TP73-AS1

General Information

Gene Name       : TP73-AS1
Gene ID             : ENSG00000227372.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TP73-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TP73-AS1ENSG00000227372.122.974.553.76ENCSR000AEF
HepG2TP73-AS1ENSG00000227372.1215.977.9211.95ENCSR985KAT
K562TP73-AS1ENSG00000227372.1217.9913.1615.57ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TP73-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TP73-AS1 RNA is bound by 20 proteins.  







eCLIP assay for TP73-AS1 is not avaliable on ENCORE database.





20 proteins are bound to TP73-AS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr136528983653005-intron-Distal5.9388711.78880HepG2XPO5
chr136567833656953-intron-Distal,intron-Proximal3.643648.62339HepG2GRWD1
chr136625193662567-intron-Distal4.222854.15208K562RBM15
chr136556733655732-intron-Distal3.702263.05512HepG2PRPF4
chr136557513655846-intron-Distal3.622376.03664K562GTF2F1
chr136593673659451-intron-Distal,intron-Proximal3.430963.32039HepG2PPIG
chr136638163663884-intron-Distal5.116458.17272HepG2DDX3X
chr136547863654835-intron-Distal4.502193.81597K562RBM15
chr136548443654929-intron-Distal,intron-Proximal3.033763.39306HepG2GRWD1
chr136552073655265-intron-Distal3.325373.04831K562RBM15
chr136567693656796-intron-Distal,intron-Proximal4.7601411.83800K562AQR
chr136566933656747-intron-Distal,intron-Proximal3.107807.61554K562AQR
chr136624133662446-intron-Distal3.284143.04831K562RBM15
chr136636313663767-intron-Distal4.153706.15796HepG2DDX3X
chr136549903655035-intron-Distal,intron-Proximal3.944453.48187K562RBM15
chr136556853655727-intron-Distal4.605725.32760K562DHX30
chr136557883655891-intron-Distal3.588555.81177K562TBRG4
chr136536363653732-intron-Distal,intron-Proximal4.133843.50357HepG2QKI
chr136543873654448-intron-Distal,intron-Proximal4.162637.30031K562AQR
chr136544563654537-intron-Distal,intron-Proximal4.140044.14162K562RBFOX2
chr136567733656908-intron-Distal,intron-Proximal3.276485.85084K562RBM15
chr136568983656956-intron-Distal,intron-Proximal3.333795.87745K562BUD13
chr136621853662230-intron-Distal4.615796.19943K562RBM15
chr136557393655852-intron-Distal3.746714.27819HepG2EXOSC5
chr136567533656827-intron-Distal,intron-Proximal3.324074.79866HepG2PRPF8
chr136620983662149-intron-Distal,intron-Proximal4.325373.81597K562RBM15
chr136557113655844-intron-Distal3.268383.85730K562AKAP1
chr136623083662389-intron-Distal4.537219.04978K562RBM15
chr136567573656769-intron-Distal,intron-Proximal5.4447513.75908K562AQR
chr136565543656714-intron-Distal,intron-Proximal3.605714.72691K562TAF15
chr136557443655906-intron-Distal4.1153312.76501K562FUS
chr136547283654782-intron-Distal3.430876.68978K562DGCR8
chr136557023655893-intron-Distal3.378898.89344K562SAFB
chr136549693655046-intron-Distal,intron-Proximal4.466164.08604HepG2PPIG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TP73-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TP73-AS1 is not available on ENCORE database.

  • 74 RBPs can affect the levels of TP73-AS1.  








The Knockdown/knockout RNA-Seq assay for TP73-AS1 is not available on ENCORE database.





74 RBPs can affect the gene expression of TP73-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TP73-AS1ENSG00000227372.6561.13850758.84100-0.435404.870704.10660HepG2ACO1
TP73-AS1ENSG00000227372.6619.88590762.40190-0.298502.442301.71700HepG2AKAP8L
TP73-AS1ENSG00000227372.6286.26940492.33830-0.782305.944304.81560HepG2ASCC1
TP73-AS1ENSG00000227372.6814.91850972.36290-0.254802.130801.51460HepG2AUH
TP73-AS1ENSG00000227372.6261.69900419.93420-0.682305.209804.19190HepG2CALR
TP73-AS1ENSG00000227372.6522.37640758.67090-0.538407.271206.28780HepG2CKAP4
TP73-AS1ENSG00000227372.6696.51410866.57690-0.315202.680502.04580HepG2CELF1
TP73-AS1ENSG00000227372.6535.02110701.81680-0.391504.181303.18080HepG2DDX19B
TP73-AS1ENSG00000227372.6380.66310551.15990-0.534003.823203.03830HepG2DDX21
TP73-AS1ENSG00000227372.6397.43020569.97800-0.520203.194402.52860HepG2DDX3X
TP73-AS1ENSG00000227372.6591.78470726.00380-0.294902.280701.65570HepG2DKC1
TP73-AS1ENSG00000227372.6328.15650508.15690-0.630904.217203.10220HepG2EEF2
TP73-AS1ENSG00000227372.6255.58700412.48400-0.690504.087103.00290HepG2EIF3D
TP73-AS1ENSG00000227372.6686.16620520.119600.399602.119801.55720HepG2EIF4A3
TP73-AS1ENSG00000227372.6680.54970919.26050-0.433804.894503.83310HepG2EIF4G1
TP73-AS1ENSG00000227372.6520.90630880.59210-0.757406.921505.65870HepG2EIF4G2
TP73-AS1ENSG00000227372.6802.60980524.903500.612504.976604.06830HepG2FXR1
TP73-AS1ENSG00000227372.6651.76630856.33330-0.393803.949602.86430HepG2HNRNPA2B1
TP73-AS1ENSG00000227372.6778.65730493.142300.658905.898004.90740HepG2HNRNPK
TP73-AS1ENSG00000227372.6675.62620848.77780-0.329203.423502.68160HepG2HNRNPL
TP73-AS1ENSG00000227372.6736.47730497.786800.565003.351202.23600HepG2KHSRP
TP73-AS1ENSG00000227372.6848.94730613.675300.468102.650001.83730HepG2LARP4
TP73-AS1ENSG00000227372.6436.43390579.07550-0.408002.757601.95060HepG2MSI2
TP73-AS1ENSG00000227372.6284.19880442.26200-0.638002.822801.92350HepG2PABPC1
TP73-AS1ENSG00000227372.6351.00510551.28490-0.651303.659702.47500HepG2PCBP2
TP73-AS1ENSG00000227372.6250.58470396.84560-0.663304.246103.26880HepG2PRPF8
TP73-AS1ENSG00000227372.6499.55900881.99230-0.8201010.515409.45370HepG2PUF60
TP73-AS1ENSG00000227372.6664.29240936.27510-0.495107.222906.35810HepG2PUM1
TP73-AS1ENSG00000227372.6699.53690935.59040-0.419503.847203.05980HepG2PUM2
TP73-AS1ENSG00000227372.6616.29790772.92800-0.326703.051302.41200HepG2PUS1
TP73-AS1ENSG00000227372.6747.76200570.501700.390203.123202.46610HepG2QKI
TP73-AS1ENSG00000227372.6306.97570531.88800-0.793003.994903.15370HepG2RAVER1
TP73-AS1ENSG00000227372.6669.03180517.774200.369702.504001.85910HepG2RBM25
TP73-AS1ENSG00000227372.6743.15820546.028900.444604.404003.64960HepG2RECQL
TP73-AS1ENSG00000227372.6344.00470522.68550-0.603503.070802.07700HepG2RPS10
TP73-AS1ENSG00000227372.6286.10850401.39220-0.488502.899002.27220HepG2RPS19
TP73-AS1ENSG00000227372.6289.66040392.54820-0.438502.131601.43380HepG2RRP9
TP73-AS1ENSG00000227372.6284.45750402.81680-0.501903.010602.02770HepG2SERBP1
TP73-AS1ENSG00000227372.6673.41440548.434800.296102.123201.59510HepG2SF3B4
TP73-AS1ENSG00000227372.6783.914401053.91530-0.427005.752605.10360HepG2SRFBP1
TP73-AS1ENSG00000227372.6399.12660572.45380-0.520304.602204.03100HepG2SRSF1
TP73-AS1ENSG00000227372.6242.08520365.54560-0.594502.203401.32140HepG2SRSF3
TP73-AS1ENSG00000227372.6664.91260870.84050-0.389203.959003.23370HepG2SRSF5
TP73-AS1ENSG00000227372.6614.72150465.727300.400303.666303.05070HepG2SRSF9
TP73-AS1ENSG00000227372.6667.00130915.03600-0.456105.695605.01050HepG2SSB
TP73-AS1ENSG00000227372.6779.52420990.38420-0.345403.893503.17830HepG2SUCLG1
TP73-AS1ENSG00000227372.6322.82350512.25720-0.666104.620803.78020HepG2SUPV3L1
TP73-AS1ENSG00000227372.6739.15300514.562100.522405.489604.74590HepG2TAF15
TP73-AS1ENSG00000227372.6477.78330612.12860-0.357501.944601.40740HepG2U2AF1
TP73-AS1ENSG00000227372.6423.17980302.577500.483902.442301.72920HepG2UCHL5
TP73-AS1ENSG00000227372.6511.65660696.16050-0.444204.693003.82320HepG2UPF1
TP73-AS1ENSG00000227372.6469.38940672.11590-0.517905.326404.54030HepG2UTP3
TP73-AS1ENSG00000227372.6506.08590765.64360-0.597308.968208.12810HepG2ZNF622
TP73-AS1ENSG00000227372.6648.98360930.47180-0.519804.803903.19500K562AARS
TP73-AS1ENSG00000227372.61641.057501955.86620-0.253202.808202.23630K562AGGF1
TP73-AS1ENSG00000227372.61622.572902035.17650-0.326902.732402.08370K562AKAP8L
TP73-AS1ENSG00000227372.61663.501502500.33740-0.587906.882506.02420K562AQR
TP73-AS1ENSG00000227372.61924.233201626.573200.242302.628701.45090K562DDX21
TP73-AS1ENSG00000227372.61709.006202189.93910-0.357704.741603.54540K562DKC1
TP73-AS1ENSG00000227372.61012.322701317.66530-0.380302.958502.01470K562EFTUD2
TP73-AS1ENSG00000227372.6989.624201347.98650-0.445904.389003.35650K562EIF4A3
TP73-AS1ENSG00000227372.6589.41990861.95330-0.548304.645203.53330K562FMR1
TP73-AS1ENSG00000227372.61175.540501401.83830-0.254002.273301.71600K562FXR1
TP73-AS1ENSG00000227372.6666.123101042.68030-0.646404.821103.82740K562G3BP2
TP73-AS1ENSG00000227372.61842.629202413.10040-0.389104.177303.25180K562GRSF1
TP73-AS1ENSG00000227372.61371.693001017.861400.430304.243203.52020K562HNRNPC
TP73-AS1ENSG00000227372.6466.34460690.62310-0.566503.337502.30230K562KRR1
TP73-AS1ENSG00000227372.61205.235201483.88940-0.300102.562601.75330K562MAGOH
TP73-AS1ENSG00000227372.61974.481902419.52520-0.293202.421901.57850K562MBNL1
TP73-AS1ENSG00000227372.61311.094901695.91470-0.371302.070201.33010K562NAA15
TP73-AS1ENSG00000227372.61055.715401346.13210-0.350603.454602.06980K562NCBP2
TP73-AS1ENSG00000227372.61300.237301002.359000.375302.740101.33090K562NUSAP1
TP73-AS1ENSG00000227372.61033.444701450.67580-0.489305.951503.88570K562PCBP1
TP73-AS1ENSG00000227372.6777.697001282.24120-0.721408.390207.08070K562PRPF8
TP73-AS1ENSG00000227372.61121.301201441.71970-0.362603.544302.80380K562PTBP1
TP73-AS1ENSG00000227372.62090.521403334.27630-0.6735010.498508.89490K562PUF60
TP73-AS1ENSG00000227372.62932.942603546.82980-0.274202.985601.87310K562PUM1
TP73-AS1ENSG00000227372.62911.162303474.88090-0.255403.342902.28670K562PUM2
TP73-AS1ENSG00000227372.61436.354402018.27230-0.490704.852204.15910K562PUS1
TP73-AS1ENSG00000227372.61386.544301966.55560-0.504207.688906.73040K562RBM15
TP73-AS1ENSG00000227372.61003.724401306.07380-0.379902.388501.63150K562RPS19
TP73-AS1ENSG00000227372.6788.106301397.63950-0.826503.823202.29190K562SNRNP200
TP73-AS1ENSG00000227372.6906.307301413.40840-0.641109.206707.92650K562SRSF1
TP73-AS1ENSG00000227372.6898.328701241.42730-0.466703.473402.32160K562SUPV3L1
TP73-AS1ENSG00000227372.6878.279301160.67460-0.402203.730402.77770K562SYNCRIP
TP73-AS1ENSG00000227372.6553.633501044.18370-0.9154015.8118013.85940K562U2AF2
TP73-AS1ENSG00000227372.62112.614801795.519400.234502.799901.94860K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TP73-AS1 is not available on ENCORE database.





8 RBPs can affect the splicing of TP73-AS1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETP73-AS1ENSG00000227372.6chr1-365899336590813656796365695136593673659422-0.119000.000540.07315excludedK562LARP4
SETP73-AS1ENSG00000227372.6chr1-3658993365908136567963656951365936736594220.186000.000000.00098includedK562APOBEC3C
A3SSTP73-AS1ENSG00000227372.6chr1-3659624365986436596243659754366217036638860.052000.001670.01098longerK562AQR
A3SSTP73-AS1ENSG00000227372.6chr1-3659367365954736593673659475365962436597540.303000.001820.07699longerK562PUS1
A3SSTP73-AS1ENSG00000227372.6chr1-3659367365952136593673659475365962436597540.273000.000790.09679longerK562UTP18
A3SSTP73-AS1ENSG00000227372.6chr1-3659367365954736593673659475365962436597540.303000.000760.08106longerK562RBM15
A3SSTP73-AS1ENSG00000227372.6chr1-365936736595213659367365947536596243659754-0.331000.000040.01033shorterK562PRPF8
RITP73-AS1ENSG00000227372.6chr1-365254736569513652547365441836567963656951-0.326000.002940.05797excludedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TP73-AS1 is not avaliable on ENCORE database.