TMEM167A

General Information

Gene Name       : TMEM167A
Gene ID             : ENSG00000174695.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMEM167A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMEM167AENSG00000174695.941.4936.1838.84ENCSR000AEF
HepG2TMEM167AENSG00000174695.931.0478.0954.56ENCSR985KAT
K562TMEM167AENSG00000174695.946.5158.5852.55ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMEM167A is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMEM167A RNA is bound by 13 proteins.  







eCLIP assay for TMEM167A is not avaliable on ENCORE database.





13 proteins are bound to TMEM167A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr58235014882350212-3'-UTR,intron-Distal3.435863.68481HepG2HNRNPM
chr58235068782350736-3'-UTR,intron-Distal3.699874.06897HepG2FAM120A
chr58235035082350402-3'-UTR,intron-Distal3.668109.20102K562FAM120A
chr58234935382349438-3'-UTR,intron-Distal3.199438.21468K562UPF1
chr58235257582352659-3'-UTR,intron-Distal,intron-Proximal4.611655.80303K562IGF2BP1
chr58234919982349292-3'-UTR,intron-Distal3.315827.06138K562LIN28B
chr58235265982352750-3'-UTR,intron-Distal,intron-Proximal4.140946.74427K562IGF2BP1
chr58235135382351446-3'-UTR,intron-Distal3.216356.77513HepG2FUBP3
chr58235266582352755-3'-UTR,intron-Distal,intron-Proximal3.035263.95970K562CPSF6
chr58235077382350819-3'-UTR,intron-Distal4.541057.76684K562FAM120A
chr58237313982373173-5'-UTR,CDS,intron-Distal4.423984.17587HepG2DDX3X
chr58237313982373201-5'-UTR,CDS,intron-Distal,intron-Proximal4.7166321.55280K562DDX3X
chr58237296982373147-5'-UTR,CDS,intron-Distal3.058816.82400K562PRPF8
chr58237313882373190-5'-UTR,CDS,intron-Distal,intron-Proximal4.710465.59726K562GEMIN5
chr58236088582360924-CDS,intron-Distal3.723217.50590K562DDX3X
chr58236092482360937-CDS,intron-Distal,intron-Proximal4.5985915.98151K562DDX3X
chr58236008682360093-intron-Distal5.32252400.00000HepG2DKC1
chr58236009482360112-intron-Distal6.02850400.00000HepG2DKC1
chr58236002382360052-intron-Distal5.31078400.00000HepG2DKC1
chr58236025982360368-intron-Distal3.231484.10408K562KHSRP
chr58235932082359458-intron-Distal3.626424.70224K562KHSRP
chr58236005482360086-intron-Distal5.28452400.00000HepG2DKC1
chr58237299082373097-intron-Distal3.392175.58907HepG2EFTUD2
chr58236011282360155-intron-Distal6.37562400.00000HepG2DKC1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMEM167A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMEM167A is not available on ENCORE database.

  • 95 RBPs can affect the levels of TMEM167A.  








The Knockdown/knockout RNA-Seq assay for TMEM167A is not available on ENCORE database.





95 RBPs can affect the gene expression of TMEM167A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMEM167AENSG00000174695.51383.247801875.89960-0.439504.643603.28550HepG2AATF
TMEM167AENSG00000174695.52068.073202665.79200-0.366302.608901.69420HepG2ABCF1
TMEM167AENSG00000174695.52986.341302590.958800.204802.787902.17800HepG2ACO1
TMEM167AENSG00000174695.53279.129702669.615800.296602.649602.06270HepG2BOP1
TMEM167AENSG00000174695.53122.227902289.178600.447602.619301.86830HepG2CALR
TMEM167AENSG00000174695.54493.172503295.299300.447204.437703.46950HepG2CIRBP
TMEM167AENSG00000174695.52176.031302590.60910-0.251602.341801.72170HepG2CKAP4
TMEM167AENSG00000174695.51704.090302396.36380-0.4918012.2796010.78100HepG2DDX19B
TMEM167AENSG00000174695.51336.040802257.99890-0.7571018.0964015.66010HepG2DDX1
TMEM167AENSG00000174695.52578.665204015.80270-0.639103.627902.92200HepG2DDX3X
TMEM167AENSG00000174695.51741.024102196.11340-0.335002.917101.58930HepG2DDX47
TMEM167AENSG00000174695.51673.757502783.17150-0.733604.742403.47290HepG2DDX59
TMEM167AENSG00000174695.52342.666303448.80240-0.557903.518102.82900HepG2DDX6
TMEM167AENSG00000174695.51935.379302478.90070-0.357105.812804.89650HepG2DKC1
TMEM167AENSG00000174695.51731.603302214.09470-0.354604.892203.98070HepG2DNAJC21
TMEM167AENSG00000174695.51971.466701570.397900.328002.506401.45070HepG2EFTUD2
TMEM167AENSG00000174695.51912.221201529.172100.322402.282501.45340HepG2EIF3D
TMEM167AENSG00000174695.52242.451903665.27450-0.708804.669903.84250HepG2EIF4A3
TMEM167AENSG00000174695.54970.596703567.875500.478302.174101.56230HepG2EIF4B
TMEM167AENSG00000174695.53015.969803576.27130-0.245803.768102.81710HepG2EIF4G1
TMEM167AENSG00000174695.53399.864304731.08830-0.4767011.5259010.43630HepG2ETF1
TMEM167AENSG00000174695.51963.739402532.01910-0.366703.645002.68660HepG2EWSR1
TMEM167AENSG00000174695.52097.898702691.95810-0.359702.178301.49130HepG2FIP1L1
TMEM167AENSG00000174695.52653.904903696.86610-0.478202.798402.10260HepG2FXR1
TMEM167AENSG00000174695.52714.589102235.306500.280202.283601.69150HepG2HNRNPA1
TMEM167AENSG00000174695.51494.435602486.36780-0.7344012.1126010.75420HepG2HNRNPC
TMEM167AENSG00000174695.51944.313102598.20480-0.418307.518206.41140HepG2HNRNPF
TMEM167AENSG00000174695.51942.507502651.52470-0.448903.933803.19630HepG2HNRNPLL
TMEM167AENSG00000174695.51621.873902558.50210-0.6576012.1404010.73090HepG2IGF2BP1
TMEM167AENSG00000174695.52232.333202522.95050-0.176602.243401.57470HepG2ILF2
TMEM167AENSG00000174695.51815.645602368.59400-0.383508.333706.63970HepG2KIF1C
TMEM167AENSG00000174695.52580.547103698.15120-0.519103.206702.50120HepG2MAGOH
TMEM167AENSG00000174695.52443.623603719.05130-0.605903.557402.84970HepG2MATR3
TMEM167AENSG00000174695.52354.744703806.82010-0.693004.798203.97660HepG2NCBP2
TMEM167AENSG00000174695.51818.966603390.97620-0.898606.565205.46220HepG2PABPC4
TMEM167AENSG00000174695.52856.544502444.803800.224502.781601.93120HepG2PARN
TMEM167AENSG00000174695.52334.366303066.71870-0.393707.785106.84950HepG2PCBP1
TMEM167AENSG00000174695.51675.696702202.97910-0.394705.767004.73600HepG2PPIL4
TMEM167AENSG00000174695.52642.105402050.808400.365403.106502.25510HepG2PRPF8
TMEM167AENSG00000174695.52477.212003120.48350-0.333105.538004.81980HepG2PTBP1
TMEM167AENSG00000174695.52955.939603642.52300-0.301306.079005.27020HepG2PUM1
TMEM167AENSG00000174695.51934.290202639.09090-0.4482010.264509.20620HepG2PUS1
TMEM167AENSG00000174695.54026.227603379.597900.252502.835302.20450HepG2QKI
TMEM167AENSG00000174695.53215.097202288.904900.490102.547201.87030HepG2RAVER1
TMEM167AENSG00000174695.57701.788103954.327700.9617041.8669040.32000HepG2RBM22
TMEM167AENSG00000174695.52391.233703067.18830-0.359204.094303.28760HepG2RBM25
TMEM167AENSG00000174695.53063.285203472.81310-0.181002.087801.60400HepG2NELFE
TMEM167AENSG00000174695.52586.881903234.42710-0.322305.573804.73660HepG2RECQL
TMEM167AENSG00000174695.52011.019002798.72120-0.476805.667704.74090HepG2RPLP0
TMEM167AENSG00000174695.51128.756101487.92030-0.398603.922103.20230HepG2RPS19
TMEM167AENSG00000174695.53844.014502489.633100.626604.496302.52960HepG2RTF1
TMEM167AENSG00000174695.51033.704601493.40960-0.530805.224703.94390HepG2SERBP1
TMEM167AENSG00000174695.51639.607703040.48270-0.890902.714301.38040HepG2SF1
TMEM167AENSG00000174695.51338.403502725.97190-1.0263011.9397010.48080HepG2SF3A3
TMEM167AENSG00000174695.51910.053402624.58020-0.458504.544003.65720HepG2SF3B1
TMEM167AENSG00000174695.52919.895703290.02280-0.172202.513201.84020HepG2SLBP
TMEM167AENSG00000174695.55031.014904466.291200.171702.450001.96840HepG2SRFBP1
TMEM167AENSG00000174695.54558.085103391.091000.4266010.732909.93370HepG2SRSF1
TMEM167AENSG00000174695.52905.896103387.92870-0.221403.124502.46490HepG2SRSF5
TMEM167AENSG00000174695.52092.719902552.60830-0.286603.835403.03600HepG2SRSF7
TMEM167AENSG00000174695.52587.363403877.83940-0.5838018.0472016.98080HepG2SSB
TMEM167AENSG00000174695.51017.067601798.64570-0.822508.060106.09140HepG2STAU1
TMEM167AENSG00000174695.53125.575303853.09840-0.301906.595105.70690HepG2SUCLG1
TMEM167AENSG00000174695.5580.031401818.29780-1.6484029.0917026.47890HepG2SUPT6H
TMEM167AENSG00000174695.51798.775702645.46440-0.556502.272201.65120HepG2SUPV3L1
TMEM167AENSG00000174695.53475.142102583.981300.427404.710303.79850HepG2TARDBP
TMEM167AENSG00000174695.51603.763102399.98770-0.5816010.377609.51630HepG2TIAL1
TMEM167AENSG00000174695.52746.805002417.517100.184102.195901.56180HepG2UPF1
TMEM167AENSG00000174695.52640.389102334.022700.177801.866801.35420HepG2UTP3
TMEM167AENSG00000174695.51750.260602316.62450-0.404502.411101.39770HepG2XPO5
TMEM167AENSG00000174695.51686.286202604.16070-0.627002.882902.14320HepG2XRN2
TMEM167AENSG00000174695.52267.686902658.81060-0.229603.739803.12930HepG2ZNF622
TMEM167AENSG00000174695.52915.085903791.73450-0.379305.503903.53000K562BCCIP
TMEM167AENSG00000174695.53119.284803663.96890-0.232203.287902.23880K562BCLAF1
TMEM167AENSG00000174695.51973.561403367.71510-0.771006.893705.64790K562CPSF6
TMEM167AENSG00000174695.52258.978302779.66580-0.299203.877802.60010K562CSTF2
TMEM167AENSG00000174695.52559.666903465.35170-0.437005.956604.35680K562DDX3X
TMEM167AENSG00000174695.52852.389405309.21010-0.8963039.4620037.28730K562DDX47
TMEM167AENSG00000174695.52060.351902900.46140-0.493403.366701.94730K562EEF2
TMEM167AENSG00000174695.52882.770603885.32010-0.430605.936604.94270K562EIF2S2
TMEM167AENSG00000174695.52406.452103499.14510-0.5401011.366409.73060K562EIF3G
TMEM167AENSG00000174695.52198.865503620.39930-0.7194012.6946010.89240K562EIF4A3
TMEM167AENSG00000174695.52607.762503260.32980-0.322204.201202.72740K562EIF4B
TMEM167AENSG00000174695.52263.370203160.21570-0.481608.074805.60980K562EWSR1
TMEM167AENSG00000174695.52541.895503416.15710-0.426504.732603.60090K562FIP1L1
TMEM167AENSG00000174695.52224.424502903.96530-0.384602.912601.97320K562FTO
TMEM167AENSG00000174695.52937.956503765.05650-0.357906.014305.17290K562FXR1
TMEM167AENSG00000174695.55954.334404241.741900.489203.576602.74780K562G3BP2
TMEM167AENSG00000174695.54169.999205177.86620-0.312302.714201.96400K562GRSF1
TMEM167AENSG00000174695.51555.874302822.81320-0.8594018.4932017.02980K562HNRNPC
TMEM167AENSG00000174695.53595.475304798.21200-0.416305.468603.92540K562HNRNPL
TMEM167AENSG00000174695.53701.405504631.73300-0.323503.135302.29010K562HSPD1
TMEM167AENSG00000174695.52051.228502862.67440-0.480904.741802.71500K562LIN28B
TMEM167AENSG00000174695.53581.813604978.80740-0.475106.752605.41290K562MAGOH
TMEM167AENSG00000174695.53804.542804968.93010-0.385204.916203.64440K562MATR3
TMEM167AENSG00000174695.52081.318303138.59440-0.592605.401304.15140K562METAP2
TMEM167AENSG00000174695.59548.847307537.574300.341103.351501.68840K562NOL12
TMEM167AENSG00000174695.53244.458004430.17360-0.449405.810104.38060K562PCBP2
TMEM167AENSG00000174695.51963.134802530.90840-0.366502.796101.88670K562PSIP1
TMEM167AENSG00000174695.52810.146504837.11350-0.7835018.4468016.80670K562PTBP1
TMEM167AENSG00000174695.53232.307604639.01600-0.521306.988105.58260K562RBM22
TMEM167AENSG00000174695.53441.175204521.54190-0.393903.722002.02940K562RBM34
TMEM167AENSG00000174695.53809.278904881.63480-0.357803.247002.05300K562NELFE
TMEM167AENSG00000174695.53019.460804309.17700-0.513107.060804.27440K562RECQL
TMEM167AENSG00000174695.51761.441102778.52350-0.657603.916202.94090K562RPS19
TMEM167AENSG00000174695.52152.483503029.15450-0.492904.982203.58680K562RPS3
TMEM167AENSG00000174695.52457.863303859.64870-0.6511017.2430015.34920K562SF3A3
TMEM167AENSG00000174695.53398.045104412.35780-0.376805.182803.99210K562SF3B4
TMEM167AENSG00000174695.51780.386702188.82960-0.298002.358601.42960K562SRFBP1
TMEM167AENSG00000174695.53062.384803954.28330-0.368805.850304.55560K562SRPK2
TMEM167AENSG00000174695.53713.297404741.81920-0.352704.066903.21630K562SRSF1
TMEM167AENSG00000174695.53673.756004477.88330-0.285602.431901.45640K562SRSF5
TMEM167AENSG00000174695.51540.840502641.38150-0.777606.381804.79300K562SUPV3L1
TMEM167AENSG00000174695.53347.538904799.38540-0.519706.344905.23330K562TARDBP
TMEM167AENSG00000174695.53500.489304629.45590-0.403305.571304.34460K562TIA1
TMEM167AENSG00000174695.51823.472502434.33360-0.416803.530002.46840K562TIAL1
TMEM167AENSG00000174695.53759.459704542.03270-0.272802.345101.35670K562TRA2A
TMEM167AENSG00000174695.52407.328003209.78520-0.415003.172001.87850K562UTP3
TMEM167AENSG00000174695.52190.583902845.77190-0.377502.544701.39950K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMEM167A is not available on ENCORE database.





2 RBPs can affect the splicing of TMEM167A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETMEM167AENSG00000174695.5chr5-823608268236093682348664823529738237313982373315-0.115000.000000.00000excludedK562PUS1
SETMEM167AENSG00000174695.5chr5-823608268236093682348664823529738237313982373315-0.064000.000000.00049excludedK562UTP18

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TMEM167A is not avaliable on ENCORE database.