UBE2W

General Information

Gene Name       : UBE2W
Gene ID             : ENSG00000104343.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: UBE2W)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878UBE2WENSG00000104343.197.687.207.44ENCSR000AEF
HepG2UBE2WENSG00000104343.194.628.626.62ENCSR985KAT
K562UBE2WENSG00000104343.194.364.234.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for UBE2W is not avaliable on ENCORE database.



Proteins bound to RNA
  • UBE2W RNA is bound by 13 proteins.  







eCLIP assay for UBE2W is not avaliable on ENCORE database.





13 proteins are bound to UBE2W RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr87470482874704933-3'-UTR,intron-Distal3.214555.83938K562KHSRP
chr87470259074702695-3'-UTR,intron-Distal4.778047.91159K562KHSRP
chr87470629374706385-3'-UTR,CDS,intron-Distal3.370453.42396HepG2U2AF2
chr87479097474791075-5'-UTR,CDS,intron-Distal,intron-Proximal3.665913.64037HepG2NCBP2
chr87479099774791061-5'-UTR,CDS,intron-Distal,intron-Proximal3.933745.64484HepG2PRPF8
chr87479060674790696-intron-Distal4.535333.31384K562XRN2
chr87478963974789729-intron-Distal4.243305.16181K562PTBP1
chr87476421374764314-intron-Distal3.208426.22789HepG2PCBP2
chr87479062674790714-intron-Distal3.083534.65543HepG2NKRF
chr87470703174707095-intron-Distal4.040764.02766HepG2HNRNPC
chr87479080974790913-intron-Distal4.052377.23771HepG2CSTF2T
chr87478478474784858-intron-Distal3.101683.27276HepG2HNRNPL
chr87476194274762048-intron-Distal4.868884.38664K562QKI
chr87479065574790687-intron-Distal3.618505.14745HepG2XRN2
chr87470644274706497-intron-Distal3.566613.91876HepG2U2AF2
chr87479076174790913-intron-Distal4.660295.35385HepG2PRPF4
chr87479076474790801-intron-Distal5.017685.55769HepG2XRN2
chr87478968474789736-intron-Distal4.391083.09122HepG2PTBP1
chr87478973874789803-intron-Distal4.019575.16181K562PTBP1
chr87479074974790815-intron-Distal3.166227.68772HepG2NKRF
chr87479059974790655-intron-Distal4.040225.28966HepG2XRN2
chr87479082374790886-intron-Distal5.448938.40490HepG2NKRF
chr87479080174790949-intron-Distal4.093054.22598K562CSTF2T
chr87476421074764294-intron-Distal4.622804.90095K562PTBP1
chr87470651674706576-intron-Distal4.140953.92684K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for UBE2W is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for UBE2W is not available on ENCORE database.

  • 80 RBPs can affect the levels of UBE2W.  








The Knockdown/knockout RNA-Seq assay for UBE2W is not available on ENCORE database.





80 RBPs can affect the gene expression of UBE2W :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
UBE2WENSG00000104343.15404.21910263.132500.619203.945502.68250HepG2AATF
UBE2WENSG00000104343.15754.59960412.555700.8710015.6135014.41900HepG2ACO1
UBE2WENSG00000104343.151544.59030758.457601.0260012.8914011.83170HepG2AKAP1
UBE2WENSG00000104343.15571.14920377.683900.596603.989802.74360HepG2AKAP8
UBE2WENSG00000104343.15749.21390414.557900.853706.033304.94000HepG2AKAP8L
UBE2WENSG00000104343.15991.69200627.588800.660006.179905.02840HepG2ASCC1
UBE2WENSG00000104343.151098.31090654.428200.7469014.0193012.68510HepG2AUH
UBE2WENSG00000104343.15534.69450313.529600.770006.827405.93540HepG2BOP1
UBE2WENSG00000104343.15662.00350345.976700.936106.991305.83620HepG2CALR
UBE2WENSG00000104343.15294.95120577.77440-0.970002.367001.47260HepG2CCAR1
UBE2WENSG00000104343.151072.70840646.632400.730104.710003.70720HepG2CNOT7
UBE2WENSG00000104343.15866.71010537.231700.689909.861308.78980HepG2CELF1
UBE2WENSG00000104343.15482.20990371.237800.377202.382701.31210HepG2DDX1
UBE2WENSG00000104343.15487.61380290.453800.747306.159605.19490HepG2DDX21
UBE2WENSG00000104343.15402.73450284.116300.503202.988702.03660HepG2DDX24
UBE2WENSG00000104343.151681.32430726.606801.2103020.4664018.93180HepG2DDX3X
UBE2WENSG00000104343.15622.84850326.862800.930105.510804.14590HepG2DDX59
UBE2WENSG00000104343.15478.82100341.896900.485802.951601.91050HepG2DDX5
UBE2WENSG00000104343.15519.70500394.723900.396701.953801.36960HepG2DKC1
UBE2WENSG00000104343.15284.02030360.78250-0.345102.090401.50870HepG2DNAJC2
UBE2WENSG00000104343.15471.64680267.368300.818803.278002.06270HepG2AGO1
UBE2WENSG00000104343.15352.41660600.03450-0.767805.849605.00520HepG2EIF2S1
UBE2WENSG00000104343.15497.73240663.17840-0.414002.064401.50980HepG2EIF4A3
UBE2WENSG00000104343.151140.80720645.564100.821305.689604.72550HepG2EIF4B
UBE2WENSG00000104343.15408.66900545.94290-0.417802.619201.82550HepG2EIF4G2
UBE2WENSG00000104343.15971.10420751.335600.370103.702503.02450HepG2ETF1
UBE2WENSG00000104343.15712.06080403.208900.820402.128101.39700HepG2EWSR1
UBE2WENSG00000104343.15582.46430397.345200.551702.303001.59730HepG2FIP1L1
UBE2WENSG00000104343.15305.57170668.90810-1.130309.636408.41520HepG2FXR1
UBE2WENSG00000104343.15564.35230393.919200.518602.754701.78050HepG2HDGF
UBE2WENSG00000104343.15308.47200408.78070-0.406202.001801.40130HepG2HNRNPC
UBE2WENSG00000104343.15357.86300628.17620-0.811807.028705.95190HepG2HNRNPK
UBE2WENSG00000104343.15441.37880311.390900.503202.799802.16730HepG2HNRNPLL
UBE2WENSG00000104343.15472.35760630.88760-0.417502.366701.73600HepG2IGF2BP2
UBE2WENSG00000104343.15410.55900672.92020-0.712803.874203.13890HepG2MATR3
UBE2WENSG00000104343.15509.99580321.706900.664605.735304.60980HepG2MSI2
UBE2WENSG00000104343.151073.43920688.799100.640005.731004.83460HepG2NCBP2
UBE2WENSG00000104343.15852.23220590.928100.528202.432901.61130HepG2PABPC1
UBE2WENSG00000104343.15314.42000401.96060-0.354402.103201.35680HepG2PARN
UBE2WENSG00000104343.15691.23460429.814900.685404.262102.98990HepG2PCBP2
UBE2WENSG00000104343.15201.24250274.99950-0.450502.338801.62090HepG2PRPF4
UBE2WENSG00000104343.15834.48030613.946200.442703.176102.59780HepG2PTBP1
UBE2WENSG00000104343.15725.65010546.839200.408102.788902.19020HepG2PUF60
UBE2WENSG00000104343.15398.62910580.46810-0.542206.535605.70520HepG2PUM1
UBE2WENSG00000104343.15580.49390420.226000.466004.460503.71440HepG2PUS1
UBE2WENSG00000104343.15928.25890664.937700.481204.872604.07920HepG2QKI
UBE2WENSG00000104343.151263.63820627.985001.0087022.9355021.73520HepG2RBM22
UBE2WENSG00000104343.15966.22610603.466600.679008.163207.05480HepG2RBM25
UBE2WENSG00000104343.15598.78380413.379600.534504.391603.56100HepG2RPLP0
UBE2WENSG00000104343.15562.66580411.799400.450202.993201.87440HepG2RPS5
UBE2WENSG00000104343.15562.79680321.959900.805606.399405.25930HepG2RRP9
UBE2WENSG00000104343.15287.02920361.63690-0.333301.867101.32080HepG2SAFB2
UBE2WENSG00000104343.15165.47010385.38570-1.219703.629302.03170HepG2SF1
UBE2WENSG00000104343.15833.57560406.823601.034806.253105.21350HepG2SF3A3
UBE2WENSG00000104343.15415.43620308.220200.430602.248201.60920HepG2SF3B1
UBE2WENSG00000104343.15429.29050524.28050-0.288402.075401.45190HepG2SLBP
UBE2WENSG00000104343.15959.58200342.947301.484306.320905.12770HepG2SNRNP70
UBE2WENSG00000104343.151738.15220709.299001.2930052.3990050.93560HepG2SRFBP1
UBE2WENSG00000104343.15790.18750667.193600.244001.722701.32480HepG2SRSF1
UBE2WENSG00000104343.15712.61220539.893100.400302.945602.30080HepG2SRSF5
UBE2WENSG00000104343.15718.30550542.792000.404103.999803.35960HepG2SRSF9
UBE2WENSG00000104343.15596.31320387.633400.621303.207601.90620HepG2SUB1
UBE2WENSG00000104343.15757.12630419.895100.850407.819306.77730HepG2SUPV3L1
UBE2WENSG00000104343.15424.27920303.488300.483302.711001.99270HepG2TARDBP
UBE2WENSG00000104343.15282.68860394.61760-0.481203.001702.48420HepG2TIAL1
UBE2WENSG00000104343.15284.34660413.33980-0.539702.446001.76030HepG2XRN2
UBE2WENSG00000104343.15379.96560271.383800.485403.551802.80560HepG2ZC3H8
UBE2WENSG00000104343.15556.95190396.800000.489005.038504.35510HepG2ZNF622
UBE2WENSG00000104343.15564.20120369.535200.610406.417505.60500K562AGGF1
UBE2WENSG00000104343.15558.53830406.090800.459802.519601.58960K562AKAP8
UBE2WENSG00000104343.15541.84820384.524900.494703.649602.89640K562AKAP8L
UBE2WENSG00000104343.15665.78490472.284300.495303.337202.70480K562AQR
UBE2WENSG00000104343.1552.5703092.20740-0.810602.437901.46060K562CCAR1
UBE2WENSG00000104343.15899.73420611.927000.556005.447604.07620K562CELF1
UBE2WENSG00000104343.15214.22300285.59990-0.414902.039101.34760K562EIF3G
UBE2WENSG00000104343.15134.70410208.12440-0.627702.082001.55430K562HNRNPC
UBE2WENSG00000104343.15579.02940408.053300.504803.691602.72000K562KIF1C
UBE2WENSG00000104343.15292.62790470.16210-0.684102.152801.34930K562MATR3
UBE2WENSG00000104343.15443.30460320.414400.468302.154001.39780K562NAA15
UBE2WENSG00000104343.15432.38420313.470300.463903.004701.72430K562NCBP2
UBE2WENSG00000104343.15306.85460202.578500.599003.069502.27900K562PRPF8
UBE2WENSG00000104343.15857.94760542.924900.660006.652805.38600K562PUF60
UBE2WENSG00000104343.15736.98340381.294800.9506010.549009.53500K562PUS1
UBE2WENSG00000104343.15512.47040371.554400.463803.619302.95410K562RBM15
UBE2WENSG00000104343.15109.44990170.25040-0.637402.458501.52850K562RCC2
UBE2WENSG00000104343.15496.84730281.765100.818203.123601.57580K562SUPT6H
UBE2WENSG00000104343.15512.99150350.966700.547503.349502.12100K562U2AF1
UBE2WENSG00000104343.15468.57810362.407700.370602.302901.57160K562U2AF2
UBE2WENSG00000104343.15505.90630277.215400.867803.571201.66570K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for UBE2W is not available on ENCORE database.





4 RBPs can affect the splicing of UBE2W :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEUBE2WENSG00000104343.15chr8-747373817473748474722708747228647474261574742752-0.338000.000000.00002excludedK562AQR
SEUBE2WENSG00000104343.15chr8-747373817473748474722708747228647474261574742707-0.147000.003830.05059excludedK562PUS1
SEUBE2WENSG00000104343.15chr8-747373817473748474722708747228647474261574742707-0.148000.002330.08678excludedHepG2SF3B4
SEUBE2WENSG00000104343.15chr8-747373817473748474722708747228647474261574742707-0.212000.000180.00702excludedK562RBM15
A3SSUBE2WENSG00000104343.15chr8-7473738174737578747373817473748474742615747427090.189000.000000.00000longerK562AQR
A3SSUBE2WENSG00000104343.15chr8-7474261574742752747426157474270774791042747910600.150000.000820.00581longerK562AQR
MXEUBE2WENSG00000104343.15chr8-74717885747179617472270874722864747028397470635074742615747427070.145000.003010.070591includedK562RBM15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for UBE2W is not avaliable on ENCORE database.