TMOD2

General Information

Gene Name       : TMOD2
Gene ID             : ENSG00000128872.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMOD2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMOD2ENSG00000128872.910.117.148.62ENCSR000AEF
HepG2TMOD2ENSG00000128872.90.020.010.01ENCSR985KAT
K562TMOD2ENSG00000128872.91.972.001.98ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMOD2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMOD2 RNA is bound by 2 proteins.  







eCLIP assay for TMOD2 is not avaliable on ENCORE database.





2 proteins are bound to TMOD2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr155205927052059285+5'-UTR,intron-Distal,intron-Proximal4.793324.90095K562PTBP1
chr155205926752059270+5'-UTR,intron-Distal,intron-Proximal4.793324.90095K562PTBP1
chr155205875952058764+5'-UTR,CDS4.793324.90095K562PTBP1
chr155207491752075028+CDS,intron-Distal,intron-Proximal4.275883.43980K562ZNF622
chr155209858352098713+CDS4.234653.53690K562ZNF622
chr155206590652065982+CDS,intron-Distal,intron-Proximal4.202103.87582K562ZNF622
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMOD2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMOD2 is not available on ENCORE database.

  • 93 RBPs can affect the levels of TMOD2.  








The Knockdown/knockout RNA-Seq assay for TMOD2 is not available on ENCORE database.





93 RBPs can affect the gene expression of TMOD2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMOD2ENSG00000128872.572.050604.337604.0539011.5927010.57690HepG2AKAP1
TMOD2ENSG00000128872.521.344004.231802.334402.592501.84460HepG2CALR
TMOD2ENSG00000128872.588.6771018.608502.252507.782906.18690HepG2DDX59
TMOD2ENSG00000128872.532.194103.563403.175405.031604.22030HepG2DDX6
TMOD2ENSG00000128872.5129.244304.913404.7171028.3642026.77710HepG2ETF1
TMOD2ENSG00000128872.542.284108.218702.363004.635703.05060HepG2HSPD1
TMOD2ENSG00000128872.553.800203.612503.8964010.241109.02980HepG2IGF2BP2
TMOD2ENSG00000128872.522.578503.380102.739702.313101.42130HepG2IGF2BP3
TMOD2ENSG00000128872.533.921708.332702.025303.074802.19630HepG2LARP4
TMOD2ENSG00000128872.518.475703.034102.606202.497901.97390HepG2PTBP1
TMOD2ENSG00000128872.5175.214604.106405.4150042.1222040.57170HepG2RBM22
TMOD2ENSG00000128872.518.993603.123602.604102.555901.96290HepG2RPS19
TMOD2ENSG00000128872.549.734104.637503.422708.828108.07150HepG2SRFBP1
TMOD2ENSG00000128872.513.564402.682302.338201.985801.50380HepG2SRSF9
TMOD2ENSG00000128872.514.832602.964102.323001.954001.46880HepG2TAF15
TMOD2ENSG00000128872.528.587209.200201.635502.472901.94770HepG2ZNF622
TMOD2ENSG00000128872.5704.39720397.143200.826608.371006.27130K562ABCF1
TMOD2ENSG00000128872.5514.28520669.95980-0.381503.133002.15740K562ATP5C1
TMOD2ENSG00000128872.5498.67010262.274600.9269010.849808.22270K562BCCIP
TMOD2ENSG00000128872.5385.97820253.417300.606903.879202.72760K562BCLAF1
TMOD2ENSG00000128872.5527.22720276.625600.930408.169405.73160K562BUD13
TMOD2ENSG00000128872.5249.31560138.760000.845304.985203.47590K562CCAR1
TMOD2ENSG00000128872.5331.59920459.91550-0.471902.897601.58400K562CIRBP
TMOD2ENSG00000128872.5579.66960364.343600.669804.702202.73800K562CKAP4
TMOD2ENSG00000128872.5817.51740338.237901.2731010.647908.56870K562CNOT7
TMOD2ENSG00000128872.5678.82150382.482000.8275011.217909.00350K562CPEB4
TMOD2ENSG00000128872.5329.72470151.552301.121308.301705.34910K562YBX3
TMOD2ENSG00000128872.5390.78710192.254701.023309.672107.54030K562CSTF2
TMOD2ENSG00000128872.5752.10840563.670500.416003.356602.28140K562CELF1
TMOD2ENSG00000128872.5425.63850222.256100.9373011.410508.89060K562DDX27
TMOD2ENSG00000128872.5907.47030395.799101.1970028.0680026.20190K562DDX47
TMOD2ENSG00000128872.5478.61700263.228900.862506.952104.39610K562DDX51
TMOD2ENSG00000128872.5270.55100141.139800.938704.177502.91730K562EIF3A
TMOD2ENSG00000128872.5326.22800151.462901.106803.873901.48650K562EIF4G1
TMOD2ENSG00000128872.5809.56800458.478300.8202012.5076010.58200K562EIF4G2
TMOD2ENSG00000128872.5215.37310307.59860-0.514202.976201.62340K562EWSR1
TMOD2ENSG00000128872.5372.18340216.942400.778604.812002.55100K562FAM120A
TMOD2ENSG00000128872.5147.15470285.47620-0.956006.570505.22390K562FIP1L1
TMOD2ENSG00000128872.5360.37760220.941500.705704.344902.88020K562FKBP4
TMOD2ENSG00000128872.5532.60220243.997401.1261012.0755010.20560K562FMR1
TMOD2ENSG00000128872.5394.86590206.823900.932907.284305.72620K562FTO
TMOD2ENSG00000128872.5223.87360366.46350-0.711005.622904.80340K562FXR1
TMOD2ENSG00000128872.5569.93230366.815400.635603.942003.06200K562G3BP2
TMOD2ENSG00000128872.5545.60910231.233201.2384019.1769016.69280K562GLRX3
TMOD2ENSG00000128872.5371.47520228.912300.698404.608103.58730K562GPKOW
TMOD2ENSG00000128872.5800.41100338.565101.2412018.5107016.48550K562GRSF1
TMOD2ENSG00000128872.5574.24440342.640300.744902.945001.67820K562HNRNPA2B1
TMOD2ENSG00000128872.5635.87920316.624801.005907.124204.69270K562HNRNPAB
TMOD2ENSG00000128872.5507.77150254.523600.9963010.423409.32410K562HNRNPC
TMOD2ENSG00000128872.5156.96700234.80600-0.581002.343101.49080K562HNRNPM
TMOD2ENSG00000128872.5968.46540309.026701.6479012.735009.72180K562ILF2
TMOD2ENSG00000128872.5226.04230144.979100.640603.026701.46010K562ILF3
TMOD2ENSG00000128872.5416.29170195.497701.090303.710502.61150K562KRR1
TMOD2ENSG00000128872.5391.92020258.126000.602403.716301.95950K562LIN28B
TMOD2ENSG00000128872.5715.92100488.702500.550704.643303.17600K562MSI2
TMOD2ENSG00000128872.5932.41480243.110301.9393062.0685059.19450K562MTPAP
TMOD2ENSG00000128872.5506.82020351.862600.526404.054502.54850K562NCBP2
TMOD2ENSG00000128872.5806.40020501.474200.685203.979402.17020K562NOL12
TMOD2ENSG00000128872.5159.85320240.16690-0.587302.548201.32150K562NONO
TMOD2ENSG00000128872.5473.27730270.124600.809009.560708.28460K562NSUN2
TMOD2ENSG00000128872.5554.72290324.949800.771504.011202.50410K562PABPC1
TMOD2ENSG00000128872.5533.29990301.065400.824805.134702.67000K562PPIL4
TMOD2ENSG00000128872.5662.56160246.780901.4247011.133107.99230K562PRPF6
TMOD2ENSG00000128872.5149.80230237.12480-0.662602.980002.20200K562PRPF8
TMOD2ENSG00000128872.51010.30840521.341900.9544018.0398015.68750K562PUM2
TMOD2ENSG00000128872.5248.79220420.19270-0.756106.171304.85080K562RBM22
TMOD2ENSG00000128872.5631.99130368.632500.777602.873601.30490K562RBM39
TMOD2ENSG00000128872.5502.28080241.518301.056308.890907.41280K562RPS19
TMOD2ENSG00000128872.5742.94480301.855801.2993011.492208.05290K562RPS3A
TMOD2ENSG00000128872.5506.10360319.083000.665404.454002.16450K562SAFB2
TMOD2ENSG00000128872.5586.20680273.990101.097204.507902.85650K562SF1
TMOD2ENSG00000128872.5395.54520266.533300.569404.377603.36940K562SF3A3
TMOD2ENSG00000128872.5628.33690217.752601.5287018.9813016.42320K562SF3B1
TMOD2ENSG00000128872.5360.88610152.816601.2396011.954109.54450K562SLBP
TMOD2ENSG00000128872.5505.47350316.685900.674503.608001.59350K562SMN1
TMOD2ENSG00000128872.5537.89560273.068100.9780013.9121012.03030K562SRPK2
TMOD2ENSG00000128872.5276.60470429.52460-0.634904.721203.80190K562SRSF1
TMOD2ENSG00000128872.5366.96380263.531800.477603.022601.67490K562SSB
TMOD2ENSG00000128872.5650.30820374.566000.795807.520405.22380K562SSRP1
TMOD2ENSG00000128872.5752.36580342.591101.1348011.715609.12590K562STAU1
TMOD2ENSG00000128872.5776.22760301.595401.363809.309606.46360K562STIP1
TMOD2ENSG00000128872.5757.29490436.470900.7949010.674208.05530K562SUCLG1
TMOD2ENSG00000128872.5892.50670376.415801.245407.013004.42200K562SUPT6H
TMOD2ENSG00000128872.5725.64100382.591800.9233011.254008.27700K562TBRG4
TMOD2ENSG00000128872.5331.27550219.496100.593702.300901.45340K562TIAL1
TMOD2ENSG00000128872.5619.09940333.960900.890408.611206.09050K562TRIP6
TMOD2ENSG00000128872.5874.83160563.963400.633307.073304.93720K562UBE2L3
TMOD2ENSG00000128872.5648.63340242.970801.4165019.1163016.48060K562UCHL5
TMOD2ENSG00000128872.5409.04460286.418200.514003.864403.02720K562UPF1
TMOD2ENSG00000128872.5773.18700329.574501.2301010.894808.71650K562UTP3
TMOD2ENSG00000128872.5657.80210245.080001.4243024.4711022.01870K562WDR3
TMOD2ENSG00000128872.5810.50800254.848301.6691048.4565045.86340K562WDR43
TMOD2ENSG00000128872.51004.33890415.476201.2733025.1136021.87970K562WRN
TMOD2ENSG00000128872.5713.44160320.216901.155606.165803.55300K562XPO5
TMOD2ENSG00000128872.5522.92580394.760700.405502.648401.80690K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMOD2 is not available on ENCORE database.





1 RBPs can affect the splicing of TMOD2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXETMOD2ENSG00000128872.5chr15+5207491752075025520903935209053752073240520733715209857352098718-0.485000.000080.069332includedK562IGF2BP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TMOD2 is not avaliable on ENCORE database.