500.727004.279003.60510HepG2TAF15
ZNF708ENSG00000182141.5107.85700184.90730-0.777704.260003.58960HepG2TRIM56
ZNF708ENSG00000182141.5489.62530194.513301.3317014.6887013.20340HepG2U2AF1
ZNF708ENSG00000182141.5313.38760190.104000.721102.895302.04050HepG2UBE2L3
ZNF708ENSG00000182141.5307.78010198.909100.629702.858701.78440HepG2XRCC6
ZNF708ENSG00000182141.5359.47320175.078501.037808.732207.65030HepG2ZC3H8
ZNF708ENSG00000182141.5303.21060179.689200.754704.116202.63920K562AARS
ZNF708ENSG00000182141.5274.37450416.97910-0.603804.708704.00220K562AGGF1
ZNF708ENSG00000182141.5233.28020433.88260-0.895207.913006.75420K562AKAP8L
ZNF708ENSG00000182141.5644.24180463.725900.474204.716603.89770K562DDX47
ZNF708ENSG00000182141.5192.86550106.427900.857604.167902.49260K562DNAJC21
ZNF708ENSG00000182141.5225.32340100.671301.162205.000803.60670K562EIF3A
ZNF708ENSG00000182141.5282.18720175.495700.685102.820201.99140K562EIF4A3
ZNF708ENSG00000182141.5192.97650342.21850-0.826505.908604.63550K562FIP1L1
ZNF708ENSG00000182141.5258.49640182.506800.502102.462401.88480K562FXR1
ZNF708ENSG00000182141.5437.88410209.937201.060508.391307.01980K562G3BP2
ZNF708ENSG00000182141.5208.25250341.81080-0.714902.440601.31740K562HNRNPA2B1
ZNF708ENSG00000182141.5336.89150196.656000.776505.262904.46410K562HNRNPC
ZNF708ENSG00000182141.5347.32550460.46840-0.406802.395301.63600K562KIF1C
ZNF708ENSG00000182141.5344.72650237.085400.539902.289701.44870K562KRR1
ZNF708ENSG00000182141.5193.57230361.56520-0.901405.175803.83660K562NAA15
ZNF708ENSG00000182141.5113.51340299.09620-1.397706.598604.87220K562PABPN1
ZNF708ENSG00000182141.5391.71890251.280000.640403.680902.71900K562PCBP3
ZNF708ENSG00000182141.5318.63150192.744000.725105.140704.04770K562POLR2G
ZNF708ENSG00000182141.5220.06910388.49480-0.819906.434805.09430K562PPIG
ZNF708ENSG00000182141.5201.20780269.45660-0.421402.025401.44040K562PTBP1
ZNF708ENSG00000182141.5728.46880487.134100.580402.810201.98710K562PUF60
ZNF708ENSG00000182141.5789.86560518.080500.608306.740505.01280K562PUM1
ZNF708ENSG00000182141.5667.69140507.680600.395203.290702.24240K562PUM2
ZNF708ENSG00000182141.5156.40310430.31400-1.4601016.1260014.85760K562PUS1
ZNF708ENSG00000182141.5228.85270419.25840-0.873408.221407.22890K562RBM15
ZNF708ENSG00000182141.5137.25530235.96820-0.781704.877502.78060K562RPS10
ZNF708ENSG00000182141.5150.64240273.59360-0.860902.420701.32640K562SF1
ZNF708ENSG00000182141.5465.60920314.839600.564404.602403.57490K562SF3A3
ZNF708ENSG00000182141.5143.80320314.10830-1.127204.655002.93560K562SNRNP200
ZNF708ENSG00000182141.5174.34010264.14810-0.599403.067602.32610K562SRSF1
ZNF708ENSG00000182141.5357.21060193.322100.885707.674606.29760K562SYNCRIP
ZNF708ENSG00000182141.580.50170169.59110-1.075004.937803.65450K562TIAL1
ZNF708ENSG00000182141.5396.13310289.467700.452502.333301.52850K562WDR3
ZNF708ENSG00000182141.5384.55600301.024100.353202.185401.42650K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF708 is not available on ENCORE database.





7 RBPs can affect the splicing of ZNF708 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF708ENSG00000182141.5chr19-2149330221493429214920472149214321512011215122120.702000.000470.08938includedHepG2DKC1
SEZNF708ENSG00000182141.5chr19-214933022149342921492047214921432151201121512212-0.425000.000380.08417excludedK562WDR43
SEZNF708ENSG00000182141.5chr19-2149330221493429214920472149214321512011215122120.546000.001180.01616includedHepG2U2AF2
SEZNF708ENSG00000182141.5chr19-2149330221493429214920472149214321512011215122120.697000.000020.00263includedHepG2SFPQ
SEZNF708ENSG00000182141.5chr19-214933022149342921492047214921432151201121512212-0.409000.000190.03778excludedK562UPF1
SEZNF708ENSG00000182141.5chr19-214896192148974321477344214775412149204721492143-0.286000.000620.02792excludedK562SF3B1
SEZNF708ENSG00000182141.5chr19-2148961921489743214773442147754121492047214921430.824000.000470.02143includedHepG2HNRNPC
SEZNF708ENSG00000182141.5chr19-2149330221493429214920472149214321512011215122120.841000.000000.00000includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF708 is not avaliable on ENCORE database.